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Tan0013057 (gene) of Snake gourd v1 genome

Gene IDTan0013057
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationContig00127:105622..109990
RNA-Seq ExpressionTan0013057
SyntenyTan0013057
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3773510.1 hypothetical protein EJ110_NYTH47861 [Nymphaea thermarum]2.7e-1074.55Show/hide
Query:  IPNFLAEVDLPQAHPMDSADTLRLKADIILES-YLDSLTRERYTW-LDVTQSLAQ
        IPNFLAEVDLPQAHPMDSADTLRLKA +ILES + DSLTRER TW +D+   + Q
Subjt:  IPNFLAEVDLPQAHPMDSADTLRLKADIILES-YLDSLTRERYTW-LDVTQSLAQ

KAF3973007.1 hypothetical protein CMV_003551 [Castanea mollissima]1.5e-2146.79Show/hide
Query:  REEGPEFEPDSKRAKLDDETTSSSNLIAPELVPEPEAPLILEKPKRMKFQISQLK--------LKNHIPTQPQIP-NFLAEVDLPQAHPMDSADTLRLKA
        +  GPEF PD     L     S S+   PE +  P     L+K + + F+IS  +          +  P Q QIP  +L +VDLPQ+HPMDSADTLR+KA
Subjt:  REEGPEFEPDSKRAKLDDETTSSSNLIAPELVPEPEAPLILEKPKRMKFQISQLK--------LKNHIPTQPQIP-NFLAEVDLPQAHPMDSADTLRLKA

Query:  DIILESYLD---SLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE
         +ILE + D    + RE+Y+W DV Q+LAQR+S GDIVTR+D+S+L+DQL NPGSE
Subjt:  DIILESYLD---SLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE

RXH88095.1 hypothetical protein DVH24_042166 [Malus domestica]5.5e-3284.62Show/hide
Query:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE
        +LKNHI TQPQIPNFLAEVDLPQAHP+DSADTLRLKA    ESY  DSLTR+RYTWLD+ QSLAQRVSSGDIVTRDD SMLLDQL NPGSE
Subjt:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE

RXH92256.1 hypothetical protein DVH24_033152 [Malus domestica]2.2e-2077.78Show/hide
Query:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDI
        KLKNHI  QPQIPNF+A++DLPQAHP+DSA+TLRLKA    ESY  DSLTR+RYTWLD+ QSLAQRVSSGDI
Subjt:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDI

XP_020208959.1 uncharacterized protein LOC109793905 [Cajanus cajan]1.4e-0640.7Show/hide
Query:  QPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYLDSLTRERYTWLDVTQSLA---QRVSSGDIVTRDDISMLLDQLHNPGSEN
        +P I N++ +VDLPQ  P D+ + LR K  IILES+  S +R+  TW D+ Q LA   +  ++    TR+D   LL +L+NPG  +
Subjt:  QPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYLDSLTRERYTWLDVTQSLA---QRVSSGDIVTRDDISMLLDQLHNPGSEN

TrEMBL top hitse value%identityAlignment
A0A151UGR6 Uncharacterized protein6.6e-0740.7Show/hide
Query:  QPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYLDSLTRERYTWLDVTQSLA---QRVSSGDIVTRDDISMLLDQLHNPGSEN
        +P I N++ +VDLPQ  P D+ + LR K  IILES+  S +R+  TW D+ Q LA   +  ++    TR+D   LL +L+NPG  +
Subjt:  QPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYLDSLTRERYTWLDVTQSLA---QRVSSGDIVTRDDISMLLDQLHNPGSEN

A0A2P2MW32 Uncharacterized protein1.7e-0743.16Show/hide
Query:  LKNHIPTQPQIP-----NFLAEVDLPQAHPMDSADTLRLKADIILESYLDSLTRERYTWLDVTQSLA--QRVSSGDIVTRDDISMLLDQLHNPGS
        L  H PT+  +P     N++ E DLPQAHP D+ + LR K  IILES+  +  RE  T+LD+ Q LA   + S GD V+R D   LL  L +P +
Subjt:  LKNHIPTQPQIP-----NFLAEVDLPQAHPMDSADTLRLKADIILESYLDSLTRERYTWLDVTQSLA--QRVSSGDIVTRDDISMLLDQLHNPGS

A0A498J0D7 Uncharacterized protein2.7e-3284.62Show/hide
Query:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE
        +LKNHI TQPQIPNFLAEVDLPQAHP+DSADTLRLKA    ESY  DSLTR+RYTWLD+ QSLAQRVSSGDIVTRDD SMLLDQL NPGSE
Subjt:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE

