; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013046 (gene) of Snake gourd v1 genome

Gene IDTan0013046
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRING-type domain-containing protein
Genome locationLG10:4034405..4038815
RNA-Seq ExpressionTan0013046
SyntenyTan0013046
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028749.1 hypothetical protein SDJN02_09930, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-10985.96Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MSFQSRNDLQEWSARVVER TVMDFDLNCPPPDECI+PTG H+EA QYYNHYQGQAMDNP FVDEDIAIISPRKFAEARKNFRRNHFES+CGVA+RRN  
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV
            GA +D+ S  PFTIWP LT   NNVSIQEQTIHNLDLCLSCESSS+ATKATI DTDIPSALAQ+SSS+PPAAA  LRCAICIE LVEETTTKCGHV
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV

Query:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        FC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

XP_022147116.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Momordica charantia]6.3e-11287.82Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MS Q RNDL EW+ARVVERRTVMDFDLNCPPPDECINPTG  EEAAQ++NH+Q QA DNP  VDEDIAIISPRKFAEARKNFRRNHF+S+CGVAVR N N
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRA-TKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH
        TEVYGAL+DV SWPPFTIWP LTI NNNVSI+EQTIHNLDLCLS ESSSRA TKAT  DTDIPSALAQSSS IPP AAPSLRCAICIEPLVEETTTKCGH
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRA-TKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH

Query:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST
        VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFS+
Subjt:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST

XP_022935007.1 uncharacterized protein LOC111441975 [Cucurbita moschata]2.9e-10985.96Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MSFQSRNDLQEWSARVVER TVMDFDLNCPPPDECI+PTG H+EA QYYNHYQGQAMDNP FVDEDIAIISPRKFAEARKNFRRNHFES+CGVA+RRN  
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV
            GA +D+ S  PFTIWP LT   NNVSIQEQTIHNLDLCLSCESSS+ATKATI DTDIPSALAQ+SSS+PPAAA  LRCAICIE LVEETTTKCGHV
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV

Query:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        FC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

XP_022974776.1 E3 ubiquitin-protein ligase BRE1-like [Cucurbita maxima]2.8e-10784.68Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MSFQSRNDLQEWSARVVER TVMDFDLN PPPDECI+PTG H+EA QYYNHYQGQAMDNP FVDEDIAIISPRKFAEARKNFRRNHFES+CGVA+RRN  
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV
            GA +D++S  PFTIWP+LT S NNVSIQEQTIHNLDLCLSCESSS+ATKATI DT IPSALAQ+SSS+PPAA+  LRCAIC+E LVEETTTKCGHV
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV

Query:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        FC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

XP_023540616.1 uncharacterized protein LOC111800927 [Cucurbita pepo subsp. pepo]2.3e-10985.96Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MSFQSRNDLQEWSARVVER TVMDFDLNCPPPDECI+PTG H+EA QYYNHYQGQAMDNP FVDEDIAIISPRKFAEARKNFRRNHFES+CGVA+RRN  
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV
            GA +D+ S  PFTIWP LT + NNVSIQEQTIHNLDLCLSCESSS+ATKATI DTDIPSALAQ+SSS+PPAAA  LRCAICIE LVEETTTKCGHV
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV

Query:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        FC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

TrEMBL top hitse value%identityAlignment
A0A0A0L424 RING-type domain-containing protein8.4e-10281.51Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MS QS NDL +WS+RV+ERRTV+DFDLNCPPPDECI+PTG  +EAAQYYNHYQGQA D    +DEDIAIISPRKFAEARKNFRRNHFES CG  +RRNGN
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQE-QTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH
        TEVYGAL+DV +WPPFTIW  LTIS NNVS+QE QTIHNLDL LSCESSSRATKA   DTDIPS LA  SSSIPP    +LRCAICIEPLVEETTTKCGH
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQE-QTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH

Query:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST
        VFCRNCIETAIATQHRCPICRRKLR+RDIIRIYLPF++
Subjt:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST

A0A5A7U158 E3 ubiquitin-protein ligase RNF4-like1.4e-10181.93Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MS QS NDL +WSARV+ERRTV+DFDLNCPPPDECI+PTG  +EAAQYYNHYQGQA D    +DEDIAIISPRKFAEARKNFRRNHFES  G  +RRNGN
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQE-QTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH
        TEVYGAL+DV +WPPFTIW  LTIS NNVS+QE QTIHNLDL LSCESSSRATKA   DTDIPS LA  SSSIPP    +LRCAICIEPLVEETTTKCGH
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQE-QTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH

Query:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST
        VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF++
Subjt:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST

A0A6J1D1D9 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like3.1e-11287.82Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MS Q RNDL EW+ARVVERRTVMDFDLNCPPPDECINPTG  EEAAQ++NH+Q QA DNP  VDEDIAIISPRKFAEARKNFRRNHF+S+CGVAVR N N
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRA-TKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH
        TEVYGAL+DV SWPPFTIWP LTI NNNVSI+EQTIHNLDLCLS ESSSRA TKAT  DTDIPSALAQSSS IPP AAPSLRCAICIEPLVEETTTKCGH
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRA-TKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGH

Query:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST
        VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFS+
Subjt:  VFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST

A0A6J1F4D6 uncharacterized protein LOC1114419751.4e-10985.96Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MSFQSRNDLQEWSARVVER TVMDFDLNCPPPDECI+PTG H+EA QYYNHYQGQAMDNP FVDEDIAIISPRKFAEARKNFRRNHFES+CGVA+RRN  
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV
            GA +D+ S  PFTIWP LT   NNVSIQEQTIHNLDLCLSCESSS+ATKATI DTDIPSALAQ+SSS+PPAAA  LRCAICIE LVEETTTKCGHV
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV

Query:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        FC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

A0A6J1ICB2 E3 ubiquitin-protein ligase BRE1-like1.3e-10784.68Show/hide
Query:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN
        MSFQSRNDLQEWSARVVER TVMDFDLN PPPDECI+PTG H+EA QYYNHYQGQAMDNP FVDEDIAIISPRKFAEARKNFRRNHFES+CGVA+RRN  
Subjt:  MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGN

Query:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV
            GA +D++S  PFTIWP+LT S NNVSIQEQTIHNLDLCLSCESSS+ATKATI DT IPSALAQ+SSS+PPAA+  LRCAIC+E LVEETTTKCGHV
Subjt:  TEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHV

Query:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF
        FC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Subjt:  FCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF

SwissProt top hitse value%identityAlignment
Q1L5Z9 LON peptidase N-terminal domain and RING finger protein 27.0e-0545.24Show/hide
Query:  CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKL
        CA+C+  L E  TT CGH FC  C+E  +     CP+C+ KL
Subjt:  CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKL

Q6LFN2 RING finger protein PFF0165c7.0e-0538.18Show/hide
Query:  LRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR-CPICRRKLRKRDIIRIYL
        L C++C+E        KCGH++C NCI   + T++R CP C+    K+D+ +I+L
Subjt:  LRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR-CPICRRKLRKRDIIRIYL

Q95KF1 E3 ubiquitin-protein ligase RNF1251.4e-0538.36Show/hide
Query:  AQSSSSIPPAAAP--------------SLRCAICIEPLVEETTTKCGHVFCRNCIETAIA-TQHRCPICRRKL
        + S  S PP+A P              S  CA+C+E L +   T+CGHVFCR+CI T++   +  CP CR  L
Subjt:  AQSSSSIPPAAAP--------------SLRCAICIEPLVEETTTKCGHVFCRNCIETAIA-TQHRCPICRRKL

Q96EQ8 E3 ubiquitin-protein ligase RNF1253.1e-0544.23Show/hide
Query:  PPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIA-TQHRCPICRRKL
        P     S  CA+C+E L +   T+CGHVFCR+CI T++   +  CP CR  L
Subjt:  PPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIA-TQHRCPICRRKL

Q9D9R0 E3 ubiquitin-protein ligase RNF1253.1e-0538.55Show/hide
Query:  LSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR--CPICRRKL
        LS +SS  A  +       P  L +S  S  P    S  C++C+E L +   T+CGHVFCR+CI T+I   ++  CP CR  L
Subjt:  LSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR--CPICRRKL

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein2.0e-1538.46Show/hide
Query:  SSRATKATIDDTDIPSA----LAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        ++R+T+   D T + S       +S +  PP   P   C IC+ P  +E +TKCGH+FC+ CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  SSRATKATIDDTDIPSA----LAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT3G07200.2 RING/U-box superfamily protein2.0e-1538.46Show/hide
Query:  SSRATKATIDDTDIPSA----LAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        ++R+T+   D T + S       +S +  PP   P   C IC+ P  +E +TKCGH+FC+ CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  SSRATKATIDDTDIPSA----LAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT5G48655.1 RING/U-box superfamily protein7.4e-1828.24Show/hide
Query:  RRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADVASWPPFTI
        RR     DLN  P D+                      M +   +++D+   S   FAEA K+  RN       V V   G T                 
Subjt:  RRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADVASWPPFTI

Query:  WPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPI
        +P+      N+S + + I + +  + CE +S       D+ ++ S +++S +  PP   P   C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP 
Subjt:  WPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPI

Query:  CRRKLRKRDIIRIYLP
        CR+K+  +++IR++LP
Subjt:  CRRKLRKRDIIRIYLP

AT5G48655.2 RING/U-box superfamily protein7.4e-1828.24Show/hide
Query:  RRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADVASWPPFTI
        RR     DLN  P D+                      M +   +++D+   S   FAEA K+  RN       V V   G T                 
Subjt:  RRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADVASWPPFTI

Query:  WPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPI
        +P+      N+S + + I + +  + CE +S       D+ ++ S +++S +  PP   P   C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP 
Subjt:  WPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPI

Query:  CRRKLRKRDIIRIYLP
        CR+K+  +++IR++LP
Subjt:  CRRKLRKRDIIRIYLP

AT5G48655.3 RING/U-box superfamily protein7.4e-1828.24Show/hide
Query:  RRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADVASWPPFTI
        RR     DLN  P D+                      M +   +++D+   S   FAEA K+  RN       V V   G T                 
Subjt:  RRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADVASWPPFTI

Query:  WPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPI
        +P+      N+S + + I + +  + CE +S       D+ ++ S +++S +  PP   P   C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP 
Subjt:  WPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPI

Query:  CRRKLRKRDIIRIYLP
        CR+K+  +++IR++LP
Subjt:  CRRKLRKRDIIRIYLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAAGAACAGTAATGGACTTCGACCTAAATTGTCCACCTCCAGATGAGTGCATTAA
TCCAACTGGCCATCATGAGGAAGCAGCACAATACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGGCTTTGTCGACGAGGACATTGCTATTATCTCTCCTAGGA
AATTTGCTGAAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTACCTGTGGTGTAGCCGTCAGACGTAATGGCAACACAGAAGTTTATGGTGCTCTTGCAGATGTA
GCAAGTTGGCCCCCTTTTACAATTTGGCCGTCTCTTACAATTAGCAATAACAACGTATCCATACAGGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGTGAAAG
CAGTAGTAGGGCCACTAAGGCAACAATTGATGACACTGACATTCCTTCTGCACTTGCACAAAGTAGTAGTAGCATCCCACCTGCAGCAGCCCCGAGTTTGCGGTGCGCGA
TCTGCATAGAACCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTTTTCTGCAGGAATTGCATAGAAACGGCCATAGCTACCCAGCACAGATGTCCCATATGTCGG
CGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCCTTTTCAACATGA
mRNA sequenceShow/hide mRNA sequence
GCAAATAAAGAATAATTTCGAGGAAAGGAGGATCGCAAGGATGTAAAGTTTTTCAAAGAAAACACCTCTACATATATGGAATGGAAGCCAAGATTGCTTTTATATCGATT
ACCGCCCCCTCCTTCTCTTCCTCTTTCTCCCTTTTCTTCCCCCATTTTTCCCTCATCTGTTTCTTCGTCTCTGCAAATTTCTTGCGCTTCCTCTTCCGATCGTTCCGCTC
CATCAGCAGTTCGCCGTTCCGTCTTCCGCCAGGTTTGAAAGATAAAAAAAGGCTGTTGGAATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGT
TGAGCGAAGAACAGTAATGGACTTCGACCTAAATTGTCCACCTCCAGATGAGTGCATTAATCCAACTGGCCATCATGAGGAAGCAGCACAATACTACAATCATTACCAAG
GACAAGCTATGGACAATCCCGGCTTTGTCGACGAGGACATTGCTATTATCTCTCCTAGGAAATTTGCTGAAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTACC
TGTGGTGTAGCCGTCAGACGTAATGGCAACACAGAAGTTTATGGTGCTCTTGCAGATGTAGCAAGTTGGCCCCCTTTTACAATTTGGCCGTCTCTTACAATTAGCAATAA
CAACGTATCCATACAGGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAGGCAACAATTGATGACACTGACATTCCTTCTG
CACTTGCACAAAGTAGTAGTAGCATCCCACCTGCAGCAGCCCCGAGTTTGCGGTGCGCGATCTGCATAGAACCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTT
TTCTGCAGGAATTGCATAGAAACGGCCATAGCTACCCAGCACAGATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCCTTTTCAAC
ATGAAAAAAGAATGAATACAACACAAGAATATTGCATCTGTATTCTTTTTCTGATGATGATGATGATGATTTAGGTTTGTACTACTACTTGCACACAGTTGCATTAACAA
GTATAGATTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTCTTCATCATCTGTATTGAATGAGAACTATAAACAAAAATTAAAAGCTCTTTGGTGAGGTGTTTGTATT
TGACTGAAAAAAGACAGGCGGTTGGTTGATTCATTAAAAATAGTTTATTGATTAATTAGAAGGGGAATGAATTTATGGCTCTGTTTTGTGTT
Protein sequenceShow/hide protein sequence
MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADV
ASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICR
RKLRKRDIIRIYLPFST