; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012953 (gene) of Snake gourd v1 genome

Gene IDTan0012953
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNADH-ubiquinone oxidoreductase chain 6
Genome locationLG07:44977828..44980575
RNA-Seq ExpressionTan0012953
SyntenyTan0012953
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR001457 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
IPR042106 - NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AUD57050.1 NADH dehydrogenase subunit 6 [Pentas lanceolata]4.6e-4581.54Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

AUD57051.1 NADH dehydrogenase subunit 6 [Cephalanthus occidentalis]4.6e-4581.54Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

AUD57052.1 NADH dehydrogenase subunit 6 [Cubanola domingensis]4.6e-4581.54Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

KAF7117292.1 hypothetical protein RHSIM_RhsimMtG0007100 [Rhododendron simsii]1.7e-4777.55Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLF I VFR+TSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK------DDRPTHDLLKG
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K      DDRPTHDLLKG
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK------DDRPTHDLLKG

QYB18028.1 NADH dehydrogenase subunit 6 [Damnacanthus indicus var. indicus]4.6e-4581.54Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

TrEMBL top hitse value%identityAlignment
A0A2H4YAP1 NADH-ubiquinone oxidoreductase chain 62.2e-4581.54Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

A0A2H4YAR6 NADH-ubiquinone oxidoreductase chain 62.2e-4581.54Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

A0A2H4YAS2 NADH-ubiquinone oxidoreductase chain 62.2e-4581.54Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMVVR K P+H VLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

A0A6N2K4C4 Uncharacterized protein8.2e-4875.5Show/hide
Query:  RRTMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP---------
        RRTM+LSVLSSP LVS LMV R K P+H VLF I VFRNTSGLL+LLGLDF AMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP         
Subjt:  RRTMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP---------

Query:  -WEMFFILDNENIPLLPTQRNTTSLRYTLYARK------DDRPTHDLLKGK
         WEMFFILDNE+IPLLPTQR TTSLRYT+YA K      DDRP HDLLKGK
Subjt:  -WEMFFILDNENIPLLPTQRNTTSLRYTLYARK------DDRPTHDLLKGK

A0A6N2MNA9 Uncharacterized protein1.3e-4563.89Show/hide
Query:  RRTMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP---------
        RRTM+LSVLSSP LVS LMV R K P+H VLF I VFRNTSGLL+LLGLDF AMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP         
Subjt:  RRTMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP---------

Query:  -WEMFFILDNENIPLLPTQRNTTSLRYTLYARK--------------------------DDRPTHDLLKGKYKGTFGPPV
         WEMFFILDNE+IPLLPTQR TTSLRYT+YA K                          DDRP HDLLKGK +     P+
Subjt:  -WEMFFILDNENIPLLPTQRNTTSLRYTLYARK--------------------------DDRPTHDLLKGKYKGTFGPPV

SwissProt top hitse value%identityAlignment
P26850 NADH-ubiquinone oxidoreductase chain 63.8e-2659.17Show/hide
Query:  LVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WEMFFILDNENI
        LVS  MV+R K P+H VLF I VF NTSGLL+LLGLDFFAMIF VV++ AI V FLFV MM HI+I EI+E VLRYLP           E+F ++DN+ I
Subjt:  LVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WEMFFILDNENI

Query:  PLLPTQRNTTSLRYTLYARK
        P+LPT+ + T L YT+YA K
Subjt:  PLLPTQRNTTSLRYTLYARK

P60497 NADH-ubiquinone oxidoreductase chain 62.7e-4075.38Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSS  LVS LMVVR K P+H VLF I VF +TSGLLLLLGLDFFAMIF VV+I AI V FLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

P60498 NADH-ubiquinone oxidoreductase chain 66.7e-4780Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMV R K P+H VLFPIPVFR+TSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

Q02500 NADH-ubiquinone oxidoreductase chain 61.5e-4374.29Show/hide
Query:  KGGGEARRRTMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP--
        KGG    RRTM+LSVLSSP LVS LMVVR K P+H VLFPI VF +TSGLL+LLGLDF AMI PVVHI AI VSFLFV MMF+IQIAEI+EEVLRYLP  
Subjt:  KGGGEARRRTMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP--

Query:  --------WEMFFILDNENIPLLPTQRNTTSLRYTLYARK
                WEMFFILDNE IPLLPT RNTTSLRYT+YA K
Subjt:  --------WEMFFILDNENIPLLPTQRNTTSLRYTLYARK

Q37626 NADH-ubiquinone oxidoreductase chain 61.7e-1848.31Show/hide
Query:  VLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WEMFFI
        + SS TL+S  +V++ + P+H VLF + VF N +GLL+LLGLDFFA+IF VV++ AI V FLFV MM +I+I EI+E+ LRYLP          +E+  +
Subjt:  VLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WEMFFI

Query:  LDNENIPLLPTQRNTTSL
        +DN+ IPLL      T+L
Subjt:  LDNENIPLLPTQRNTTSL

Arabidopsis top hitse value%identityAlignment
AT2G07718.1 Cytochrome b/b6 protein1.4e-0442.47Show/hide
Query:  TMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMF
        TM+LSVLSSP LVS LMV R K  +H VLFPIP+F + + L       +F  +  + H+       LF+   F
Subjt:  TMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMF

ATMG00270.1 NADH dehydrogenase 64.7e-4880Show/hide
Query:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE
        M+LSVLSSP LVS LMV R K P+H VLFPIPVFR+TSGLLLLLGLDFFAMIFPVVHI AI VSFLFV MMFHIQIAEI+EEVLRYLP          WE
Subjt:  MVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLP----------WE

