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Tan0012911 (gene) of Snake gourd v1 genome

Gene IDTan0012911
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:81775379..81776156
RNA-Seq ExpressionTan0012911
SyntenyTan0012911
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581317.1 hypothetical protein SDJN03_21319, partial [Cucurbita argyrosperma subsp. sororia]5.7e-3160Show/hide
Query:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDRSKKKKEKIVEDDSKRG--DVWMPCFLLEDFEEEEV
        MEISGKRKR E+   DR D+D+ +IEKFSEIV+ FRAPY+WFRAK++GSGS       +TNG D +  K  KIV  DS RG   VWMPCFL+EDFEE+EV
Subjt:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDRSKKKKEKIVEDDSKRG--DVWMPCFLLEDFEEEEV

Query:  IKFWKSTALRKSDTAAPSSAAATTT-ERIDDGIEEKKSNE--ELDLRLCL
        IK WK+ AL KS TA P++AAA    E ID G E KK ++  ELDLRL L
Subjt:  IKFWKSTALRKSDTAAPSSAAATTT-ERIDDGIEEKKSNE--ELDLRLCL

KAG6606917.1 hypothetical protein SDJN03_00259, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4472.11Show/hide
Query:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDR--SKKKKEKIVEDDSKRGDVWMPCFLLEDFEEEEV
        ME SGKRKR END G+RN++DEAD+EKF EIVEKFRAPYDWFRAKMSGS         V NG+D+   KKKK+KIVEDDSKRGDVWMP FLLEDFEEEEV
Subjt:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDR--SKKKKEKIVEDDSKRGDVWMPCFLLEDFEEEEV

Query:  IKFWKSTALRKSDTAAPSSAAATTTERIDDGIEEKKSNEELDLRLCL
        IKFWKSTALRKS+T A ++AA T    +D G EEK++NE LDLRLCL
Subjt:  IKFWKSTALRKSDTAAPSSAAATTTERIDDGIEEKKSNEELDLRLCL

KGN58537.1 hypothetical protein Csa_002705 [Cucumis sativus]9.5e-2651.66Show/hide
Query:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDRSKKKKEKI---VEDDSKRGDVWMPCFLLEDFEEEE
        M+ISGKRKRN+N     N  +E +I+KFSEIVEKFRAPY+WFRA+MS   +A        NG DR KKKK+      ++D    DVWMPCFLL+DFEEEE
Subjt:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDRSKKKKEKI---VEDDSKRGDVWMPCFLLEDFEEEE

Query:  VIKFWKSTALRKSDTAAPSSAAATTTERIDDGI---EEKKSNEELDLRLCL
        VIK WK+ A+ + +TA P    A   E +D G    E+ K  E+L+LRL L
Subjt:  VIKFWKSTALRKSDTAAPSSAAATTTERIDDGI---EEKKSNEELDLRLCL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY6 Uncharacterized protein4.6e-2651.66Show/hide
Query:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDRSKKKKEKI---VEDDSKRGDVWMPCFLLEDFEEEE
        M+ISGKRKRN+N     N  +E +I+KFSEIVEKFRAPY+WFRA+MS   +A        NG DR KKKK+      ++D    DVWMPCFLL+DFEEEE
Subjt:  MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDRSKKKKEKI---VEDDSKRGDVWMPCFLLEDFEEEE

Query:  VIKFWKSTALRKSDTAAPSSAAATTTERIDDGI---EEKKSNEELDLRLCL
        VIK WK+ A+ + +TA P    A   E +D G    E+ K  E+L+LRL L
Subjt:  VIKFWKSTALRKSDTAAPSSAAATTTERIDDGI---EEKKSNEELDLRLCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTTCAGGCAAGAGGAAGCGGAACGAGAATGACAACGGTGATCGCAATGACACCGACGAGGCGGATATCGAGAAATTCAGCGAGATCGTCGAGAAATTTCGCGC
TCCGTACGACTGGTTTAGGGCCAAAATGTCCGGTTCCGGTTCCGCCATTGATTCGCTTCGTACCGTAACAAATGGCGACGATCGGAGCAAGAAGAAGAAGGAGAAGATTG
TTGAAGACGATTCGAAACGAGGCGATGTTTGGATGCCGTGTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTGATCAAGTTCTGGAAATCCACGGCGCTGCGAAAATCG
GACACGGCGGCTCCGTCGTCCGCGGCGGCGACGACGACGGAAAGGATCGACGATGGAATCGAGGAGAAGAAGAGTAACGAAGAGTTAGACCTTCGCCTCTGTCTTTAA
mRNA sequenceShow/hide mRNA sequence
CGAAACTACACGTTTTACGAAGTTCAGAAAATTTCCCAATTCTTTCCAAGGCGTTTTTCCTTCCTTCATTTTCCACAAAATTTCTCTCTCTCTCTCTCTCGATTTTGCAG
AATTCAATTCCAGCAAATGGAGATTTCAGGCAAGAGGAAGCGGAACGAGAATGACAACGGTGATCGCAATGACACCGACGAGGCGGATATCGAGAAATTCAGCGAGATCG
TCGAGAAATTTCGCGCTCCGTACGACTGGTTTAGGGCCAAAATGTCCGGTTCCGGTTCCGCCATTGATTCGCTTCGTACCGTAACAAATGGCGACGATCGGAGCAAGAAG
AAGAAGGAGAAGATTGTTGAAGACGATTCGAAACGAGGCGATGTTTGGATGCCGTGTTTTCTTCTGGAAGATTTCGAGGAAGAGGAGGTGATCAAGTTCTGGAAATCCAC
GGCGCTGCGAAAATCGGACACGGCGGCTCCGTCGTCCGCGGCGGCGACGACGACGGAAAGGATCGACGATGGAATCGAGGAGAAGAAGAGTAACGAAGAGTTAGACCTTC
GCCTCTGTCTTTAATTAAATTTGACTGTTTAGTTTAGTCATTTGCGCCAAAAAAAAAAAAAAAAAAGCCATCGGCTGGTTTTTATTTTATTCTTCCAAATTTTTTGACGC
GATTCAGAGATGGAGAGTCTATTTTTAAATCTCGATTTATTTGTTGAATTCAACTAAGAGGTAGAGAGTTGAGTTAATTTCAACCTAGTTGAGTAGAGTTTATCTTCCTA
TCTCACAA
Protein sequenceShow/hide protein sequence
MEISGKRKRNENDNGDRNDTDEADIEKFSEIVEKFRAPYDWFRAKMSGSGSAIDSLRTVTNGDDRSKKKKEKIVEDDSKRGDVWMPCFLLEDFEEEEVIKFWKSTALRKS
DTAAPSSAAATTTERIDDGIEEKKSNEELDLRLCL