; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013100 (gene) of Snake gourd v1 genome

Gene IDTan0013100
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationLG02:9307925..9313008
RNA-Seq ExpressionTan0013100
SyntenyTan0013100
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-3931.01Show/hide
Query:  VIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLD
        +I+ +  E   K   E  +  +  QE  +  E++++GWTVVTRRKKR+ +  QKESRL+ +++R NK+QK K+K+ T+K      +D++  R ++++TL 
Subjt:  VIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLD

Query:  EFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNSSSFSIEDLL---------------------------------------------SLP
        +FFP  FL   Q+E   VVA     +   P   YE+T     S  FS EDLL                                              + 
Subjt:  EFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNSSSFSIEDLL---------------------------------------------SLP

Query:  QAAKSALI--------EALIDS-----------------------DN-------AKETIKCTNGPALRNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSR
        + + S L+        + +ID+                       DN       ++E+ K T       +E ST+ AKS I+ DE ++  P+LRYVPLSR
Subjt:  QAAKSALI--------EALIDS-----------------------DN-------AKETIKCTNGPALRNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSR

Query:  RKKGESPFAECTKSL------------------------------------------------------------------------TLSLTQKKHLKEG
        RKKGESPF E  + L                                                                         LS TQKK L+EG
Subjt:  RKKGESPFAECTKSL------------------------------------------------------------------------TLSLTQKKHLKEG

Query:  YNIPTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPT
        + IP SRKGLGYK PEP+RI RKGK KV D+NHI V+EVD  +EKE  +QRTS F R+ P VAR    +RLS  + E ++    S   R S   R+ M  
Subjt:  YNIPTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPT

Query:  ETE
        + E
Subjt:  ETE

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-1046.94Show/hide
Query:  QSKEASNQDVMSVMMADVESDERMTEMERKISLLMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQE
        +SK+ ++ DVMSVMMAD+  +  M EMERKI+ LMKAVEERD EI  L+ QM+ RETAESSQTP    + +   V   ++P  ++     +  Q +Q+
Subjt:  QSKEASNQDVMSVMMADVESDERMTEMERKISLLMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQE

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.8e-3926.66Show/hide
Query:  ERKISL-LMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQK
        E++I L L +  +    E+  +     +R   E  ++   FG+FEP++V    E S ++           Q   +  E++++GW VVT RKKRQ    Q+
Subjt:  ERKISL-LMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQK

Query:  ESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIED---PSCLYETTTELGNSSSFSIEDL
        ESR +++++R NK+QK K+K+ T K      ED N  RP++L+TL +F PK+FL   Q+E  EVVACH   T E+   P    E      + S F++EDL
Subjt:  ESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIED---PSCLYETTTELGNSSSFSIEDL

Query:  LSLPQAAKSALIEALIDS----------------------------------------------DNAKETIKCTNGPAL---------------------
        LSLPQ  K+ LI+AL++S                                              +   + I   NG A+                     
Subjt:  LSLPQAAKSALIEALIDS----------------------------------------------DNAKETIKCTNGPAL---------------------

Query:  ------------------------------------------------------------------------------------------------RNN-
                                                                                                        +NN 
Subjt:  ------------------------------------------------------------------------------------------------RNN-

Query:  ----------------------------------------EVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------------
                                                E  T+  K  ILKDE +  +PVLRYVPLSRRKKGESPF E  K L               
Subjt:  ----------------------------------------EVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------------

Query:  ---------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVAD
                                                                  LS TQKK L+EG++IP SRKGLGYKSPEP+RI +KGK KV D
Subjt:  ---------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVAD

Query:  ANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSA
         NHI +EE D++D KE   QR SVF R+ P VARP   +RLS T+ E E    V    R S   R+      E S   ALT  + RPS    L       
Subjt:  ANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSA

Query:  GRESRRPAF
         +  R P F
Subjt:  GRESRRPAF

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-4029.55Show/hide
Query:  FGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPR
        FG+FEPV+V  + E + ++SQE   +++ I+E ++R       WT+VTRRKKR+ +  QKE R +R+++R NK+QK K+K+ T+K     +ED++  R +
Subjt:  FGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPR

