; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013008 (gene) of Snake gourd v1 genome

Gene IDTan0013008
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30A
Genome locationLG09:56970468..56974284
RNA-Seq ExpressionTan0013008
SyntenyTan0013008
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139072.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Cucumis sativus]1.9e-12388.15Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRY  GRGRDLPTSLLVRNL HDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP---PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRER
        CVLLGRELTVVFAEENRKKPSDMRARERGSGR+HDRRRSP   PR+SRSPAQR  RYSRSPAPR+ARSRSRSYDYAS PPKQRAYSRS+SPRDR DSRER
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP---PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRER

Query:  SYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSV------SRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        S+PRQ+S GRSYSRSPRLDGSRSRSQSP +  SRSPSP+RG+S SRSRSRS       SRS+SPRRSPRHEEEYRSEPN GDRSPSQ
Subjt:  SYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSV------SRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

XP_022153263.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X1 [Momordica charantia]2.9e-12488.93Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRYGG GR RDLPTSLLVRNLRHDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPR
        GCVLLGRELTVVFAEENRKKPSDMRARERG    SGRFHDRRRSP      PR+SRSPA RHARYSRSPAPR+ARSRSRSYDY SPPPKQRA SRSVSPR
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPR

Query:  DRRDSRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        DRRDSRERSYPRQ S GRSYS+SPRL+GSRSRSQSPARG SRS SP RG    RSRSRSVSRS+SPRRSPRHEEEYRS+PN GDRSPSQ
Subjt:  DRRDSRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

XP_022153264.1 serine/arginine-rich SC35-like splicing factor SCL30A isoform X2 [Momordica charantia]5.3e-12690.18Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRYGG GR RDLPTSLLVRNLRHDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRD
        GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP      PR+SRSPA RHARYSRSPAPR+ARSRSRSYDY SPPPKQRA SRSVSPRDRRD
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRD

Query:  SRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        SRERSYPRQ S GRSYS+SPRL+GSRSRSQSPARG SRS SP RG    RSRSRSVSRS+SPRRSPRHEEEYRS+PN GDRSPSQ
Subjt:  SRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

XP_023006139.1 serine/arginine-rich SC35-like splicing factor SCL30A [Cucurbita maxima]1.1e-12387.63Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRR FGQFGAIKD+YLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSV--SPRDRRDSRERS
        CVL GRE+TVVFAEENRKKPSDMRARERGSGRFHDRRRSPPR+SRSP QRHAR S SPAPR+ARSRSRSYDYASPPP+QRAYSRS+  SPR RRDSRERS
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSV--SPRDRRDSRERS

Query:  YPRQQSGGRSYSRSPRLDGSRSRSQSPA-RGRSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        YPRQ S G SYS+SP+LDG+RSRSQSPA RG SRSPSP+RG+  S SR RSRS+S+S+SPR SPRHEEEYRSE NGG RSPS+
Subjt:  YPRQQSGGRSYSRSPRLDGSRSRSQSPA-RGRSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

XP_023531530.1 serine/arginine-rich SC35-like splicing factor SCL30A [Cucurbita pepo subsp. pepo]5.9e-12588.69Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRR FGQFGAIKD+YLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSV--SPRDRRDSRERS
        CVL GRE+TVVFAEENRKKPSDMRARERGSGRFHDRRRSPPR+SRSP QRHAR S SPAP +ARSRSRSYDYASPPP+QRAYSRS+  SPR RRDSRERS
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSV--SPRDRRDSRERS

Query:  YPRQQSGGRSYSRSPRLDGSRSRSQSPA-RGRSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        YPRQ S GRSYSRSP+LDG+RSRSQSPA RG SRSPSP+RG+  S SRSRSRS+SRS+SPR SPRHEEEYRSE NGG RSPS+
Subjt:  YPRQQSGGRSYSRSPRLDGSRSRSQSPA-RGRSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

