; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0012995 (gene) of Snake gourd v1 genome

Gene IDTan0012995
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCHCH domain-containing protein
Genome locationLG02:93181704..93183827
RNA-Seq ExpressionTan0012995
SyntenyTan0012995
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]9.0e-6187.5Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS
        MPRRSSGGRSASRP PRAPLRNPPAPAS APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR I HETVDSS  S PS+ASN GGS
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS

Query:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        +AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]1.2e-6088.28Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG
        MPRRSSGGRSASRP PRAP RN PAPA SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVI HETVDSSTP S PS+ASNPGG
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG

Query:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        S+AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

XP_022997290.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Cucurbita maxima]3.4e-6087.59Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG
        MPRRSSGGRSASRP PRAP RN PAPA+SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVI HETVDSSTP S PS+A NPGG
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG

Query:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        S+AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

XP_023001881.1 uncharacterized protein C6C3.02c-like [Cucurbita maxima]2.6e-6087.5Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS
        MPRRSSGGRSASRP PRAP+RNPP PA SAPPPAPVQGGGGGSMLGGLGATIAQG+AFGTGSAVAHRAVDAVMGPRVI HE VDSS+ + P IA+NPGGS
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS

Query:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        E C VQSKAFEDCLNHYG+DIGKCQFYLDMLK+CR GSGSVLGA
Subjt:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]1.3e-6288.19Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS
        MPRRSSGGRSASRP PRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR I HET+DSST S PS+A+NPGGS
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS

Query:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        +AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein4.4e-6187.5Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS
        MPRRSSGGRSASRP PRAPLRNPPAPAS APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR I HETVDSS  S PS+ASN GGS
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS

Query:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        +AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 101.2e-5884.03Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS
        MPRRSSGGRSA RP  RAP RNPPAP +SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR I HET+DSS  S PS+ASN GGS
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS

Query:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        +AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial5.7e-6188.28Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG
        MPRRSSGGRSASRP PRAP RN PAPA SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVI HETVDSSTP S PS+ASNPGG
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG

Query:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        S+AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like1.7e-6087.59Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG
        MPRRSSGGRSASRP PRAP RN PAPA+SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVI HETVDSSTP S PS+A NPGG
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTP-SVPSIASNPGG

Query:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        S+AC VQSK+F+DCLNHYGSDI KCQFYLDML++CR  SGSVLGA
Subjt:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

A0A6J1KJW6 uncharacterized protein C6C3.02c-like1.3e-6087.5Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS
        MPRRSSGGRSASRP PRAP+RNPP PA SAPPPAPVQGGGGGSMLGGLGATIAQG+AFGTGSAVAHRAVDAVMGPRVI HE VDSS+ + P IA+NPGGS
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGS

Query:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        E C VQSKAFEDCLNHYG+DIGKCQFYLDMLK+CR GSGSVLGA
Subjt:  EACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein6.9e-3554.48Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPA-SSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGG
        MPR SSGGRS+ RP+  A  R+PP  + + APPPA  Q   GGS LG +GA+I +G+A+GTG+A  HR VD+VMGPR   HETV S  PS  +  +    
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPA-SSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGG

Query:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
          AC + SKAF+DC+NH+GSDI KCQFY+DML +C+  SGSV+ A
Subjt:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)4.6e-3960.69Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGG
        M RRSSGGRSA RP P A     P P   APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPR I HE V++++ S  + A +   
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGG

Query:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA
        S  C + +KAF+DC+  YGS+I KCQFY+DML +CR  SGSV+GA
Subjt:  SEACIVQSKAFEDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)5.5e-2459.29Show/hide
Query:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGG
        M RRSSGGRSA RP P A     P P   APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPR I HE V++++ S  + A +   
Subjt:  MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGG

Query:  SEACIVQSKAFED
        S  C + +KAF+D
Subjt:  SEACIVQSKAFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGGAGCTCCGGAGGACGATCTGCTTCCCGCCCCACCCCTCGCGCTCCACTACGCAATCCTCCGGCGCCAGCTAGTTCTGCTCCTCCACCCGCACCTGTACA
AGGTGGTGGAGGTGGGTCTATGCTCGGAGGACTTGGTGCCACTATTGCTCAAGGTATGGCCTTCGGTACCGGAAGTGCAGTGGCTCATAGGGCTGTTGATGCTGTAATGG
GTCCACGGGTCATTGCACACGAGACTGTTGATTCATCAACTCCTTCAGTGCCTTCTATAGCGAGCAATCCTGGAGGTTCTGAAGCTTGTATTGTTCAATCAAAGGCCTTT
GAAGATTGCCTGAACCACTATGGAAGTGACATTGGCAAGTGCCAGTTCTACTTGGATATGTTGAAGCAATGTCGCAGCGGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
AGAAACCCCACATAAACCAGGAACCCTAGAGCGCAGATCTCATCTATCGCGACAGACAGCCACCGCCATTTCCATTACTTTTCCTCCACACCGTTGTCTCTTCTTATTGT
CTGCAACCATGCCTCGTCGGAGCTCCGGAGGACGATCTGCTTCCCGCCCCACCCCTCGCGCTCCACTACGCAATCCTCCGGCGCCAGCTAGTTCTGCTCCTCCACCCGCA
CCTGTACAAGGTGGTGGAGGTGGGTCTATGCTCGGAGGACTTGGTGCCACTATTGCTCAAGGTATGGCCTTCGGTACCGGAAGTGCAGTGGCTCATAGGGCTGTTGATGC
TGTAATGGGTCCACGGGTCATTGCACACGAGACTGTTGATTCATCAACTCCTTCAGTGCCTTCTATAGCGAGCAATCCTGGAGGTTCTGAAGCTTGTATTGTTCAATCAA
AGGCCTTTGAAGATTGCCTGAACCACTATGGAAGTGACATTGGCAAGTGCCAGTTCTACTTGGATATGTTGAAGCAATGTCGCAGCGGCTCAGGTTCTGTTTTGGGTGCT
TAAAAGAATTGATTTACAATTATATTATTTTCTCACTCTGCTCCATTCGGACGACCGCAGTGAGCGGTGTCAAGATTATGGTGTGCTGTGACAGTGTTTTCATTTTACGA
GTACTTCTTTGACTTTAATAAAAGGTGTTTAATGATGAAACACTTCACCGTTTGGACTCTACTGTTTGATTTTATGTTTTGAATGTTCCCTTGTTAAATTTATACCGTTG
TTTGGATTATTTACATGACGAATGTTTTAAGAATTATTGAATTAGGACAACAATTGTATAATCCTGATTGGTGTATGGATTTGGTTTTATG
Protein sequenceShow/hide protein sequence
MPRRSSGGRSASRPTPRAPLRNPPAPASSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIAHETVDSSTPSVPSIASNPGGSEACIVQSKAF
EDCLNHYGSDIGKCQFYLDMLKQCRSGSGSVLGA