Query:  QLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNS---SSFSIEDLLSLPQAAKSALIEALIDS----------------------
        +LITL +FFP  FL   Q+E   VVACH     E+ S    +  E   S   S F+++DLLSLPQ  K+ LI AL++S                      
Subjt:  QLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNS---SSFSIEDLLSLPQAAKSALIEALIDS----------------------

Query:  ---------------------------------DN--------------------------------------------------------------AKE
                                         DN                                                              AK 
Subjt:  ---------------------------------DN--------------------------------------------------------------AKE

Query:  TIKCTNGPAL---------------------------------RNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------
         +K  + P +                                   +E ST+ AKS IL DE ++   +LRYVPLSRRKKGESPF E  + L         
Subjt:  TIKCTNGPAL---------------------------------RNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------

Query:  ---------------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKG
                                                                        LS TQKK L+EG+ IP SRKGLGYK PEP+RI RKG
Subjt:  ---------------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKG

Query:  KAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRI
        K K+ D+NHI V+EVD   EKE  +QRTS F R+ P VAR    +RLS T+ E +     S   R SA  R+
Subjt:  KAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRI

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]9.8e-3926.66Show/hide
Query:  ERKISL-LMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQK
        E++I L L +  +    E+  +     +R   E  ++   FG+FEP++V    E S ++           Q   +  E++++GW VVT RKKRQ    Q+
Subjt:  ERKISL-LMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQK

Query:  ESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIED---PSCLYETTTELGNSSSFSIEDL
        ESR +++++R NK+QK K+K+ T K      ED N  RP++L+TL +F PK+FL   Q+E  EVVACH   T E+   P    E      + S F++EDL
Subjt:  ESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIED---PSCLYETTTELGNSSSFSIEDL

Query:  LSLPQAAKSALIEALIDS----------------------------------------------DNAKETIKCTNGPAL---------------------
        LSLPQ  K+ LI+AL++S                                              +   + I   NG A+                     
Subjt:  LSLPQAAKSALIEALIDS----------------------------------------------DNAKETIKCTNGPAL---------------------

Query:  ------------------------------------------------------------------------------------------------RNN-
                                                                                                        +NN 
Subjt:  ------------------------------------------------------------------------------------------------RNN-

Query:  ----------------------------------------EVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------------
                                                E  T+  K  ILKDE +  +PVLRYVPLSRRKKGESPF E  K L               
Subjt:  ----------------------------------------EVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------------

Query:  ---------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVAD
                                                                  LS TQKK L+EG++IP SRKGLGYKSPEP+RI +KGK KV D
Subjt:  ---------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVAD

Query:  ANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSA
         NHI +EE D++D KE   QR SVF R+ P VARP   +RLS T+ E E    V    R S   R+      E S   ALT  + RPS    L       
Subjt:  ANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSA

Query:  GRESRRPAF
         +  R P F
Subjt:  GRESRRPAF

XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]9.8e-3926.66Show/hide
Query:  ERKISL-LMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQK
        E++I L L +  +    E+  +     +R   E  ++   FG+FEP++V    E S ++           Q   +  E++++GW VVT RKKRQ    Q+
Subjt:  ERKISL-LMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQK

Query:  ESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIED---PSCLYETTTELGNSSSFSIEDL
        ESR +++++R NK+QK K+K+ T K      ED N  RP++L+TL +F PK+FL   Q+E  EVVACH   T E+   P    E      + S F++EDL
Subjt:  ESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIED---PSCLYETTTELGNSSSFSIEDL

Query:  LSLPQAAKSALIEALIDS----------------------------------------------DNAKETIKCTNGPAL---------------------
        LSLPQ  K+ LI+AL++S                                              +   + I   NG A+                     
Subjt:  LSLPQAAKSALIEALIDS----------------------------------------------DNAKETIKCTNGPAL---------------------

Query:  ------------------------------------------------------------------------------------------------RNN-
                                                                                                        +NN 
Subjt:  ------------------------------------------------------------------------------------------------RNN-

