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Tan0012908 (gene) of Snake gourd v1 genome

Gene IDTan0012908
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG07:6434503..6434916
RNA-Seq ExpressionTan0012908
SyntenyTan0012908
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145329.1 transcriptional regulator TAC1 [Cucumis sativus]2.8e-1943.82Show/hide
Query:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTT-------------------STIEETKI-
        +EQSG +QST+ +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   ++VDT K +   T                     +EET I 
Subjt:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTT-------------------STIEETKI-

Query:  HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNSTSSST-SMATTRHFF
         E ++L LFV+ +                     S + S S+HG  VSELDLELRLG EPQNSTSSS+     T HFF
Subjt:  HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNSTSSST-SMATTRHFF

XP_008457447.1 PREDICTED: transcriptional regulator TAC1-like [Cucumis melo]3.1e-1843.02Show/hide
Query:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTI--------------------RNTTSTIEETKI
        +EQSG +QST  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   ++VDT K +                    R+    +EET I
Subjt:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTI--------------------RNTTSTIEETKI

Query:  -HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF
          E ++L LFV+ +                     S + S S+HG  VSELDLELRLG EPQNST S+S     T HFF
Subjt:  -HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF

XP_022141797.1 transcriptional regulator TAC1-like [Momordica charantia]1.2e-1742.44Show/hide
Query:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIV-DTSKTIRN----------------------------TTSTIEETKIHEL
        +S+ECTFCK+GF N +ALGGHM +HRK+ A++KQS S SSLS++   + V D SK I                              T+ST+EET   ++
Subjt:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIV-DTSKTIRN----------------------------TTSTIEETKIHEL

Query:  RELSLF-----------------VQKHSD--MVSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF
        ++L LF                 ++  SD  MV   QHG  VSELDLELRLG EPQNST SST   ++RHFF
Subjt:  RELSLF-----------------VQKHSD--MVSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF

XP_031254022.1 transcriptional regulator TAC1-like [Pistacia vera]6.6e-1337.57Show/hide
Query:  MNSKEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ-STSMSSLSLNEMN------------IIVDTSKTIRNT-------------
        + S EQ+    S + +S++CTFCK+GF N +ALGGHM +HRK+ A+LKQ S+S + L ++++N             +V T+   R++             
Subjt:  MNSKEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ-STSMSSLSLNEMN------------IIVDTSKTIRNT-------------

Query:  TSTIEETKIHELRELSLF---------VQKHSDMV-SSSQHGVSELDLELRLGHEPQNSTSSSTSMATTRHFF
        TS  ++T + E+R+L LF         V +++++V SSS    SELDLELRLG EPQ+S S+    A T+ FF
Subjt:  TSTIEETKIHELRELSLF---------VQKHSDMV-SSSQHGVSELDLELRLGHEPQNSTSSSTSMATTRHFF

XP_038895788.1 transcriptional regulator TAC1-like [Benincasa hispida]1.4e-1841.81Show/hide
Query:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTT--------------------STIEETKI
        +E+  G   +  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS S  SLS +   ++VD  K I  TT                       EET I
Subjt:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTT--------------------STIEETKI

Query:  -HELRELSLFVQKHSDM--------------------VSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF
          E+++L LFV+  S+M                     SS +HG  +SELDLELRLG EPQNST SS S   T HFF
Subjt:  -HELRELSLFVQKHSDM--------------------VSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF

TrEMBL top hitse value%identityAlignment
A0A0A0LXG2 C2H2-type domain-containing protein1.3e-1943.82Show/hide
Query:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTT-------------------STIEETKI-
        +EQSG +QST+ +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   ++VDT K +   T                     +EET I 
Subjt:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTT-------------------STIEETKI-

Query:  HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNSTSSST-SMATTRHFF
         E ++L LFV+ +                     S + S S+HG  VSELDLELRLG EPQNSTSSS+     T HFF
Subjt:  HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNSTSSST-SMATTRHFF

