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Tan0012933 (gene) of Snake gourd v1 genome

Gene IDTan0012933
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPolyphenol oxidase
Genome locationLG05:84468299..84473030
RNA-Seq ExpressionTan0012933
SyntenyTan0012933
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AKN08990.1 polyphenol oxidase [Luffa aegyptiaca]5.5e-0948.89Show/hide
Query:  MACLSRPLPPSLSSPNNISISSFCSFFRNNKDPSSRLRRRRFVVN-VPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
        MA LS P P +LSS    + + F   FRNNK PS   R R+F++N  P V CSASNG Q     K DRRD+L+GL GL+G   +GP + A
Subjt:  MACLSRPLPPSLSSPNNISISSFCSFFRNNKDPSSRLRRRRFVVN-VPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
APO14262.1 polyphenol oxidase 3 [Luffa aegyptiaca]8.0e-0846.34Show/hide
Query:  PPSLSSPNNISISSFCSFFRNNKDPSSRLRRRR-FVVNVPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
        PP+LSS    + ++F  F  NNK+P   LRR + F    P + CSASNGGQNH    +DRRD+LIGL GL+G   +   + A
Subjt:  PPSLSSPNNISISSFCSFFRNNKDPSSRLRRRR-FVVNVPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
WP_146072591.1 hypothetical protein, partial [Arthrobacter sp. 4R501]4.0e-0768.63Show/hide
Query:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
        G A AAEIPS SS+VFP  LDSTLR+DVPRP     KKEK+D+EE+LVI G
Subjt:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
WP_146073306.1 tyrosinase family protein, partial [Arthrobacter sp. N199823]4.0e-0768.63Show/hide
Query:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
        G A AAEIPS SS+VFP  LDSTLR+DVPRP     KKEK+D+EE+LVI G
Subjt:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
XP_034698197.1 polyphenol oxidase, chloroplastic-like [Vitis riparia]4.0e-0768.63Show/hide
Query:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
        G A AAEIPS SS+VFP  LDSTLR+DVPRP     KKEK+D+EE+LVI G
Subjt:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
TrEMBL top hitse value%identityAlignment
A0A0U2D7M5 Polyphenol oxidase2.7e-0948.89Show/hide
Query:  MACLSRPLPPSLSSPNNISISSFCSFFRNNKDPSSRLRRRRFVVN-VPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
        MA LS P P +LSS    + + F   FRNNK PS   R R+F++N  P V CSASNG Q     K DRRD+L+GL GL+G   +GP + A
Subjt:  MACLSRPLPPSLSSPNNISISSFCSFFRNNKDPSSRLRRRRFVVN-VPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
A0A1L5JHU3 Polyphenol oxidase 33.9e-0846.34Show/hide
Query:  PPSLSSPNNISISSFCSFFRNNKDPSSRLRRRR-FVVNVPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
        PP+LSS    + ++F  F  NNK+P   LRR + F    P + CSASNGGQNH    +DRRD+LIGL GL+G   +   + A
Subjt:  PPSLSSPNNISISSFCSFFRNNKDPSSRLRRRR-FVVNVPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAA
A0A438JHW3 Polyphenol oxidase, chloroplastic1.9e-0768.63Show/hide
