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Tan0012864 (gene) of Snake gourd v1 genome

Gene IDTan0012864
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG01:78443521..78443838
RNA-Seq ExpressionTan0012864
SyntenyTan0012864
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-3374.29Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNMI+HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-3373.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-3373.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-3373.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
XP_038876370.1 uncharacterized protein LOC120068812, partial [Benincasa hispida]2.1e-3574.29Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TAKEIM SLQALFGQPSSS  +DA+K+VYN RM+EG +VREHVL+M++HFN+ EVNR V++EKSQV FIMESL KSF QFR NA+MNKI+YNLTT+LN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQI+
Subjt:  ELQIF
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein5.6e-3473.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
A0A5A7TU93 Gag/pol protein5.6e-3473.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
A0A5A7TWB9 Gag/pol protein5.6e-3473.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
A0A5A7V4M1 Gag/pol protein5.6e-3473.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
A0A5D3CPJ6 Gag/pol protein5.6e-3473.33Show/hide
Query:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN
        M+TA+EIM SLQ +FGQ S  +++DALKY+YN+RM EG SVREHVLNM++HFNVAE+N  VIDE SQVSFI+ESL +SFLQFR+NAVMNKI Y LTTLLN
Subjt:  MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLN

Query:  ELQIF
        ELQ F
Subjt:  ELQIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCGAAGGAGATTATGGGATCATTGCAGGCGTTGTTTGGACAACCGTCCTCATCGGTTCGTTATGATGCTCTCAAATACGTTTACAACTCTCGTATGAGGGA
GGGAACTTCTGTTAGGGAGCATGTCCTTAACATGATAATCCACTTCAACGTGGCAGAAGTAAACAGGGTTGTCATAGATGAGAAAAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCTGAAGAGTTTCCTGCAGTTTCGCACCAATGCGGTGATGAACAAGATAGAGTATAACCTGACTACTCTCCTCAACGAGCTCCAGATTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCGAAGGAGATTATGGGATCATTGCAGGCGTTGTTTGGACAACCGTCCTCATCGGTTCGTTATGATGCTCTCAAATACGTTTACAACTCTCGTATGAGGGA
GGGAACTTCTGTTAGGGAGCATGTCCTTAACATGATAATCCACTTCAACGTGGCAGAAGTAAACAGGGTTGTCATAGATGAGAAAAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCTGAAGAGTTTCCTGCAGTTTCGCACCAATGCGGTGATGAACAAGATAGAGTATAACCTGACTACTCTCCTCAACGAGCTCCAGATTTTTTAG
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQALFGQPSSSVRYDALKYVYNSRMREGTSVREHVLNMIIHFNVAEVNRVVIDEKSQVSFIMESLLKSFLQFRTNAVMNKIEYNLTTLLNELQIF