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Tan0012906 (gene) of Snake gourd v1 genome

Gene IDTan0012906
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:70084695..70084949
RNA-Seq ExpressionTan0012906
SyntenyTan0012906
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003723 - RNA binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59218.2 hypothetical protein Csa_001496, partial [Cucumis sativus]4.4e-0769.81Show/hide
Query:  MNGGDGFGGSEMMTAVGWNLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRFALF
        M+G DG        A    LTEMAKFGAYAAFGSSLRLYVGTRSAFPLR  LF
Subjt:  MNGGDGFGGSEMMTAVGWNLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRFALF
TrEMBL top hitse value%identityAlignment
A0A0A0LB76 Uncharacterized protein2.1e-0769.81Show/hide
Query:  MNGGDGFGGSEMMTAVGWNLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRFALF
        M+G DG        A    LTEMAKFGAYAAFGSSLRLYVGTRSAFPLR  LF
Subjt:  MNGGDGFGGSEMMTAVGWNLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRFALF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGTGGAGATGGATTTGGTGGATCAGAAATGATGACAGCCGTTGGATGGAATTTGACAGAGATGGCAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCG
TCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTCGCCTTATTCTCTTTTCTTCCCAATCCACGCTTCTCAATTCGCCACGTTTCATCACACCTGCCACGTGTCT
CATCGAATCATCCACTTCAAATTTTGCTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGGTGGAGATGGATTTGGTGGATCAGAAATGATGACAGCCGTTGGATGGAATTTGACAGAGATGGCAAAGTTTGGCGCTTACGCTGCTTTTGGATCTTCCTTGCG
TCTCTACGTTGGCACGAGGTCGGCCTTTCCTCTACGCTTCGCCTTATTCTCTTTTCTTCCCAATCCACGCTTCTCAATTCGCCACGTTTCATCACACCTGCCACGTGTCT
CATCGAATCATCCACTTCAAATTTTGCTTTGGTGA
Protein sequenceShow/hide protein sequence
MNGGDGFGGSEMMTAVGWNLTEMAKFGAYAAFGSSLRLYVGTRSAFPLRFALFSFLPNPRFSIRHVSSHLPRVSSNHPLQILLW