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Tan0012941 (gene) of Snake gourd v1 genome

Gene IDTan0012941
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncalmodulin-like
Genome locationLG02:86180731..86181518
RNA-Seq ExpressionTan0012941
SyntenyTan0012941
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951880.1 calmodulin-like [Cucurbita moschata]3.5e-5073.47Show/hide
Query:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA
        +HH + YM+E +A  LIKKYDKNGDSILTKDELTAMILEQASQ  G  KD+V KPKKK  KVPE++   M+LSRSEIRDIFLEHDIDGDG+L  SE+TKA
Subjt:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA

Query:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK
        F+ IGSMLP +KAHYGL  ADADGDG I E+ELEKL+DYAE+VS+RK
Subjt:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK

XP_023002888.1 calmodulin-like [Cucurbita maxima]4.4e-3755.97Show/hide
Query:  SSHQLHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVH------KDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDG
        +S QLH  QA+  E EA E I+ YDKN DS L+K+EL+A I    ++N G H      KDV  K +K   K  EE+   MKLSRS+I++IF+EHDIDGDG
Subjt:  SSHQLHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVH------KDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDG

Query:  FLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLG
        +L+ SE+TKAF+  GS++P +KAHYGLA ADADGDGLI E+ELEKL+DYAE+ +++K G
Subjt:  FLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLG

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]2.9e-4973.47Show/hide
Query:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA
        +HH Q YM+E +A  LIKKYDKNGDSILTKDELTAMILEQASQ  G  KDVV KPKK   KVPE++   M+LSRSEIRDIFLEHDIDGDG+L  SE+TKA
Subjt:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA

Query:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK
        F+ IGSMLP +KAHYGL  ADADGDG I E+EL KL+DYAE+VS+RK
Subjt:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK

XP_023537874.1 probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]6.1e-4774.29Show/hide
Query:  MTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKAFASIGSM
        M+E +A  LIKKYDKNGDSILTKDELTAMILEQASQ  G  KD+V KPKKK  KVPE++   M+LSRSEIRDIFLEHDIDGDG+L  SE+TKAF+ IGSM
Subjt:  MTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKAFASIGSM

Query:  LPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK
        LP +KAHYGL  ADADGDG I E+EL KL+DYAE+VS+RK
Subjt:  LPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK

XP_038885758.1 calmodulin-like protein 3 [Benincasa hispida]1.8e-3856.52Show/hide
Query:  MSSHQLHHGQA----YMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGV---HKDVVSKPKK-KADKVPEEE--FKMKLSRSEIRDIFLEHDI
        MS++ LH+ +A    YM+E+EA  LI+KYDKNGDSILTK+ELTA+I++QA+ +H +    ++VV KP+K +A  +P+E+  FKM+L+R E+R+IFLEHDI
Subjt:  MSSHQLHHGQA----YMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGV---HKDVVSKPKK-KADKVPEEE--FKMKLSRSEIRDIFLEHDI

Query:  DGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK
        DGDG LT+SE++KA  + GS++  HKA+Y L LADADGDGLI+ DELEK++DY EK+++ K
Subjt:  DGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK

TrEMBL top hitse value%identityAlignment
A0A5A7V211 Calcium-binding protein-like4.4e-3558.39Show/hide
Query:  MSSHQL--HHGQA---YMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKK-KADKVPEEE-----FKMKLSRSEIRDIFLEHD
        MS++ L  HH  A   YM+E+EA  LIKKYDKNGDSILTKDELTA+I+EQA+ +H  H+ V  KP+K +  KVP+E+     +KM+LSR E+R+IFLEHD
Subjt:  MSSHQL--HHGQA---YMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKK-KADKVPEEE-----FKMKLSRSEIRDIFLEHD

Query:  IDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQR
        IDGDG LT+SE+ KAF   GS+    KA+Y L LADADGD  I  DELEK++DYA++V  R
Subjt:  IDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQR

A0A6J1GK16 calmodulin-like6.2e-3755.35Show/hide
Query:  SSHQLHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVH------KDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDG
        +S QLH   A+  E EA EL++ YDKN DS L+K+EL+A I    ++N G H      KDV  K +K   K  EE+   MKLSRS+I++IF+EHDIDGDG
Subjt:  SSHQLHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVH------KDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDG

Query:  FLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLG
        +L+ SE+TKAF+  GS++P +KAHYGLA ADADGDGLI E+ELEKL+DYAE+ +++K G
Subjt:  FLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLG

A0A6J1GK54 calmodulin-like1.7e-5073.47Show/hide
Query:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA
        +HH + YM+E +A  LIKKYDKNGDSILTKDELTAMILEQASQ  G  KD+V KPKKK  KVPE++   M+LSRSEIRDIFLEHDIDGDG+L  SE+TKA
Subjt:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA

Query:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK
        F+ IGSMLP +KAHYGL  ADADGDG I E+ELEKL+DYAE+VS+RK
Subjt:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK

A0A6J1KRR4 calmodulin-A-like1.4e-4973.47Show/hide
Query:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA
        +HH Q YM+E +A  LIKKYDKNGDSILTKDELTAMILEQASQ  G  KDVV KPKK   KVPE++   M+LSRSEIRDIFLEHDIDGDG+L  SE+TKA
Subjt:  LHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKA

Query:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK
        F+ IGSMLP +KAHYGL  ADADGDG I E+EL KL+DYAE+VS+RK
Subjt:  FASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRK

A0A6J1KUW2 calmodulin-like2.1e-3755.97Show/hide
Query:  SSHQLHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVH------KDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDG
        +S QLH  QA+  E EA E I+ YDKN DS L+K+EL+A I    ++N G H      KDV  K +K   K  EE+   MKLSRS+I++IF+EHDIDGDG
Subjt:  SSHQLHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVH------KDVVSKPKKKADKVPEEE-FKMKLSRSEIRDIFLEHDIDGDG

Query:  FLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLG
        +L+ SE+TKAF+  GS++P +KAHYGLA ADADGDGLI E+ELEKL+DYAE+ +++K G
Subjt:  FLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLG

SwissProt top hitse value%identityAlignment
P02595 Calmodulin2.1e-0528.99Show/hide
Query:  MTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD---KVPE------EEFKMKLSRSEIRDIFLEHDIDGDGFLTK
        +TEE+ AE       +DK+GD  +T  EL   ++    QN      +D++++     D     PE       + K   S  EIR+ F   D DGDGF++ 
Subjt:  MTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD---KVPE------EEFKMKLSRSEIRDIFLEHDIDGDGFLTK

Query:  SEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDE
        +E+     ++G  L   +    +  AD DGDG ++ +E
Subjt:  SEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDE

P02599 Calmodulin7.1e-0627.4Show/hide
Query:  QAYMTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD-KVPEEEFKMKLSR--------SEIRDIFLEHDIDGDGF
        Q  +TEE+ AE       +DK+GD  +T  EL   ++    QN      +D++++     +  +   EF   ++R         EIR+ F   D DG+G+
Subjt:  QAYMTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD-KVPEEEFKMKLSR--------SEIRDIFLEHDIDGDGF

Query:  LTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI
        ++ +E+     S+G  L + +    +  AD DGDG ++ DE  K++
Subjt:  LTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI

P04352 Calmodulin1.6e-0525.48Show/hide
Query:  MTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD-KVPEEEFKMKLSR--------SEIRDIFLEHDIDGDGFLTK
        +TEE+ AE       +DK+GD  +T  EL   ++    QN      +D++S+     +  +   EF M ++R         E+R+ F   D DG+GF++ 
Subjt:  MTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD-KVPEEEFKMKLSR--------SEIRDIFLEHDIDGDGFLTK

Query:  SEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLGRR
        +E+     ++G  L   +    +  AD DGDG ++ +E  +++       + K G +
Subjt:  SEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLGRR

P62184 Calmodulin4.2e-0628.67Show/hide
Query:  MTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD---KVPE------EEFKMKLSRSEIRDIFLEHDIDGDGFLTK
        +TEE+ AE       +DK+GD  +T  EL   ++    QN      +D++++     D     PE       + K   S  EIR+ F   D DGDGF++ 
Subjt:  MTEEEAAEL---IKKYDKNGDSILTKDELTAMILEQASQN--HGVHKDVVSKPKKKAD---KVPE------EEFKMKLSRSEIRDIFLEHDIDGDGFLTK

Query:  SEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI
        +E+     ++G  L   +    +  AD DGDG ++ +E  K++
Subjt:  SEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI

Q8RYJ9 Putative calcium-binding protein CML239.3e-0638.03Show/hide
Query:  LSRSEIRDIFLEHDIDGDGFLTKSEVTKAF-ASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAE
        ++  E R +F   D DGDG ++ +E+     AS+G  +P  +    +ALAD DGDGL+DE+E  +L+   E
Subjt:  LSRSEIRDIFLEHDIDGDGFLTKSEVTKAF-ASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLIDYAE

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein2.1e-0530.23Show/hide
Query:  MKLSRSEIRD---IFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI----DYAEKVSQRKL
        MK    + RD   +F   D + DG ++  E+ K+F ++G  +   +A   + L+D DGDG++D +E   LI    ++ E+  +RK+
Subjt:  MKLSRSEIRD---IFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI----DYAEKVSQRKL

AT1G76650.1 calmodulin-like 382.1e-0533.33Show/hide
Query:  EIRDIFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI---DYAEKVSQRK
        E+  +F   D + DG ++  E+ K+F ++G  L   +A   + L+D DGDG++D +E  +LI   D  EK  + K
Subjt:  EIRDIFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI---DYAEKVSQRK