A0A1S3C679 transcriptional regulator TAC1-like1.5e-1843.02Show/hide
Query:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTI--------------------RNTTSTIEETKI
        +EQSG +QST  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   ++VDT K +                    R+    +EET I
Subjt:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTI--------------------RNTTSTIEETKI

Query:  -HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF
          E ++L LFV+ +                     S + S S+HG  VSELDLELRLG EPQNST S+S     T HFF
Subjt:  -HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF

A0A5A7VKP9 Transcriptional regulator TAC1-like1.5e-1843.02Show/hide
Query:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTI--------------------RNTTSTIEETKI
        +EQSG +QST  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   ++VDT K +                    R+    +EET I
Subjt:  KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTI--------------------RNTTSTIEETKI

Query:  -HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF
          E ++L LFV+ +                     S + S S+HG  VSELDLELRLG EPQNST S+S     T HFF
Subjt:  -HELRELSLFVQKH---------------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF

A0A6J1CKV7 transcriptional regulator TAC1-like5.7e-1842.44Show/hide
Query:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIV-DTSKTIRN----------------------------TTSTIEETKIHEL
        +S+ECTFCK+GF N +ALGGHM +HRK+ A++KQS S SSLS++   + V D SK I                              T+ST+EET   ++
Subjt:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIV-DTSKTIRN----------------------------TTSTIEETKIHEL

Query:  RELSLF-----------------VQKHSD--MVSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF
        ++L LF                 ++  SD  MV   QHG  VSELDLELRLG EPQNST SST   ++RHFF
Subjt:  RELSLF-----------------VQKHSD--MVSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF

I1LJY1 C2H2-type domain-containing protein7.2e-1337.09Show/hide
Query:  EQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNII-VDTSKTIRNTTSTIEETKIHELRELSLFVQKHSDMVS--
        E+ G S  T ++S EC FC++GF N +ALGGHM +HRK+ A+LKQ  S + +  ++      D++K   N   +++E  IH+ ++L LF +  +   +  
Subjt:  EQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNII-VDTSKTIRNTTSTIEETKIHELRELSLFVQKHSDMVS--

Query:  ---------------SSQHGVSELDLELRLGHEPQNSTSSSTSMATTRHFF
                       S+Q   SELDLELRLG EPQ+S+++ T    TR+FF
Subjt:  ---------------SSQHGVSELDLELRLGHEPQNSTSSSTSMATTRHFF

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.4e-0448.57Show/hide
Query:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQS
        +S+ C+FC++ F++ +ALGGHM +HR++ A LKQ+
Subjt:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQS

Q38895 Transcriptional regulator SUPERMAN1.2e-0450Show/hide
Query:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLS
        +S+ C+FCK+ FR+ +ALGGHM +HR++ A L+   S SS S
Subjt:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLS

Q9LHS9 Probable transcriptional regulator RABBIT EARS7.6e-0441.18Show/hide
Query:  SKEQSGGSQSTI--TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQST
        S E+ GG    +   +S+ C+FC + F++ +ALGGHM +HR++ A LKQ +
Subjt:  SKEQSGGSQSTI--TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQST

Q9SR34 Transcriptional regulator TAC16.9e-0530.83Show/hide
Query:  TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLNEMN-------IIVDTSKTIRNTTST-------IEETKIHE
        ++S+ C+FC +GF N +ALGGHM +HR++ A+L+Q               ++ + SL LNE            D  + + N  S        ++E+K+ +
Subjt:  TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLNEMN-------IIVDTSKTIRNTTST-------IEETKIHE

Query:  LRELSLFVQKHSDMVSSSQH-GVSELDLELRLG
          +     +   D  SSS H  +  LDLELRLG
Subjt:  LRELSLFVQKHSDMVSSSQH-GVSELDLELRLG

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 102.4e-0548.57Show/hide
Query:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQS
        +S+ C+FC++ F++ +ALGGHM +HR++ A LKQ+
Subjt:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQS

