| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-215 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
|
|
| KAA0047792.1 gag/pol protein [Cucumis melo var. makuwa] | 6.3e-216 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
|
|
| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-215 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
|
|
| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-215 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
|
|
| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 1.1e-215 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 5.2e-216 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
|
|
| A0A5A7TWB9 Gag/pol protein | 3.0e-216 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
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| A0A5A7TZD7 Gag/pol protein | 5.2e-216 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
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| A0A5D3CPJ6 Gag/pol protein | 5.2e-216 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
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| A0A5D3CSZ6 Gag/pol protein | 5.2e-216 | 44.96 | Show/hide |
Query: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
T L N LQTF+SL++ +GQ+ E +VA R FHRGSTSG K + SS K +K K K + A K+ K CF+ N + H K++CPK+L E
Subjt: TVLFNNLQTFQSLVQTRGQEAETSVA--LRPFHRGSTSGIKFVDSSGPKGKKEKLK---EVKVDRVVALKGKEIKDVARKCFYSNGDEHLKKSCPKFLDE
Query: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
KK GK DLLV ETCLVE++DSAWI+DSGATNHVCSSFQG+S W++++ GE+T+RVG+ VVSA A+G
Subjt: KKMT--GKCDLLVTETCLVESNDSAWILDSGATNHVCSSFQGLSPWQRMQEGEITLRVGSEEVVSAAAIG------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
+NGVSERRNRTLLDMVRSMMSYA LP+SFW YAV+T VYILN V SKSV ETP +LW+GRK SL HFRIWGCP
Subjt: --------------------------TKNGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCETPFELWHGRKTSLCHFRIWGCP
Query: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
HVL +N KKLEPRSKLCLFVGYPK TRGGYFYDPKDN+V VSTNATF EEDHIR+H PRSKIVLNE+ + + + +
Subjt: THVLVSNLKKLEPRSKLCLFVGYPKETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLNEMDNTSVRVADGAI-------------------R
Query: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Q L PRRSGRV P RYM L ET + D D EDPLT+ +AM D+DKDEWIKAM+ E+ESMYFNSVW+LVDQ DGVKPIGCKWIYKRKRG DGKVQT
Subjt: SQKLGMPRRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQT
Query: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
FKARLVAKG+TQVEGVDYEETFSPVAM MDVKTAFLNGNL+E IYM QP+GFI GQEQ++C+L RSIYGLKQASRSWNIR
Subjt: FKARLVAKGFTQVEGVDYEETFSPVAM--------------------MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIR
Query: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
FD AIKSYGFDQ VDEPCVYK+I+N VAFL+LYVDDILLIGN++G LTDIK+WLA+QFQ KDLGEAQ+VLGI+
Subjt: FDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIR--------------------------
Query: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
+ K+GL PF HGV L ++QCPKTPQ+VE+MR IP + + QS+ L R T D LVYGS DLI
Subjt: CELQKKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIP-------------------------MLQLQSSSILGE-----------RGTTD--LVYGSGDLI
Query: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
L GYTDS F D+DSRKSTSGS NGG VV
Subjt: LHGYTDSTFGHDKDSRKSTSGSPSFSNGGVVV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.1e-48 | 26.8 | Show/hide |
Query: NGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCE---TPFELWHGRKTSLCHFRIWGCPTHVLVSNLK-KLEPRSKLCLFVGYP
NGVSER RT+ + R+M+S A+L SFW AV T Y++N + S+++ + TP+E+WH +K L H R++G +V + N + K + +S +FVGY
Subjt: NGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVCE---TPFELWHGRKTSLCHFRIWGCPTHVLVSNLK-KLEPRSKLCLFVGYP
Query: KETRGGYFYD-------------------------------------------PKDNRVLVST----------NATFFEE--------------------
E G +D P D+R ++ T N F ++
Subjt: KETRGGYFYD-------------------------------------------PKDNRVLVST----------NATFFEE--------------------
Query: -----------DHIRDHLPRSKIVLNEM----------------DNTSVRVADGAIRSQKLGMP------------RRSGRVVRQPERYMGLAETQ----
++D +K LNE + R ++ A +++G+ RRS R+ +P+ +
Subjt: -----------DHIRDHLPRSKIVLNEM----------------DNTSVRVADGAIRSQKLGMP------------RRSGRVVRQPERYMGLAETQ----
Query: VLTLDDDYED-PLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPVA
VL + D P ++D+ DK W +A++ E+ + N+ W + + + + +W++ K G +KARLVA+GFTQ +DYEETF+PVA
Subjt: VLTLDDDYED-PLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPVA
Query: --------------------MMDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVY---KKI
MDVKTAFLNG L E IYM P+G VC+L ++IYGLKQA+R W F++A+K F + + C+Y K
Subjt: --------------------MMDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVY---KKI
Query: VNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQK
+N + +++LYVDD+++ ++ + + K +L +F+ DL E ++ +GIR E+Q+
Subjt: VNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-76 | 30.68 | Show/hide |
Query: NGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVC-ETPFELWHGRKTSLCHFRIWGCP--THVLVSNLKKLEPRSKLCLFVGYPK
NGV+ER NRT+++ VRSM+ A+LP SFW AV+T Y++N S + E P +W ++ S H +++GC HV KL+ +S C+F+GY
Subjt: NGVSERRNRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSVC-ETPFELWHGRKTSLCHFRIWGCP--THVLVSNLKKLEPRSKLCLFVGYPK
Query: ETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLN----------------------------------------EMDNTSVRVADGAIRSQKL