AT1G76650.3 calmodulin-like 382.1e-0533.33Show/hide
Query:  EIRDIFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI---DYAEKVSQRK
        E+  +F   D + DG ++  E+ K+F ++G  L   +A   + L+D DGDG++D +E  +LI   D  EK  + K
Subjt:  EIRDIFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI---DYAEKVSQRK

AT2G43290.1 Calcium-binding EF-hand family protein2.1e-0533.33Show/hide
Query:  KLSRSEIRDIFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKL
        ++  SE++ +F   D +GDG +TK E+  +  ++G  +P       +   DA+GDG +D DE E L
Subjt:  KLSRSEIRDIFLEHDIDGDGFLTKSEVTKAFASIGSMLPHHKAHYGLALADADGDGLIDEDELEKL

AT4G14640.1 calmodulin 85.6e-0626.67Show/hide
Query:  EAAELIKKYDKNGDSILTKDELTAMI--LEQASQNHGVHKDVVSKPKKKADKVPEEEF----KMKLSRS----EIRDIFLEHDIDGDGFLTKSEVTKAFA
        E  E    +DK+GD  +T +EL  +I  L+Q      +H  +          +   EF      KL  S    E+++ F   D D +G+++ SE++    
Subjt:  EAAELIKKYDKNGDSILTKDELTAMI--LEQASQNHGVHKDVVSKPKKKADKVPEEEF----KMKLSRS----EIRDIFLEHDIDGDGFLTKSEVTKAFA

Query:  SIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI
        ++G  L   +    +  AD DGDG ++ DE  K++
Subjt:  SIGSMLPHHKAHYGLALADADGDGLIDEDELEKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAGCCATCAACTTCATCATGGCCAAGCTTATATGACCGAAGAAGAAGCGGCCGAACTGATCAAGAAGTATGACAAAAATGGTGATTCAATCCTCACTAAAGATGA
GCTAACTGCTATGATCCTTGAACAAGCATCTCAAAACCATGGAGTTCATAAGGATGTTGTAAGCAAGCCTAAAAAAAAAGCCGATAAGGTTCCAGAGGAGGAGTTCAAGA
TGAAGCTGAGTCGAAGCGAGATCAGAGACATCTTCTTAGAGCATGATATTGATGGTGATGGTTTTCTTACTAAGAGTGAGGTAACAAAGGCCTTCGCCTCCATAGGTTCA
ATGCTTCCTCATCACAAAGCTCACTATGGTTTAGCTCTTGCTGATGCTGATGGAGATGGCCTTATCGACGAGGACGAGCTTGAAAAACTCATTGATTATGCTGAGAAAGT
CAGTCAAAGAAAATTAGGACGACGTTGTTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAAACTAAGCTCCTGAAACTCCTATAAAGTGTTAATCTTCTTAAGAGGTTTTTCCCATCCCAAAACTTTTGCAAACCAATTCAAACTAGCCTTAGTGTAAAATAATG
TCTAGCCATCAACTTCATCATGGCCAAGCTTATATGACCGAAGAAGAAGCGGCCGAACTGATCAAGAAGTATGACAAAAATGGTGATTCAATCCTCACTAAAGATGAGCT
AACTGCTATGATCCTTGAACAAGCATCTCAAAACCATGGAGTTCATAAGGATGTTGTAAGCAAGCCTAAAAAAAAAGCCGATAAGGTTCCAGAGGAGGAGTTCAAGATGA
AGCTGAGTCGAAGCGAGATCAGAGACATCTTCTTAGAGCATGATATTGATGGTGATGGTTTTCTTACTAAGAGTGAGGTAACAAAGGCCTTCGCCTCCATAGGTTCAATG
CTTCCTCATCACAAAGCTCACTATGGTTTAGCTCTTGCTGATGCTGATGGAGATGGCCTTATCGACGAGGACGAGCTTGAAAAACTCATTGATTATGCTGAGAAAGTCAG
TCAAAGAAAATTAGGACGACGTTGTTAAATTATTATATCTTATGAATTACTTACAATAATGAGTTTTCTCGACTCCAAAAACTCTTCCTATCTATGCTACCTTGGTTTAT
CATATTTATCAATATAAATTAGCTCTCTTTACCAAATTTGAATTTGGAACTCCATCAATTTATAAAAATGAAGAGAGAATGTTGGTCATTACAAATCTATCTAAATGAAC
TTTTTGTTGATATGTGCA
Protein sequenceShow/hide protein sequence
MSSHQLHHGQAYMTEEEAAELIKKYDKNGDSILTKDELTAMILEQASQNHGVHKDVVSKPKKKADKVPEEEFKMKLSRSEIRDIFLEHDIDGDGFLTKSEVTKAFASIGS
MLPHHKAHYGLALADADGDGLIDEDELEKLIDYAEKVSQRKLGRRC