AT3G09290.1 telomerase activator14.9e-0630.83Show/hide
Query:  TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLNEMN-------IIVDTSKTIRNTTST-------IEETKIHE
        ++S+ C+FC +GF N +ALGGHM +HR++ A+L+Q               ++ + SL LNE            D  + + N  S        ++E+K+ +
Subjt:  TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLNEMN-------IIVDTSKTIRNTTST-------IEETKIHE

Query:  LRELSLFVQKHSDMVSSSQH-GVSELDLELRLG
          +     +   D  SSS H  +  LDLELRLG
Subjt:  LRELSLFVQKHSDMVSSSQH-GVSELDLELRLG

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein8.4e-0650Show/hide
Query:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLS
        +S+ C+FCK+ FR+ +ALGGHM +HR++ A L+   S SS S
Subjt:  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLS

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein3.8e-0628.68Show/hide
Query:  GSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLNEMNIIVDTSKTIRNTTSTIEETKIHELRELSLFV
        GSQ+   + + C FC++GF N +ALGGHM +HRK+ A+L+Q               S +     L E+   VDT    R       E  + +  + ++ +
Subjt:  GSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLNEMNIIVDTSKTIRNTTSTIEETKIHELRELSLFV

Query:  QKHSDMVSSSQHGVSELDLELRLGHEPQNSTSSSTS
             +  +       +DLELRLG +P   T+S+++
Subjt:  QKHSDMVSSSQHGVSELDLELRLGHEPQNSTSSSTS

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein6.9e-0833.33Show/hide
Query:  KEQSGGSQSTIT-KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNE----MNIIVD-------TSKTIRNTTSTIEETKIHELRELSL
        +  S  S ST+T + +ECTFCK+GF N +ALGGHM +HR++     +  + + ++L++     ++  D        S  +R TTS      I  LR  S+
Subjt:  KEQSGGSQSTIT-KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNE----MNIIVD-------TSKTIRNTTSTIEETKIHELRELSL

Query:  FVQKHSDMVSSSQHGVSELDLELRLG
          ++ + +V       +E+DLELRLG
Subjt:  FVQKHSDMVSSSQHGVSELDLELRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCAAAAGAACAAAGTGGTGGGAGTCAATCAACAATAACTAAGTCCCATGAGTGTACTTTTTGCAAGAAGGGCTTCAGAAATGGAAAAGCTTTAGGAGGCCATAT
GAGGCTACATAGAAAAGAGGTAGCTGAGCTCAAACAATCAACATCAATGTCGTCGTTGTCATTGAACGAGATGAATATTATTGTTGACACTTCGAAAACGATTCGAAATA
CGACTTCAACCATAGAAGAAACCAAAATTCATGAACTACGAGAACTCTCACTTTTTGTCCAGAAACACTCAGATATGGTGTCGTCGTCTCAACATGGTGTCTCCGAGCTG
GATCTTGAACTTAGATTAGGACATGAGCCACAAAACTCAACTTCATCATCAACCTCAATGGCTACTACTAGACATTTCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCAAAAGAACAAAGTGGTGGGAGTCAATCAACAATAACTAAGTCCCATGAGTGTACTTTTTGCAAGAAGGGCTTCAGAAATGGAAAAGCTTTAGGAGGCCATAT
GAGGCTACATAGAAAAGAGGTAGCTGAGCTCAAACAATCAACATCAATGTCGTCGTTGTCATTGAACGAGATGAATATTATTGTTGACACTTCGAAAACGATTCGAAATA
CGACTTCAACCATAGAAGAAACCAAAATTCATGAACTACGAGAACTCTCACTTTTTGTCCAGAAACACTCAGATATGGTGTCGTCGTCTCAACATGGTGTCTCCGAGCTG
GATCTTGAACTTAGATTAGGACATGAGCCACAAAACTCAACTTCATCATCAACCTCAATGGCTACTACTAGACATTTCTTTTGA
Protein sequenceShow/hide protein sequence
MNSKEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTTSTIEETKIHELRELSLFVQKHSDMVSSSQHGVSEL
DLELRLGHEPQNSTSSSTSMATTRHFF