Query:  ----------------------------------------EVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------------
                                                E  T+  K  ILKDE +  +PVLRYVPLSRRKKGESPF E  K L               
Subjt:  ----------------------------------------EVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------------

Query:  ---------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVAD
                                                                  LS TQKK L+EG++IP SRKGLGYKSPEP+RI +KGK KV D
Subjt:  ---------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVAD

Query:  ANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSA
         NHI +EE D++D KE   QR SVF R+ P VARP   +RLS T+ E E    V    R S   R+      E S   ALT  + RPS    L       
Subjt:  ANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSA

Query:  GRESRRPAF
         +  R P F
Subjt:  GRESRRPAF

TrEMBL top hitse value%identityAlignment
A0A5A7TPR5 RNase H domain-containing protein1.9e-3245.19Show/hide
Query:  RNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL--------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVADA
        R  E ST+  KS IL DE ++   +LRYVPLSRR+KGESPF +  + L         LSL QKK L+EG+ IP SRKG GYKSPEP+ IIRK K KV D+
Subjt:  RNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL--------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVADA

Query:  NHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSAG
        NHI V EVD  +EKE  +QR S F ++ P V R +  +RLS T+ E +     S   + SAL R+ M  + E     AL   + RPS    L        
Subjt:  NHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSAG

Query:  RESRRPAF
        +  R P F
Subjt:  RESRRPAF

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.1e-3931.01Show/hide
Query:  VIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLD
        +I+ +  E   K   E  +  +  QE  +  E++++GWTVVTRRKKR+ +  QKESRL+ +++R NK+QK K+K+ T+K      +D++  R ++++TL 
Subjt:  VIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLD

Query:  EFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNSSSFSIEDLL---------------------------------------------SLP
        +FFP  FL   Q+E   VVA     +   P   YE+T     S  FS EDLL                                              + 
Subjt:  EFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNSSSFSIEDLL---------------------------------------------SLP

Query:  QAAKSALI--------EALIDS-----------------------DN-------AKETIKCTNGPALRNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSR
        + + S L+        + +ID+                       DN       ++E+ K T       +E ST+ AKS I+ DE ++  P+LRYVPLSR
Subjt:  QAAKSALI--------EALIDS-----------------------DN-------AKETIKCTNGPALRNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSR

Query:  RKKGESPFAECTKSL------------------------------------------------------------------------TLSLTQKKHLKEG
        RKKGESPF E  + L                                                                         LS TQKK L+EG
Subjt:  RKKGESPFAECTKSL------------------------------------------------------------------------TLSLTQKKHLKEG

Query:  YNIPTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPT
        + IP SRKGLGYK PEP+RI RKGK KV D+NHI V+EVD  +EKE  +QRTS F R+ P VAR    +RLS  + E ++    S   R S   R+ M  
Subjt:  YNIPTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPT

Query:  ETE
        + E
Subjt:  ETE

A0A5D3BY54 Ty3-gypsy retrotransposon protein7.1e-1146.94Show/hide
Query:  QSKEASNQDVMSVMMADVESDERMTEMERKISLLMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQE
        +SK+ ++ DVMSVMMAD+  +  M EMERKI+ LMKAVEERD EI  L+ QM+ RETAESSQTP    + +   V   ++P  ++     +  Q +Q+
Subjt:  QSKEASNQDVMSVMMADVESDERMTEMERKISLLMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQE

A0A5D3BY54 Ty3-gypsy retrotransposon protein6.6e-3341.88Show/hide
Query:  NEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL--------------------------------------TLSLTQKKHLKEGYNI
        +E STN AKS IL DE ++  P+LRYVPLSRRKKGESPF E  + L                                       LS TQKK L+EG+ I
Subjt:  NEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL--------------------------------------TLSLTQKKHLKEGYNI

Query:  PTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETE
        P SRKGLGYKSPEP+RI RKGK KV D NHI V+EVD  +EKE   QRTS F R+ P VAR    +RLS T+ + +     S   R SA  R+ +  + E
Subjt:  PTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETE

