; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012875 (gene) of Snake gourd v1 genome

Gene IDTan0012875
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA-binding protein pno1-like
Genome locationLG07:7779959..7782305
RNA-Seq ExpressionTan0012875
SyntenyTan0012875
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042585.1 RNA-binding protein pno1-like [Cucumis melo var. makuwa]1.5e-11596.88Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSMEVE VSSK++TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_004145908.1 RNA-binding protein pno1 [Cucumis sativus]1.8e-11697.32Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSMEVE VSSK++TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008437547.1 PREDICTED: RNA-binding protein pno1-like [Cucumis melo]1.5e-11596.88Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSMEVE VSSK++TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022995381.1 RNA-binding protein pno1-like [Cucurbita maxima]3.4e-11597.32Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVEAV SKSITEVG LPPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_038874451.1 RNA-binding protein pno1-like [Benincasa hispida]5.2e-11697.32Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVEAVSSK+ TEVGTLPPKP+FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0KQC5 KH domain-containing protein8.7e-11797.32Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSMEVE VSSK++TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3AUA6 RNA-binding protein pno1-like7.4e-11696.88Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSMEVE VSSK++TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A5D3C450 RNA-binding protein pno1-like7.4e-11696.88Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVPVSMEVE VSSK++TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIY+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1DX80 RNA-binding protein pno1-like2.8e-11596.43Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVEA+S+K ITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTR DTPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1K1S8 RNA-binding protein pno1-like1.6e-11597.32Show/hide
Query:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEVP+SMEVEAV SKSITEVG LPPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno12.6e-6560.71Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TP+ E +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF+V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno13.3e-6567.42Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF+V DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO12.8e-6458.57Show/hide
Query:  SSKSITEVGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML
        +++S    G  P K P F PL    +  G+ + RKV VP +RY+PLK+ WM+I+TPI E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+L
Subjt:  SSKSITEVGTLPPK-PQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFML

Query:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR
        GF V DA+AL+R+D+L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +R
Subjt:  GFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLR

Query:  AVTARLAERF
        AV +R AERF
Subjt:  AVTARLAERF

Q6VBQ6 RNA-binding protein PNO18.2e-6460.2Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD
        +P F P+   ++  G  + RKV+VP HRY+PLK+ W++I+TPI E +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF V DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        EL++ESF++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q9VR89 RNA-binding protein pno13.0e-6665.78Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TP+ E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF+V DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein4.2e-9580.75Show/hide
Query:  MEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV
        MEVE  +  ++     LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++IYTPIY+QMK+DIRMNLKARKVELKTRADTPDISNLQK ADFV
Subjt:  MEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFV

Query:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV
        HAFMLGFD+ DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPAGKV
Subjt:  HAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKV

Query:  YSKLRAVTARLAE
        YSKLR+V+ARL E
Subjt:  YSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTACTGAGGTCCCTGTTTCCATGGAAGTGGAAGCAGTTTCAAGTAAATCAATAACTGAAGTCGGCACCTTGCCGCCAAAACCACAGTTTGATCCTCTAAAGCC
TCATGAAATGAATGATGGCCGAGTTCAGTTCCGGAAGGTATCTGTTCCTCCACATCGGTATTCTCCCCTCAAGAAAGCATGGATGGAGATCTACACCCCAATATATGAGC
AAATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACCAGAGCAGACACACCTGATATCAGTAACTTGCAAAAGTGTGCTGATTTTGTTCAT
GCCTTCATGCTCGGTTTTGATGTTATCGATGCCATTGCACTCTTACGGGTGGATGAACTCTATGTAGAATCTTTTGAGATTAAAGATGTTAAAACACTTCGAGGTGAGCA
CTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAAACAAAGTTTGCCATCGAAAATGCTACAAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATAT
TAGGATCCTTTGCCAACATCAAGATTGCCAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCCCCTGCAGGAAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTG
GCAGAAAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
AATATTTCAGTTTGGATTTCAGTCCCCTCTCCTTTCTCCGTTCTTGTCTCCCTCGCTCTCTCTCGAAGTCGATACCCTCTGTTCTTCTCTCTCAAATTGAATCCTTCAGC
TCCGAATCCCAGTTATATAATTTCACCATTGCACCACCACCCATTCTCTCGATACTCGCTTCTCCAGGCTCACCGTGCGGCGGCTCTTCAATTCAAGCTTCAGCCGACAT
CGCTTTGTTTCGCTCACGTTCTCCCCTCAACATCTCTCCCACCCTCGTCTCTCTGCGTCGCAGTTTCAGACTTCTTGCTAGCATCAAGTAGAAGAGCTGACTTTTATCAA
ACGCAAGGCCTATTTGGGTGGAACTCGGCCCAATTCCATAATGCAGTCTACTGAGGTCCCTGTTTCCATGGAAGTGGAAGCAGTTTCAAGTAAATCAATAACTGAAGTCG
GCACCTTGCCGCCAAAACCACAGTTTGATCCTCTAAAGCCTCATGAAATGAATGATGGCCGAGTTCAGTTCCGGAAGGTATCTGTTCCTCCACATCGGTATTCTCCCCTC
AAGAAAGCATGGATGGAGATCTACACCCCAATATATGAGCAAATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACCAGAGCAGACACACC
TGATATCAGTAACTTGCAAAAGTGTGCTGATTTTGTTCATGCCTTCATGCTCGGTTTTGATGTTATCGATGCCATTGCACTCTTACGGGTGGATGAACTCTATGTAGAAT
CTTTTGAGATTAAAGATGTTAAAACACTTCGAGGTGAGCACTTGTCCCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAAACAAAGTTTGCCATCGAAAATGCTACA
AAGACGAGGATAGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCCAACATCAAGATTGCCAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCCCCTGCAGG
AAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTGGCAGAAAGGTTTTGATCTTGTATGATTTTTGCATACTAGTTACTTGAGGAAGAGTGTAACTTTATTGTGA
AATGCTTGTGCATTGAAGTTTTGTCCTAGATACCAATTATTATTCAATTTTTCTTCACAAAATGGTTATAAGGTGGTTGACAATCGATAGATTGATGGAAAGTAATTTCG
ATATCTGTTTAGAGTAAAAGTGTGTTTAACATTTTGTTCCGTTTATGAGCTTG
Protein sequenceShow/hide protein sequence
MQSTEVPVSMEVEAVSSKSITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
AFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
AERF