E G +DP +V+ S + F E +R S+ V N E + V + + ++
Subjt: ETRGGYFYDPKDNRVLVSTNATFFEEDHIRDHLPRSKIVLN----------------------------------------EMDNTSVRVADGAIRSQKL
Query: GMP-RRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKA
P RRS R + RY T+ + + DD E P + + ++ +K++ +KAM +EMES+ N ++LV+ G +P+ CKW++K K+ D K+ +KA
Subjt: GMP-RRSGRVVRQPERYMGLAETQVLTLDDDYEDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKA
Query: RLVAKGFTQVEGVDYEETFSPVAMM--------------------DVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDE
RLV KGF Q +G+D++E FSPV M DVKTAFL+G+L+E IYM+QP+GF G++ VC+L +S+YGLKQA R W ++FD
Subjt: RLVAKGFTQVEGVDYEETFSPVAMM--------------------DVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDE
Query: AIKSYGFDQNVDEPCVY-KKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQ------------------------
+KS + + +PCVY K+ + L+LYVDD+L++G + G + +K L+ F KDLG AQ +LG++ +
Subjt: AIKSYGFDQNVDEPCVY-KKIVNSIVAFLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQ------------------------
Query: --KKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIPMLQLQSSSILGE------------------------------------RGTTD--LVYGSGDLILH
K +P + L + CP T +E +M ++P S + RGTT L +G D IL
Subjt: --KKGLSPFGHGVHLPEDQCPKTPQEVEDMRRIPMLQLQSSSILGE------------------------------------RGTTD--LVYGSGDLILH
Query: GYTDSTFGHDKDSRKSTSGSPSFSNGGVV
GYTD+ D D+RKS++G +GG +
Subjt: GYTDSTFGHDKDSRKSTSGSPSFSNGGVV
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| P25600 Putative transposon Ty5-1 protein YCL074W | 2.0e-15 | 33.58 | Show/hide |
Query: MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGF
MDV TAFLN +DE IY+ QP GF+ + V L +YGLKQA WN + +K GF ++ E +Y + + ++ +YVDD+L+
Subjt: MDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYVDDILLIGNEVGF
Query: LTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKG
+K+ L + KDLG+ LG+ G
Subjt: LTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.4e-38 | 35.22 | Show/hide |
Query: DPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDG-VKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPV----------
+P T QA+ D + W AM E+ + N W+LV V +GC+WI+ +K DG + +KARLVAKG+ Q G+DY ETFSPV
Subjt: DPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDG-VKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPV----------
Query: ----------AMMDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYV
+DV AFL G L + +YM QP GFI + + VC+L++++YGLKQA R+W + + + GF +V + ++ + ++++YV
Subjt: ----------AMMDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYV
Query: DDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGL
DDIL+ GN+ L + + L+ +F KD E Y LGI + GL
Subjt: DDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.8e-38 | 35.22 | Show/hide |
Query: DPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELV-DQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPV----------
+P T QAM D D W +AM E+ + N W+LV V +GC+WI+ +K DG + +KARLVAKG+ Q G+DY ETFSPV
Subjt: DPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELV-DQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPV----------
Query: ----------AMMDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYV
+DV AFL G L + +YM QP GF+ + + VCRL+++IYGLKQA R+W + + + GF ++ + ++ + ++++YV
Subjt: ----------AMMDVKTAFLNGNLDEIIYMDQPKGFIAQGQEQRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFLILYV
Query: DDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGL
DDIL+ GN+ L + L+ +F K+ + Y LGI + +GL
Subjt: DDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 3.3e-45 | 38.89 | Show/hide |
Query: EDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPVA---------
++P TY++A + W AMD E+ +M WE+ KPIGCKW+YK K DG ++ +KARLVAKG+TQ EG+D+ ETFSPV
Subjt: EDPLTYDQAMADIDKDEWIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPVA---------
Query: -----------MMDVKTAFLNGNLDEIIYMDQPKGFIA-QGQE---QRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFL
+D+ AFLNG+LDE IYM P G+ A QG VC LK+SIYGLKQASR W ++F + +GF Q+ + + KI ++ +
Subjt: -----------MMDVKTAFLNGNLDEIIYMDQPKGFIA-QGQE---QRVCRLKRSIYGLKQASRSWNIRFDEAIKSYGFDQNVDEPCVYKKIVNSIVAFL
Query: ILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGLS
++YVDDI++ N + ++K L S F+ +DLG +Y LG+ G++
Subjt: ILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGLS
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| ATMG00710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein | 1.9e-05 | 32.93 | Show/hide |
Query: NRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSV-CETPFELWHGRKTSLCHFRIWGCPTHVLVSNLKKLEPRSK
NRT+++ VRSM+ LP +F A T V+I+N S ++ P E+W + + R +GC ++ KL+PR+K
Subjt: NRTLLDMVRSMMSYARLPDSFWDYAVETTVYILNTVSSKSV-CETPFELWHGRKTSLCHFRIWGCPTHVLVSNLKKLEPRSK
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 2.1e-04 | 45.28 | Show/hide |
Query: FLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGL
+L+LYVDDILL G+ L + L+S F KDLG Y LGI+ + GL
Subjt: FLILYVDDILLIGNEVGFLTDIKEWLASQFQTKDLGEAQYVLGIRCELQKKGL
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 3.3e-13 | 41.67 | Show/hide |
Query: WIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPVAMMDVKTAFLN
W +AM +E++++ N W LV +GCKW++K K DG + KARLVAKGF Q EG+ + ET+SPV LN
Subjt: WIKAMDQEMESMYFNSVWELVDQSDGVKPIGCKWIYKRKRGVDGKVQTFKARLVAKGFTQVEGVDYEETFSPVAMMDVKTAFLN
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