TrEMBL top hitse value%identityAlignment
A0A0A0LZX6 RRM domain-containing protein9.1e-12488.15Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRY  GRGRDLPTSLLVRNL HDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP---PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRER
        CVLLGRELTVVFAEENRKKPSDMRARERGSGR+HDRRRSP   PR+SRSPAQR  RYSRSPAPR+ARSRSRSYDYAS PPKQRAYSRS+SPRDR DSRER
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP---PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRER

Query:  SYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSV------SRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        S+PRQ+S GRSYSRSPRLDGSRSRSQSP +  SRSPSP+RG+S SRSRSRS       SRS+SPRRSPRHEEEYRSEPN GDRSPSQ
Subjt:  SYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSV------SRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

A0A1S3BPL2 serine/arginine-rich SC35-like splicing factor SCL30A isoform X23.5e-12387.85Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRY  GRGRDLPTSLLVRNL HDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDS
        CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP      PR+SRSPAQR  RYSRSPAPR+ARSRSRSYDYASPPPKQRAYSRSVSPRDR DS
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDS

Query:  RERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSV----SRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        RERS+PRQ+S GRSYSRSPRLDGSRSRS SP RG  RSPSP+RG+S SRSRSRS     SRS+SP+ SPRHEEEYRSEPN GDRSP Q
Subjt:  RERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSV----SRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

A0A6J1DH06 serine/arginine-rich SC35-like splicing factor SCL30A isoform X11.4e-12488.93Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRYGG GR RDLPTSLLVRNLRHDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPR
        GCVLLGRELTVVFAEENRKKPSDMRARERG    SGRFHDRRRSP      PR+SRSPA RHARYSRSPAPR+ARSRSRSYDY SPPPKQRA SRSVSPR
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERG----SGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPR

Query:  DRRDSRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        DRRDSRERSYPRQ S GRSYS+SPRL+GSRSRSQSPARG SRS SP RG    RSRSRSVSRS+SPRRSPRHEEEYRS+PN GDRSPSQ
Subjt:  DRRDSRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

A0A6J1DIJ4 serine/arginine-rich SC35-like splicing factor SCL30A isoform X22.6e-12690.18Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
        MRGRSYTPSPPRGYGRRGRSPSPRGRYGG GR RDLPTSLLVRNLRHDCRPEDLRR FGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGG-GRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMD

Query:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRD
        GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP      PR+SRSPA RHARYSRSPAPR+ARSRSRSYDY SPPPKQRA SRSVSPRDRRD
Subjt:  GCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSP------PRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRD

Query:  SRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        SRERSYPRQ S GRSYS+SPRL+GSRSRSQSPARG SRS SP RG    RSRSRSVSRS+SPRRSPRHEEEYRS+PN GDRSPSQ
Subjt:  SRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

A0A6J1KZE4 serine/arginine-rich SC35-like splicing factor SCL30A5.3e-12487.63Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRR FGQFGAIKD+YLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSV--SPRDRRDSRERS
        CVL GRE+TVVFAEENRKKPSDMRARERGSGRFHDRRRSPPR+SRSP QRHAR S SPAPR+ARSRSRSYDYASPPP+QRAYSRS+  SPR RRDSRERS
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSV--SPRDRRDSRERS

Query:  YPRQQSGGRSYSRSPRLDGSRSRSQSPA-RGRSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ
        YPRQ S G SYS+SP+LDG+RSRSQSPA RG SRSPSP+RG+  S SR RSRS+S+S+SPR SPRHEEEYRSE NGG RSPS+
Subjt:  YPRQQSGGRSYSRSPRLDGSRSRSQSPA-RGRSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ

SwissProt top hitse value%identityAlignment
O75494 Serine/arginine-rich splicing factor 103.6e-2439.16Show/hide
Query:  TSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDGCVLLGRELTVVFAEENRKKPSDMRARE----RGSGR
        TSL VRN+  D R EDLRR FG++G I D+Y+P D+YT  PRGF +VQ+ D  DA DA H +D   + GR++ + FA+ +RK P+ M+A+E      S R
Subjt:  TSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDGCVLLGRELTVVFAEENRKKPSDMRARE----RGSGR

