; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012892 (gene) of Snake gourd v1 genome

Gene IDTan0012892
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationLG02:67263623..67266118
RNA-Seq ExpressionTan0012892
SyntenyTan0012892
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020712.1 hypothetical protein SDJN02_17399 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5387.16Show/hide
Query:  LSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFS
        LSLNSISQFLL  +  C  KSS LH RP+S EAK+ RSRGAAMITRSNLVEQLREYQIRSKHEWASVS FSS SNI+SSRVDVVIFVIWELIILAFLVFS
Subjt:  LSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFS

Query:  AVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        AVSLYFRHMQLA IL CITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  AVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_004144225.1 uncharacterized protein LOC101213289 [Cucumis sativus]2.8e-5790.73Show/hide
Query:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL
        MLSLNSISQFL+ FLCRC   SSILH   SSLEAKKRRSRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FL
Subjt:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL

Query:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        VFSAVSLYFRHMQLAFIL CITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]9.6e-5890.73Show/hide
Query:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL
        MLSLNSISQFL++FLCRC  +SSILH   SSLEAKKRRSRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FL
Subjt:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL

Query:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        VFSAVSLYFRHMQLAFIL CITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_022951473.1 uncharacterized protein LOC111454282 [Cucurbita moschata]2.2e-5487.84Show/hide
Query:  LSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFS
        LSLNSISQFLL F+  C  KSS LH RP+S EAK+ RSRGAAMITRSNLVEQLREYQIRSKHEWASVS FSS SNI+SSRVDVVIFVIWELIILAFLVFS
Subjt:  LSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFS

Query:  AVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        AVSLYFRHMQLA IL CITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  AVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]7.1e-6192.62Show/hide
Query:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVF
        MLSLNSISQFL++F+CRC  KSSILH RPSSLEAKKR+SRG+AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FLVF
Subjt:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVF

Query:  SAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQLAFIL CITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

TrEMBL top hitse value%identityAlignment
A0A0A0KIH9 Uncharacterized protein1.4e-5790.73Show/hide
Query:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL
        MLSLNSISQFL+ FLCRC   SSILH   SSLEAKKRRSRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FL
Subjt:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL

Query:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        VFSAVSLYFRHMQLAFIL CITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X14.7e-5890.73Show/hide
Query:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL
        MLSLNSISQFL++FLCRC  +SSILH   SSLEAKKRRSRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNI+SSRVDVVIFVIWELIIL+FL
Subjt:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFL

Query:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        VFSAVSLYFRHMQLAFIL CITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1G568 uncharacterized protein LOC1114507866.5e-5282.55Show/hide
Query:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVF
        MLSLNSISQFL+ F+C C  K  ILH RPS    +K  SRGAAMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNI+SSRVDVVIFVIWELIIL+FLVF
Subjt:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVF

Query:  SAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQL F+L CITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1GHS6 uncharacterized protein LOC1114542821.1e-5487.84Show/hide
Query:  LSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFS
        LSLNSISQFLL F+  C  KSS LH RP+S EAK+ RSRGAAMITRSNLVEQLREYQIRSKHEWASVS FSS SNI+SSRVDVVIFVIWELIILAFLVFS
Subjt:  LSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFS

Query:  AVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        AVSLYFRHMQLA IL CITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  AVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1KBR2 uncharacterized protein LOC1114940242.5e-5181.88Show/hide
Query:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVF
        MLSLNSISQFL+ F+C C  K  I H RPS    +K  SRGAAMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNI+SSRVDVVIFVIWELIIL+FLVF
Subjt:  MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVF

Query:  SAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        SAVSLYFRHMQL F+L CITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  SAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20460.1 unknown protein5.5e-4387.74Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN SSSRVDVV+FVIWEL+ILAF VFSAVSLYF+ +QLAFIL C+T+LLL+CMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

AT1G76185.1 unknown protein1.3e-4185.85Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN SSSRVDVV+FVIWEL++LA +VFSAVSLYFR +QLAFIL C+T+LLLLCMK+TKQVR ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILACITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTCTCAATTCCATTTCTCAATTCCTCCTTCAATTCCTCTGTCGCTGCTGTGATAAATCCTCCATTCTCCACCATCGCCCTTCTTCCCTTGAGGCAAAGAAAAG
AAGGTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCTAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCATCTA
CCTCCAATATTTCTTCTTCCAGGGTGGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCGTTCTTGGTCTTTTCAGCAGTTTCTTTATATTTTCGGCATATG
CAGTTGGCTTTTATTTTAGCATGCATCACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATT
GTCCATGTGA
mRNA sequenceShow/hide mRNA sequence
GAAGGGAGGGGGGTGGTAGTAAGAGAAGGTCCACGCAACGCAACAAACCCCCTCAACCTCAACCCCAACCCCAACCTGAACGACTGCGAATTGAACGCTCATGCTCTCTC
TCAATTCCATTTCTCAATTCCTCCTTCAATTCCTCTGTCGCTGCTGTGATAAATCCTCCATTCTCCACCATCGCCCTTCTTCCCTTGAGGCAAAGAAAAGAAGGTCTCGG
GGCGCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCTAAACACGAGTGGGCTTCCGTCTCCTTCTTCTCATCTACCTCCAATAT
TTCTTCTTCCAGGGTGGATGTTGTCATTTTTGTAATATGGGAACTCATTATTCTAGCGTTCTTGGTCTTTTCAGCAGTTTCTTTATATTTTCGGCATATGCAGTTGGCTT
TTATTTTAGCATGCATCACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA
AAAACTGATAGTAGAAGGAGAGATATACTAAACTTTTTTATGTTCTAAATGCCCCGAATTATATTTACAAAAATTAGATTTGGTCCTTTCTCCTCCCACTCTTTGTTATA
TTGGGATCTGTAATCACCAGGAAAGCATGTTTATCAAAAATGAGAAAAAAAAATTTGAAAAAAGGAATGAGATTGATGCGAGTAGTTTAGAAATTTGTGAATGCATTCTT
ATCTGAGAGTTTGGACCATCTTCAATGATTTTCCCTTTCTTAATCCTTTTTAGTTGT
Protein sequenceShow/hide protein sequence
MLSLNSISQFLLQFLCRCCDKSSILHHRPSSLEAKKRRSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNISSSRVDVVIFVIWELIILAFLVFSAVSLYFRHM
QLAFILACITMLLLLCMKVTKQVRLARKKKRRMLLPLSM