Query:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
        G A AAEIPS SS+VFP  LDSTLR+DVPRP     KKEK+D+EE+LVI G
Subjt:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
A0A6G6B0Q9 Polyphenol oxidase (Fragment)1.9e-0768.63Show/hide
Query:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
        G A AAEIPS SS+VFP  LDSTLR+DVPRP     KKEK+D+EE+LVI G
Subjt:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
A5BPY3 Tyrosinase_Cu-bd domain-containing protein1.9e-0768.63Show/hide
Query:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
        G A AAEIPS SS+VFP  LDSTLR+DVPRP     KKEK+D+EE+LVI G
Subjt:  GPATAAEIPSVSSVVFPRVLDSTLRLDVPRP-----KKEKKDDEEILVISG
SwissProt top hitse value%identityAlignment
P43309 Polyphenol oxidase, chloroplastic3.3e-0435.44Show/hide
Query:  PPSLSSPN--NISISSFCSFFRNNKDPSSRLRRRRFVVNVPTVFCSASNGGQN-HSPDKVDRRDMLIGLAGLFGVLGIG
        PP +++P   N +      F +NN   S   + +R       V C A+N  QN  +  K+DRR++L+GL GL+GV G+G
Subjt:  PPSLSSPN--NISISSFCSFFRNNKDPSSRLRRRRFVVNVPTVFCSASNGGQN-HSPDKVDRRDMLIGLAGLFGVLGIG
Q08307 Polyphenol oxidase E, chloroplastic1.9e-0435.16Show/hide
Query:  CLSRPLPPSLSSPNNISISSFCSFFRNNKDPSSRLRRRRFVVNVPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGP-ATAAEIP
        C ++ L  S ++ N+  +S     F + +      R + F V+     C+A+N  +N  PD VDRR++L+GL GL+G   + P ATAA IP
Subjt:  CLSRPLPPSLSSPNNISISSFCSFFRNNKDPSSRLRRRRFVVNVPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGP-ATAAEIP
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTCTATCTCGTCCACTGCCACCGTCACTTTCCTCCCCCAACAATATATCCATTTCCTCTTTTTGCTCATTTTTTCGTAATAACAAAGACCCATCATCCAGGCT
GCGAAGAAGAAGATTTGTTGTTAATGTTCCAACAGTTTTTTGCAGCGCCTCCAATGGTGGTCAAAATCATTCGCCAGACAAAGTTGATCGGAGAGACATGCTTATTGGGC
TTGCAGGTCTGTTTGGGGTGCTGGGAATTGGCCCAGCAACGGCCGCGGAGATTCCCTCAGTGAGCAGCGTTGTGTTTCCGAGAGTTCTGGACTCGACCCTAAGATTGGAT
GTTCCGAGGCCGAAGAAGGAGAAAAAGGATGACGAAGAGATATTGGTGATAAGTGGGAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTCGATCGAGAAAATGAAAAAAAACGAAGCTTTTTGAGGGGAAAAAAAAAAAGGGTACATCTATGGCTTGTCTATCTCGTCCACTGCCACCGTCACTTTCCTCCCCCAA
CAATATATCCATTTCCTCTTTTTGCTCATTTTTTCGTAATAACAAAGACCCATCATCCAGGCTGCGAAGAAGAAGATTTGTTGTTAATGTTCCAACAGTTTTTTGCAGCG
CCTCCAATGGTGGTCAAAATCATTCGCCAGACAAAGTTGATCGGAGAGACATGCTTATTGGGCTTGCAGGTCTGTTTGGGGTGCTGGGAATTGGCCCAGCAACGGCCGCG
GAGATTCCCTCAGTGAGCAGCGTTGTGTTTCCGAGAGTTCTGGACTCGACCCTAAGATTGGATGTTCCGAGGCCGAAGAAGGAGAAAAAGGATGACGAAGAGATATTGGT
GATAAGTGGGAATTGAATTGAACGAAAAAAAATTCGTAAAATTCGATATTTTTATGAACGATGAAGATGACCCAGTAAGTAGGCCAGATAATACAGAGTTTGCAGGGAGC
TTTGTGAACATACCCCATACGCATGGCAACGATAAGAAAAGACAGAAGGAGCTTATCTGATTTGCTTGATGATTTGGTCGCAGATGACGACGATAGCGTGATTGTGACTC
TAGTGCCAAGGAAGAAC
Protein sequenceShow/hide protein sequence
MACLSRPLPPSLSSPNNISISSFCSFFRNNKDPSSRLRRRRFVVNVPTVFCSASNGGQNHSPDKVDRRDMLIGLAGLFGVLGIGPATAAEIPSVSSVVFPRVLDSTLRLD
VPRPKKEKKDDEEILVISGN