Query:  FHDRRRSPPRHSRSPAQRHAR-------YSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYPRQQSGGRSYSRS-PRLD-----GSR
        + D  R     SRS  +R +R       Y RS +PRN+R   R        P++   SRS S  DR   R RS+ R +S  RS S+S P+ +      SR
Subjt:  FHDRRRSPPRHSRSPAQRHAR-------YSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYPRQQSGGRSYSRS-PRLD-----GSR

Query:  SRSQSPARGRSRSPSPMRGQSPSR----------SRSRSVSRSQSPRRSPRHEEEYRSEPNGG
        S S +  RG S++ S    +S SR           RS+S SRSQS  RS      + S  + G
Subjt:  SRSQSPARGRSRSPSPMRGQSPSR----------SRSRSVSRSQSPRRSPRHEEEYRSEPNGG

Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL281.1e-3045.12Show/hide
Query:  RGRSYTP-----SPPR---GY--GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA
        R RSY+P     SPPR   GY   R    PS R     G     P+ LL+RNL  D RP DLR  F +FG +KDIYLP++YYTGEPRGFGFV+Y    DA
Subjt:  RGRSYTP-----SPPR---GY--GRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA

Query:  ADAKHQMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNAR-SRSRSYDYASPPPKQRAYSRSVSPRD
        A+A  +M+  V+ GRE+ +VFAEENRK P +MR     SGR  D +R+  R  R   + H+R SRSP  R +R S+ R  D  SP  + R+ SRS  PR+
Subjt:  ADAKHQMDGCVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNAR-SRSRSYDYASPPPKQRAYSRSVSPRD

Query:  RRDSRERSYPRQQSGGRSYSRSPR----LDGSRSRSQSPARGRSRS
         R+ + R+            RSPR    L   RSR  S +R RS S
Subjt:  RRDSRERSYPRQQSGGRSYSRSPR----LDGSRSRSQSPARGRSRS

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL301.6e-3242.8Show/hide
Query:  RSYTP---SPP-RGYGRRGRSPSP--------RGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA
        R Y+P   SPP RGYG RGRSP P         G  GGGR      SLLVRN+  DCRPE+LR PF +FG ++D+Y+P+DYY+G+PRGF FV++VD  DA
Subjt:  RSYTP---SPP-RGYGRRGRSPSP--------RGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA

Query:  ADAKHQMDGCVLLGRELTVVFAEENRKKPSDMR------------ARERGSGRFHDRRRSPPRHSRSPAQRHARY---SRSPAPRNARSRSR-----SYD
         +A+  M+     GRE+TVV A E+RK+P +MR            +R+R  GR   R  S  R  R P+   +RY   S SPAPR      R     +Y 
Subjt:  ADAKHQMDGCVLLGRELTVVFAEENRKKPSDMR------------ARERGSGRFHDRRRSPPRHSRSPAQRHARY---SRSPAPRNARSRSR-----SYD

Query:  YASPPPKQRAYSRSVSPRDRR-DSRERSYPRQQS-----GGRSYSRSPRLDGSRSRS
          S  P     + +   RDR  D+  R  P  ++     GGR+ SRSP   GSRSRS
Subjt:  YASPPPKQRAYSRSVSPRDRR-DSRERSYPRQQS-----GGRSYSRSPRLDGSRSRS

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A2.4e-8165.02Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGR+GG R  DLPTSLLVRNLRHDCR EDLRRPF QFG +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKHQMDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERS
         +LLGRELTVVFAEENRKKP++MR R+RG  S RF DRRRSPPR+SRSP          P  R  RSRSRS  Y SPP K R  SRSVSP+DRR  +E  
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERS

