CuGenDBv2

Gene ID	Tan0012938
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ribosomal protein L34
Genome location	LG04:87319256..87321883
RNA-Seq Expression	Tan0012938
Synteny	Tan0012938
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000271 - Ribosomal protein L34

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581832.1 hypothetical protein SDJN03_21834, partial [Cucurbita argyrosperma subsp. sororia]

9.2e-42

61.08

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS+LLIRTGNSL+NRLRL+STHQNN IW+ Q+LS GHG +VTPMLFPSVS HQTAH+LQQNDTESLRKLESEGI FPFGLPSLRFFLPDG         
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  +E +L        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

XP_022955352.1 uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata]

1.2e-41

61.08

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS+LLIRTGNSL+NRLRL+STHQNN IW+ Q+LS GHG +VTPMLFPSVS HQTAH+LQQNDTESLRKLESEGI FPFGLPSLRFFLPDG         
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  +E +L        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

XP_022997833.1 uncharacterized protein LOC111492674 [Cucurbita maxima]

1.9e-42

62.7

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS LL+RTGNSLINRLRLNSTHQ +RIW PQTLS GHGAEVTPMLFPS+S HQTA +LQQNDTE++RKLESEGI FPFGLPSLRFFLPDG        Y
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  E MLL        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

XP_023523687.1 uncharacterized protein LOC111787851 [Cucurbita pepo subsp. pepo]

7.8e-41

61.62

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS LL+RTGNSLINRLRLNS HQ +RIW PQTLS GHGAEVTPMLFPS+S HQTA +LQQNDTES+RKLESEGI FPFGLPSLRFFLPDG         
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  E M+L        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

XP_023526192.1 uncharacterized protein LOC111789743 isoform X2 [Cucurbita pepo subsp. pepo]

6.0e-41

60.54

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS+LLIRTGNSL+NRLRL+STHQNN IW+ Q+LS GHG +VTPMLFPSVS HQ AH+LQQNDTESLRKLESEGI FPFGLPSLRFFLPDG         
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  +E +L        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIB6 Uncharacterized protein

1.4e-40

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS+LLIRTG+SL+NRLRL+S HQNNRIW  Q LS GHG EVTPMLFPSVS HQTAH LQQNDTESLR+L+SEGI FPFGLPSLRFFLPDG         
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  +E +L        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

A0A6J1GBE4 uncharacterized protein LOC111452439

2.4e-40

61.62

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS LL+RTGNSLINRLRLNS HQ +RIW  QTLS GHGAEVTPMLFPS+S HQTA +LQQNDTES+RKLESEGI FPFGLPSLRFFLPDG      N  
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
            E MLL        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

A0A6J1GTQ0 uncharacterized protein LOC111457406 isoform X2

5.8e-42

61.08

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS+LLIRTGNSL+NRLRL+STHQNN IW+ Q+LS GHG +VTPMLFPSVS HQTAH+LQQNDTESLRKLESEGI FPFGLPSLRFFLPDG         
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  +E +L        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

A0A6J1IXD9 uncharacterized protein LOC111480019 isoform X2

1.1e-40

60.54

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS+LLIRTGNSL+NRLRL+ST QNN IW+ Q+LS GHG +VTPMLFPSVS HQTAH+LQQNDTESLRKLESEGI FPFGLPSLRFFLPDG         
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  +E +L        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

A0A6J1KF33 uncharacterized protein LOC111492674

9.0e-43

62.7

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Query:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY
        MAS LL+RTGNSLINRLRLNSTHQ +RIW PQTLS GHGAEVTPMLFPS+S HQTA +LQQNDTE++RKLESEGI FPFGLPSLRFFLPDG        Y
Subjt:  MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIY

Query:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
         S  E MLL        F K  F   PS               I   R   FF +       KATKGGRKVIARRIAKGRSRITA
Subjt:  VSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13882.1 Ribosomal protein L34

1.9e-16

39.36

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Query:  MASRLLIRTGNSLINRLRLNSTH---QNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVP
        MA++ LIR+G SL+NR     T    QNN   + Q ++   G E+ P  FPS+SN Q++   + NDT SL++L   G  +P GLPSL FFLP+       
Subjt:  MASRLLIRTGNSLINRLRLNSTH---QNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVP

Query:  NIYVSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
           V    E LL        F K  F   PS               I   R   FF +       KATKGGR+VIARRIAKGR R+TA
Subjt:  NIYVSGCEEMLLRLKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

AT3G13882.2 Ribosomal protein L34

8.6e-14

36.02

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Query:  GAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPN------IYVSGCEEMLLRLK---NQCSYFLKGLF---NLA
        G E+ P  FPS+SN Q++   + NDT SL++L   G  +P GLPSL FFLP+   +   +      +Y S    +L+  K       ++L  +F   N+ 
Subjt:  GAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPN------IYVSGCEEMLLRLK---NQCSYFLKGLF---NLA

Query:  PSGGRGIMDFLPGI--SPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA
              ++ F         I   R   FF +       KATKGGR+VIARRIAKGR R+TA
Subjt:  PSGGRGIMDFLPGI--SPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

Sequences

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CDS sequence

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ATGGCGTCCAGACTTCTGATTCGGACGGGAAATTCTTTGATCAATCGGTTGCGACTAAATTCCACGCATCAGAATAACAGGATTTGGAATCCCCAAACTCTGTCCCTTGG
CCATGGCGCTGAAGTCACTCCGATGCTATTTCCTTCAGTCTCTAATCACCAGACAGCTCACAATTTGCAGCAGAATGACACCGAGTCGTTGAGGAAGCTCGAATCGGAAG
GCATCTCCTTCCCTTTTGGTCTTCCGTCGCTTCGGTTCTTCTTGCCCGACGGTATGCTGGTCTGTGTTCCAAACATATATGTGTCTGGTTGTGAGGAGATGCTTCTTCGA
CTGAAGAACCAATGCTCTTATTTCCTAAAAGGACTTTTCAACCTAGCACCATCAGGCGGAAGAGGAATCATGGATTTTTTGCCCGGTATCTCTCCATTAATTTATGGTCT
GCGAACAATGTTATTTTTCTTAAAAATTCCCAGTAGAGCTTTATGCAAAGCAACCAAGGGTGGGCGGAAAGTTATTGCTCGAAGGATTGCAAAGGGCCGATCAAGAATAA
CTGCATAA

mRNA sequence

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Protein sequence

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MASRLLIRTGNSLINRLRLNSTHQNNRIWNPQTLSLGHGAEVTPMLFPSVSNHQTAHNLQQNDTESLRKLESEGISFPFGLPSLRFFLPDGMLVCVPNIYVSGCEEMLLR
LKNQCSYFLKGLFNLAPSGGRGIMDFLPGISPLIYGLRTMLFFLKIPSRALCKATKGGRKVIARRIAKGRSRITA

Tan0012938 (gene) of Snake gourd v1 genome