Query:  MFFILDNENIPLLPTQRNTTSLRYTLYARK
        MFFILDNE+IPLLPTQRNTTSLRYT+YA K
Subjt:  MFFILDNENIPLLPTQRNTTSLRYTLYARK

ATMG00590.1 Cytochrome b/b6 protein1.4e-0442.47Show/hide
Query:  TMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMF
        TM+LSVLSSP LVS LMV R K  +H VLFPIP+F + + L       +F  +  + H+       LF+   F
Subjt:  TMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIEAIVVSFLFVFMMF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACGAGAAAAACTGAAATCTTCCTACTCGAACGATCAGTCCTATAGTTCGATCAGTCCTATAAAAAATCAAAAGGATCGAACTACCGTACCTACTCATTATTCGGG
GGTGAATCATAGAACACTAAAAGCTGAGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGACGACGTACCATGGTACTTTCCGTTTTGTCGAGCCCAACTTTGGTCTCTA
GTTTGATGGTTGTACGTGTTAAAACTCCAATACATTATGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCT
ATGATCTTCCCAGTAGTTCATATAGAAGCTATAGTCGTTTCATTCCTATTCGTTTTTATGATGTTTCATATTCAAATAGCGGAGATTAACGAAGAAGTCTTGCGCTATTT
ACCATGGGAAATGTTTTTCATTTTGGATAATGAAAACATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGCTTTATGCCAGAAAGGACGACAGAC
CCACTCACGATCTACTAAAGGGCAAGTATAAAGGAACATTCGGACCCCCAGTCGTCGCTGGAGTCCCTGACTCAGTAAAGCAATCACACAAGGTGAGTGGAGACCATTTT
CGTGTGGGACTCATAGCAAAAGATGCCTCAAAGCATACGACCACGAAAAAGACGAGGGCAGGATTCCCAGAGCGGGAAGGGAGAACGAGGGATGTGAAATTCCACAAAGG
GGGGTGTGTCACCGTACCCAAAAGGATACAGAAATATCTGAAGGAGCATGGTGACCCCAAAGAGTACGACATTGAGAGGCCCATCAAGACAAAGCTGTTATTCCTTTATG
GGGAACAAAGCACGCAGAAGACACTCATTTTTAACTTGATATTAAATGTACTCAAAATCGTTTTCGCGAGTTCAAGAAGAAAGAATTTTGCTGGGGCCCACAACCACTAC
GATATTTGCCTCTTCGATAAGTTACACGAACCAGACCCACAAAGCTGCATCATAGGTGCAACGCAGGAGGAAACTGCCTTTGCAAATACGATGTTAAAGTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACGAGAAAAACTGAAATCTTCCTACTCGAACGATCAGTCCTATAGTTCGATCAGTCCTATAAAAAATCAAAAGGATCGAACTACCGTACCTACTCATTATTCGGG
GGTGAATCATAGAACACTAAAAGCTGAGCCCAGAACGCTTAAAGGTGGGGGAGAAGCAAGACGACGTACCATGGTACTTTCCGTTTTGTCGAGCCCAACTTTGGTCTCTA
GTTTGATGGTTGTACGTGTTAAAACTCCAATACATTATGTTTTGTTTCCCATCCCAGTCTTTCGCAACACTTCAGGTTTACTTCTTTTGTTAGGTCTCGACTTCTTCGCT
ATGATCTTCCCAGTAGTTCATATAGAAGCTATAGTCGTTTCATTCCTATTCGTTTTTATGATGTTTCATATTCAAATAGCGGAGATTAACGAAGAAGTCTTGCGCTATTT
ACCATGGGAAATGTTTTTCATTTTGGATAATGAAAACATTCCATTACTACCAACCCAAAGAAATACGACCTCTCTGAGATATACGCTTTATGCCAGAAAGGACGACAGAC
CCACTCACGATCTACTAAAGGGCAAGTATAAAGGAACATTCGGACCCCCAGTCGTCGCTGGAGTCCCTGACTCAGTAAAGCAATCACACAAGGTGAGTGGAGACCATTTT
CGTGTGGGACTCATAGCAAAAGATGCCTCAAAGCATACGACCACGAAAAAGACGAGGGCAGGATTCCCAGAGCGGGAAGGGAGAACGAGGGATGTGAAATTCCACAAAGG
GGGGTGTGTCACCGTACCCAAAAGGATACAGAAATATCTGAAGGAGCATGGTGACCCCAAAGAGTACGACATTGAGAGGCCCATCAAGACAAAGCTGTTATTCCTTTATG
GGGAACAAAGCACGCAGAAGACACTCATTTTTAACTTGATATTAAATGTACTCAAAATCGTTTTCGCGAGTTCAAGAAGAAAGAATTTTGCTGGGGCCCACAACCACTAC
GATATTTGCCTCTTCGATAAGTTACACGAACCAGACCCACAAAGCTGCATCATAGGTGCAACGCAGGAGGAAACTGCCTTTGCAAATACGATGTTAAAGTACTAG
Protein sequenceShow/hide protein sequence
MEREKLKSSYSNDQSYSSISPIKNQKDRTTVPTHYSGVNHRTLKAEPRTLKGGGEARRRTMVLSVLSSPTLVSSLMVVRVKTPIHYVLFPIPVFRNTSGLLLLLGLDFFA
MIFPVVHIEAIVVSFLFVFMMFHIQIAEINEEVLRYLPWEMFFILDNENIPLLPTQRNTTSLRYTLYARKDDRPTHDLLKGKYKGTFGPPVVAGVPDSVKQSHKVSGDHF
RVGLIAKDASKHTTTKKTRAGFPEREGRTRDVKFHKGGCVTVPKRIQKYLKEHGDPKEYDIERPIKTKLLFLYGEQSTQKTLIFNLILNVLKIVFASSRRKNFAGAHNHY
DICLFDKLHEPDPQSCIIGATQEETAFANTMLKY