Query:  YPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNG---GDRSPSQ
                RSYSRSP  +GSR RS SP R +S S SP R  SP ++RS +  +++S    PR        P G   GDRSPSQ
Subjt:  YPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNG---GDRSPSQ

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL334.0e-8464.17Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GGR RDLPTSLLVRNLRHDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYP
         +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+PPR+       ++R SRSP PR  RSRSRS DY SPPP+ R + RS+SPR+ R        
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYP

Query:  RQQSGGRSYSRSPRLDGSRSRSQSPARG------------------RSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRS-----PRHEEEYRSEPNGG---
            G RSYSRSP  DGSR RS +P RG                  RSRSPSP R +  SP RS SRS  RS+SPRRS     P         P+GG   
Subjt:  RQQSGGRSYSRSPRLDGSRSRSQSPARG------------------RSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRS-----PRHEEEYRSEPNGG---

Query:  -DRSPSQ
         DRSPSQ
Subjt:  -DRSPSQ

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 332.8e-8564.17Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GGR RDLPTSLLVRNLRHDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYP
         +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+PPR+       ++R SRSP PR  RSRSRS DY SPPP+ R + RS+SPR+ R        
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYP

Query:  RQQSGGRSYSRSPRLDGSRSRSQSPARG------------------RSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRS-----PRHEEEYRSEPNGG---
            G RSYSRSP  DGSR RS +P RG                  RSRSPSP R +  SP RS SRS  RS+SPRRS     P         P+GG   
Subjt:  RQQSGGRSYSRSPRLDGSRSRSQSPARG------------------RSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRS-----PRHEEEYRSEPNGG---

Query:  -DRSPSQ
         DRSPSQ
Subjt:  -DRSPSQ

AT1G55310.2 SC35-like splicing factor 333.8e-8270.83Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GGR RDLPTSLLVRNLRHDCR EDLR+ F QFG +KDIYLP+DYYTG+PRGFGFVQ++DPADAADAKH MDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYP
         +LLGRELTVVFAEENRKKP++MRARERG GRF DRRR+PPR+       ++R SRSP PR  RSRSRS DY SPPP+ R + RS+SPR+ R        
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYP

Query:  RQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQS
            G RSYSRSP  DGSR RS +P RG+SRS SP + ++
Subjt:  RQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQS

AT1G55310.3 SC35-like splicing factor 333.2e-8161.56Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTG------------EPRGFGFVQYVDP
        MRGRSYTPSPPRGYGRRGRSPSPRGRY GGR RDLPTSLLVRNLRHDCR EDLR+ F QFG +KDIYLP+DYYTG            +PRGFGFVQ++DP
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTG------------EPRGFGFVQYVDP

Query:  ADAADAKHQMDGCVLLGRELTVVFAEENRKKPSDMRARERGSG-RFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVS
        ADAADAKH MDG +LLGRELTVVFAEENRKKP++MRARERG G RF DRRR+PPR+       ++R SRSP PR  RSRSRS DY SPPP+ R + RS+S
Subjt:  ADAADAKHQMDGCVLLGRELTVVFAEENRKKPSDMRARERGSG-RFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVS

Query:  PRDRRDSRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARG------------------RSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRS-----PRHE
        PR+ R            G RSYSRSP  DGSR RS +P RG                  RSRSPSP R +  SP RS SRS  RS+SPRRS     P   
Subjt:  PRDRRDSRERSYPRQQSGGRSYSRSPRLDGSRSRSQSPARG------------------RSRSPSPMRGQ--SPSRSRSRSVSRSQSPRRS-----PRHE

Query:  EEYRSEPNGG----DRSPSQ
              P+GG    DRSPSQ
Subjt:  EEYRSEPNGG----DRSPSQ

AT3G13570.1 SC35-like splicing factor 30A1.7e-8265.02Show/hide
Query:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG
        MRGRSYTPSPPRGYGRRGRSPSPRGR+GG R  DLPTSLLVRNLRHDCR EDLRRPF QFG +KDIYLP+DYYTG+PRGFGF+Q++DPADAA+AKHQMDG
Subjt:  MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDG

Query:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERS
         +LLGRELTVVFAEENRKKP++MR R+RG  S RF DRRRSPPR+SRSP          P  R  RSRSRS  Y SPP K R  SRSVSP+DRR  +E  
Subjt:  CVLLGRELTVVFAEENRKKPSDMRARERG--SGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERS

Query:  YPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNG---GDRSPSQ
                RSYSRSP  +GSR RS SP R +S S SP R  SP ++RS +  +++S    PR        P G   GDRSPSQ
Subjt:  YPRQQSGGRSYSRSPRLDGSRSRSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNG---GDRSPSQ

AT3G55460.1 SC35-like splicing factor 301.1e-3342.8Show/hide
Query:  RSYTP---SPP-RGYGRRGRSPSP--------RGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA
        R Y+P   SPP RGYG RGRSP P         G  GGGR      SLLVRN+  DCRPE+LR PF +FG ++D+Y+P+DYY+G+PRGF FV++VD  DA
Subjt:  RSYTP---SPP-RGYGRRGRSPSP--------RGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADA

Query:  ADAKHQMDGCVLLGRELTVVFAEENRKKPSDMR------------ARERGSGRFHDRRRSPPRHSRSPAQRHARY---SRSPAPRNARSRSR-----SYD
         +A+  M+     GRE+TVV A E+RK+P +MR            +R+R  GR   R  S  R  R P+   +RY   S SPAPR      R     +Y 
Subjt:  ADAKHQMDGCVLLGRELTVVFAEENRKKPSDMR------------ARERGSGRFHDRRRSPPRHSRSPAQRHARY---SRSPAPRNARSRSR-----SYD