A0A498JAU7 Uncharacterized protein1.1e-2077.78Show/hide
Query:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDI
        KLKNHI  QPQIPNF+A++DLPQAHP+DSA+TLRLKA    ESY  DSLTR+RYTWLD+ QSLAQRVSSGDI
Subjt:  KLKNHIPTQPQIPNFLAEVDLPQAHPMDSADTLRLKADIILESYL-DSLTRERYTWLDVTQSLAQRVSSGDI

A0A5K1CTB0 Uncharacterized protein (Fragment)8.1e-1380Show/hide
Query:  ADIILES-YLDSLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE
        A +ILES + DSLTRER TWLDV QSLAQ+VSSGDIVTRDD+SMLLD LHNP SE
Subjt:  ADIILES-YLDSLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAACACAGCCCTTTCAGTTGCTCTCTACACGGTGACTGTCCTTTTGGGTGTTACCTTATCATATATTTGCCGTAGAGGTTCATTTTCCTCACTCAGGAAACG
AGAAAGGGAGGAGGGCCCTGAATTTGAGCCCGATTCCAAGCGAGCGAAATTGGATGACGAAACAACATCGTCATCTAATCTAATTGCTCCTGAACTCGTCCCTGAGCCTG
AGGCCCCCCTTATACTGGAAAAGCCAAAGAGAATGAAATTTCAGATTAGTCAATTGAAATTGAAGAACCACATCCCGACCCAGCCACAAATCCCGAACTTTTTGGCTGAA
GTCGACCTGCCACAGGCGCATCCGATGGATTCCGCGGATACTTTGCGCTTAAAGGCTGATATCATTCTGGAGTCGTATTTGGATTCCCTTACTCGTGAGCGATACACCTG
GTTAGACGTAACACAAAGTCTTGCTCAAAGGGTCAGCTCCGGGGATATAGTAACTCGAGATGATATCAGTATGCTGCTCGACCAGTTGCATAATCCGGGCAGTGAAAACG
GAGGAGTTCAGTGTAGTCGGATGGAAGGGAAGCGCATATCGGAAACGAATCGGGCATCTATGGAAAGAATAAACCTTCTGCGTTGTCTAGAAATGCAAATGGAATCCTAT
TTCTATGCCTTCCGAAACTCGGTTTTAGGCTTTAACCTTCCCCTTAGGACCAAGCAAGGGCTGACATTAGCGAATGCTCATAACGTCCTTGCTTTCTCGATATCAGTAAT
TAAGGATCTCTCCTCCTTCTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAACACAGCCCTTTCAGTTGCTCTCTACACGGTGACTGTCCTTTTGGGTGTTACCTTATCATATATTTGCCGTAGAGGTTCATTTTCCTCACTCAGGAAACG
AGAAAGGGAGGAGGGCCCTGAATTTGAGCCCGATTCCAAGCGAGCGAAATTGGATGACGAAACAACATCGTCATCTAATCTAATTGCTCCTGAACTCGTCCCTGAGCCTG
AGGCCCCCCTTATACTGGAAAAGCCAAAGAGAATGAAATTTCAGATTAGTCAATTGAAATTGAAGAACCACATCCCGACCCAGCCACAAATCCCGAACTTTTTGGCTGAA
GTCGACCTGCCACAGGCGCATCCGATGGATTCCGCGGATACTTTGCGCTTAAAGGCTGATATCATTCTGGAGTCGTATTTGGATTCCCTTACTCGTGAGCGATACACCTG
GTTAGACGTAACACAAAGTCTTGCTCAAAGGGTCAGCTCCGGGGATATAGTAACTCGAGATGATATCAGTATGCTGCTCGACCAGTTGCATAATCCGGGCAGTGAAAACG
GAGGAGTTCAGTGTAGTCGGATGGAAGGGAAGCGCATATCGGAAACGAATCGGGCATCTATGGAAAGAATAAACCTTCTGCGTTGTCTAGAAATGCAAATGGAATCCTAT
TTCTATGCCTTCCGAAACTCGGTTTTAGGCTTTAACCTTCCCCTTAGGACCAAGCAAGGGCTGACATTAGCGAATGCTCATAACGTCCTTGCTTTCTCGATATCAGTAAT
TAAGGATCTCTCCTCCTTCTGGTAG
Protein sequenceShow/hide protein sequence
MEENTALSVALYTVTVLLGVTLSYICRRGSFSSLRKREREEGPEFEPDSKRAKLDDETTSSSNLIAPELVPEPEAPLILEKPKRMKFQISQLKLKNHIPTQPQIPNFLAE
VDLPQAHPMDSADTLRLKADIILESYLDSLTRERYTWLDVTQSLAQRVSSGDIVTRDDISMLLDQLHNPGSENGGVQCSRMEGKRISETNRASMERINLLRCLEMQMESY
FYAFRNSVLGFNLPLRTKQGLTLANAHNVLAFSISVIKDLSSFW