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Tan0012918 (gene) of Snake gourd v1 genome

Gene IDTan0012918
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:15835743..15836430
RNA-Seq ExpressionTan0012918
SyntenyTan0012918
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050243.1 hypothetical protein E6C27_scaffold355G00870 [Cucumis melo var. makuwa]9.0e-1163.38Show/hide
Query:  IFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCFSLIHAKS
        + F+GL   SSA DAFV+SI FAFSGAL ALL+P + NLA F A YSL SM+SA LLLIWGL  +LI  K+
Subjt:  IFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCFSLIHAKS

KAG6579131.1 hypothetical protein SDJN03_23579, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1656.2Show/hide
Query:  MKSSDQIAFT-----LPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASM
        M+ SDQ A T      P T IL+SILF+S N+LTIL+ LFA S      + F+ L  PSS  DAFV+SI FAFSGAL ALL+P + NLA F A YSLASM
Subjt:  MKSSDQIAFT-----LPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASM

Query:  SSASLLLIWGLCFSLIHAKSQ
        +SA LLLIWGL  S +  K++
Subjt:  SSASLLLIWGLCFSLIHAKSQ

KAG6601931.1 hypothetical protein SDJN03_07164, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2864.91Show/hide
Query:  MKSSDQIAFTLPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASL
        M  SDQ AF  P T +LK IL++SLNTL+IL+ L  +S      + F+GL NPSSAFDAFVLSITFAF GALGALLIPHKPNLA FY  YS+ASM+SA L
Subjt:  MKSSDQIAFTLPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASL

Query:  LLIWGLCFSLIHAK
        LLIWGL +S +H +
Subjt:  LLIWGLCFSLIHAK

KGN49807.1 hypothetical protein Csa_004664 [Cucumis sativus]1.4e-1966.32Show/hide
Query:  TFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCF
        T +L SILFVS NTLTILM+L A+S D  +L+ FN L  PS AFDAFVLSITF+FS ALGALLIP+KP LA +YAFYS+A M+ A  LLI GL +
Subjt:  TFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCF

KGN49809.1 hypothetical protein Csa_004648 [Cucumis sativus]2.4e-1960.16Show/hide
Query:  MKSSDQIA-------FTLPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLA
        MK S+QIA       FTLP T ILKSILF+SLN+LTIL+ LFA S   T  + F+G   PSSA DAF++SI FAFSGAL ALL+P +  LA F A YSLA
Subjt:  MKSSDQIA-------FTLPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLA

Query:  SMSSASLLLIWGLCFSLIHAKSQ
        S++SA LLLIWGL  +LI  K+Q
Subjt:  SMSSASLLLIWGLCFSLIHAKSQ

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ9 Uncharacterized protein1.1e-1960.16Show/hide
Query:  MKSSDQIA-------FTLPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLA
        MK S+QIA       FTLP T ILKSILF+SLN+LTIL+ LFA S   T  + F+G   PSSA DAF++SI FAFSGAL ALL+P +  LA F A YSLA
Subjt:  MKSSDQIA-------FTLPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLA

Query:  SMSSASLLLIWGLCFSLIHAKSQ
        S++SA LLLIWGL  +LI  K+Q
Subjt:  SMSSASLLLIWGLCFSLIHAKSQ

A0A0A0KN11 Uncharacterized protein6.7e-2066.32Show/hide
Query:  TFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCF
        T +L SILFVS NTLTILM+L A+S D  +L+ FN L  PS AFDAFVLSITF+FS ALGALLIP+KP LA +YAFYS+A M+ A  LLI GL +
Subjt:  TFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCF

A0A5A7U2V8 Uncharacterized protein4.3e-1163.38Show/hide
Query:  IFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCFSLIHAKS
        + F+GL   SSA DAFV+SI FAFSGAL ALL+P + NLA F A YSL SM+SA LLLIWGL  +LI  K+
Subjt:  IFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCFSLIHAKS

A0A5B7B2W8 Uncharacterized protein (Fragment)6.9e-0952.17Show/hide
Query:  ILKSILFVSLNTLTILMYLFAKSTDETTL--IFFNGLPNPSSAFDAFVLSITFAFSGA-LGALLIPHKPNLANFYAFYSLASMSSASLLLIW
        IL+SILF S  T  IL+ L  ++ D   +  I F GLP   SAF AF++ I FAFSGA  G ++IPHKP LA F  + S+ASM+SA  LLIW
Subjt:  ILKSILFVSLNTLTILMYLFAKSTDETTL--IFFNGLPNPSSAFDAFVLSITFAFSGA-LGALLIPHKPNLANFYAFYSLASMSSASLLLIW

A0A5B7B649 Uncharacterized protein (Fragment)1.2e-0851.09Show/hide
Query:  ILKSILFVSLNTLTILMYLFAKSTDETTL--IFFNGLPNPSSAFDAFVLSITFAFSGA-LGALLIPHKPNLANFYAFYSLASMSSASLLLIW
        IL+SILF S  T  IL+ L  ++ D   +  I F GLP   SAF AF++ I FAFSGA  G ++IPHKP LA F  + S+ASM+SA  L+IW
Subjt:  ILKSILFVSLNTLTILMYLFAKSTDETTL--IFFNGLPNPSSAFDAFVLSITFAFSGA-LGALLIPHKPNLANFYAFYSLASMSSASLLLIW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTCAGACCAAATTGCTTTCACTCTTCCATTTACATTCATCCTAAAGTCCATTTTATTTGTGTCTTTAAACACTCTCACAATTCTCATGTACTTATTTGCAAA
AAGTACTGATGAAACTACTTTGATCTTCTTCAATGGCCTTCCCAATCCTTCCTCTGCCTTTGATGCCTTTGTTTTATCCATTACCTTTGCTTTCTCAGGTGCTTTGGGTG
CTCTTTTGATTCCTCATAAGCCCAACTTAGCCAACTTTTATGCCTTTTATTCTCTGGCTTCTATGTCTTCTGCTTCGCTTCTGCTGATTTGGGGCCTCTGTTTCTCACTC
ATTCATGCCAAATCCCAATAG
mRNA sequenceShow/hide mRNA sequence
AAATGAGCTGATATAATATATATCTATCAAAAGCTTCTCTACTATTTCCCTTTCTTCCTTCCTTGATGGGATGCAAGTTTAAAAAAACAAAGGAAGAAGGAAATGAAATC
TTCAGACCAAATTGCTTTCACTCTTCCATTTACATTCATCCTAAAGTCCATTTTATTTGTGTCTTTAAACACTCTCACAATTCTCATGTACTTATTTGCAAAAAGTACTG
ATGAAACTACTTTGATCTTCTTCAATGGCCTTCCCAATCCTTCCTCTGCCTTTGATGCCTTTGTTTTATCCATTACCTTTGCTTTCTCAGGTGCTTTGGGTGCTCTTTTG
ATTCCTCATAAGCCCAACTTAGCCAACTTTTATGCCTTTTATTCTCTGGCTTCTATGTCTTCTGCTTCGCTTCTGCTGATTTGGGGCCTCTGTTTCTCACTCATTCATGC
CAAATCCCAATAGAAAACTTTATGTATTCAGACACAGTTCTGTTTCTATTCTACTTCTTCTCTTATGAATGTCCTTTAATATCAATCTAAATTTTCTTTTAACGTATTCT
CAATGATTGATGTTGTCAAATAAAAACAACCAAACCATTGAATATACCCAATTATTTTATGTCCTTATATATGTAATGTTTGTTTTTGGTTCTTGAAGTTTGGGTTAAGG
ATTCGATTTTGGTTCATAGAGTTTCAAA
Protein sequenceShow/hide protein sequence
MKSSDQIAFTLPFTFILKSILFVSLNTLTILMYLFAKSTDETTLIFFNGLPNPSSAFDAFVLSITFAFSGALGALLIPHKPNLANFYAFYSLASMSSASLLLIWGLCFSL
IHAKSQ