Query:  YASPPPKQRAYSRSVSPRDRR-DSRERSYPRQQS-----GGRSYSRSPRLDGSRSRS
          S  P     + +   RDR  D+  R  P  ++     GGR+ SRSP   GSRSRS
Subjt:  YASPPPKQRAYSRSVSPRDRR-DSRERSYPRQQS-----GGRSYSRSPRLDGSRSRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGGTAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGCAGAAGGGGCCGGAGCCCTAGCCCTAGGGGGCGCTATGGTGGTGGACGTGGGAGAGACCTACCTAC
TAGCCTCCTAGTTCGTAATCTTCGCCATGACTGCAGGCCCGAGGATCTCCGTAGACCATTTGGACAGTTTGGTGCTATTAAGGACATATACCTGCCAAAGGACTATTATA
CTGGAGAACCACGTGGTTTTGGTTTTGTTCAATATGTAGATCCTGCTGATGCTGCAGATGCTAAACATCAGATGGATGGCTGTGTTCTTCTCGGTCGGGAGTTGACTGTG
GTATTTGCTGAGGAAAACAGGAAGAAGCCATCTGATATGAGGGCAAGGGAGAGAGGAAGTGGACGATTTCACGATCGAAGAAGATCTCCTCCACGGCATTCTCGTTCGCC
AGCTCAACGCCATGCAAGGTATTCTCGTTCACCAGCTCCACGCAATGCAAGGTCTCGGTCCCGTAGTTACGATTATGCATCCCCACCACCAAAACAAAGGGCTTACTCCA
GATCAGTGTCCCCTCGTGACAGACGAGATAGTAGAGAGAGGTCATACCCGCGACAGCAGAGCGGTGGTAGGTCATACTCCCGATCTCCACGACTCGATGGTTCGAGAAGT
AGAAGTCAGAGTCCAGCACGGGGCAGAAGTCGAAGTCCGAGTCCTATGAGGGGCCAAAGCCCAAGTAGGAGCAGGAGCAGAAGTGTTAGCCGGAGCCAGAGTCCACGACG
AAGTCCGAGACATGAAGAAGAGTATAGAAGTGAGCCGAATGGAGGAGATAGGAGCCCTAGTCAATAA
mRNA sequenceShow/hide mRNA sequence
CTGATGCCCTAAACTTACAAATCTGGAGCACCGCCGTCTGTTTCTCGATCGGAGATTTCAATTTCATCTTCGAGCCCTAATTTATTCATCTTCAAGGTTTCTCTTTCACT
TTCTCGCTCAAGCATTCTTCACACAGCAATTTCAAATCTCGCTCAGCATATTTATATAATTACTGACCTTCTTGCATCGATCTATTCCCGCTTCACTATTTTGAGGTACA
TCGAGATTCTTGGACAGAGGGCCCCCGTCATTCGTTACTGTACAAATGAGGGGTAGGAGTTATACTCCATCGCCGCCAAGGGGTTATGGCAGAAGGGGCCGGAGCCCTAG
CCCTAGGGGGCGCTATGGTGGTGGACGTGGGAGAGACCTACCTACTAGCCTCCTAGTTCGTAATCTTCGCCATGACTGCAGGCCCGAGGATCTCCGTAGACCATTTGGAC
AGTTTGGTGCTATTAAGGACATATACCTGCCAAAGGACTATTATACTGGAGAACCACGTGGTTTTGGTTTTGTTCAATATGTAGATCCTGCTGATGCTGCAGATGCTAAA
CATCAGATGGATGGCTGTGTTCTTCTCGGTCGGGAGTTGACTGTGGTATTTGCTGAGGAAAACAGGAAGAAGCCATCTGATATGAGGGCAAGGGAGAGAGGAAGTGGACG
ATTTCACGATCGAAGAAGATCTCCTCCACGGCATTCTCGTTCGCCAGCTCAACGCCATGCAAGGTATTCTCGTTCACCAGCTCCACGCAATGCAAGGTCTCGGTCCCGTA
GTTACGATTATGCATCCCCACCACCAAAACAAAGGGCTTACTCCAGATCAGTGTCCCCTCGTGACAGACGAGATAGTAGAGAGAGGTCATACCCGCGACAGCAGAGCGGT
GGTAGGTCATACTCCCGATCTCCACGACTCGATGGTTCGAGAAGTAGAAGTCAGAGTCCAGCACGGGGCAGAAGTCGAAGTCCGAGTCCTATGAGGGGCCAAAGCCCAAG
TAGGAGCAGGAGCAGAAGTGTTAGCCGGAGCCAGAGTCCACGACGAAGTCCGAGACATGAAGAAGAGTATAGAAGTGAGCCGAATGGAGGAGATAGGAGCCCTAGTCAAT
AACCAACCCGCTCGAAAGTTAAGAACAACTATAATGTACTATTGCCATTGTTTAGTTTGAGATTTCCGCTATAGACATCTTTCCTTTGTATTGTTGGTTGGGTAGCGTTT
GTTTGTTCTTAGGATTTTTTATGTGTTATCAAATTGATTGTTGAGTACTTTTTTGCTTTCTTTCGCGGTGTGATGATGCCTTACGAAATACTTCAAGCTCTTCTATCGTT
TTGTTTTCTTTTGGGAA
Protein sequenceShow/hide protein sequence
MRGRSYTPSPPRGYGRRGRSPSPRGRYGGGRGRDLPTSLLVRNLRHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHQMDGCVLLGRELTV
VFAEENRKKPSDMRARERGSGRFHDRRRSPPRHSRSPAQRHARYSRSPAPRNARSRSRSYDYASPPPKQRAYSRSVSPRDRRDSRERSYPRQQSGGRSYSRSPRLDGSRS
RSQSPARGRSRSPSPMRGQSPSRSRSRSVSRSQSPRRSPRHEEEYRSEPNGGDRSPSQ