Query:  GSVLLALTPDSVRPSVLSNLDSQHCSAGRESRRP
          +    T  + +PS    L        +  R P
Subjt:  GSVLLALTPDSVRPSVLSNLDSQHCSAGRESRRP

A0A5D3C0W6 Ty3-gypsy retrotransposon protein6.6e-4129.55Show/hide
Query:  FGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPR
        FG+FEPV+V  + E + ++SQE   +++ I+E ++R       WT+VTRRKKR+ +  QKE R +R+++R NK+QK K+K+ T+K     +ED++  R +
Subjt:  FGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKESRLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPR

Query:  QLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNS---SSFSIEDLLSLPQAAKSALIEALIDS----------------------
        +LITL +FFP  FL   Q+E   VVACH     E+ S    +  E   S   S F+++DLLSLPQ  K+ LI AL++S                      
Subjt:  QLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNS---SSFSIEDLLSLPQAAKSALIEALIDS----------------------

Query:  ---------------------------------DN--------------------------------------------------------------AKE
                                         DN                                                              AK 
Subjt:  ---------------------------------DN--------------------------------------------------------------AKE

Query:  TIKCTNGPAL---------------------------------RNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------
         +K  + P +                                   +E ST+ AKS IL DE ++   +LRYVPLSRRKKGESPF E  + L         
Subjt:  TIKCTNGPAL---------------------------------RNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL---------

Query:  ---------------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKG
                                                                        LS TQKK L+EG+ IP SRKGLGYK PEP+RI RKG
Subjt:  ---------------------------------------------------------------TLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKG

Query:  KAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRI
        K K+ D+NHI V+EVD   EKE  +QRTS F R+ P VAR    +RLS T+ E +     S   R SA  R+
Subjt:  KAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRI

A0A5D3DXC7 Reverse transcriptase domain-containing protein4.3e-3240.16Show/hide
Query:  NEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL------------------------------------------------TLSLTQ
        +E STN AKS IL DE ++  P+LRYVPLSRRKKGESPF E  + L                                                 LS TQ
Subjt:  NEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSL------------------------------------------------TLSLTQ

Query:  KKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSAL
        KK L+EG+ IP SRKGLGYKSPEP+RI RKGK KV D+NHI V+EVD  +EKE   QRTS F R+ P VAR    +RLS T+ E +     S   + SA 
Subjt:  KKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVADANHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSAL

Query:  MRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSAGRESRRP
         R+ +  + E  +    T  + +PS    L        +  R P
Subjt:  MRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSAGRESRRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGGGTAAAATAAATAAAACCCAAATCCAAATGATTAGGCCCAAATCCAATAAAGCCCAAGTTCAGGTGTTAAGCACTCCGCGAAGACCAAATATTCTTCCAAT
AAAACAATGGAATCAAAGAAGGTTGCATCAACTGCTGCTACTGCCGCAAGCAACACCTAATACAGGGCCAATAAAGGAGGACCGAACCCCTGATGCGATTGCAAACAAGA
TCGTCAAGTTGATTGAAGGATCCTCCAAGGATAGAGTGTTTACCCCTGTTGTCGGTCAATCAAAGGAGGCATCGAATCAAGATGTGATGTCTGTGATGATGGCCGATGTG
GAATCCGACGAAAGGATGACAGAGATGGAGAGAAAGATTAGTCTCCTGATGAAGGCGGTTGAAGAAAGGGATCTAGAGATTGCCTACTTGAAGAATCAAATGCAGAATCG
CGAGACTGCTGAGTCAAGTCAAACCCCTTTCGGATTCGGATCCTTTGAACCTGTCATTGTGTGGATGAATGATGAACCCTCGAGTAAGAATTCTCAAGAGGGAGGCATCC
AAAAGCAGTACATTCAAGAAACGAATAAGCGGACCGAAGATGAAAACAAAGGTTGGACTGTCGTGACTCGTCGCAAGAAGCGACAACAAAGTTACGCACAGAAGGAATCG
CGACTATTCCGACACCATAAGAGAAAAAACAAGTCGCAAAAGAAGAAAAGAAAACAGGTCACAAAGAAGCCTGTTTACGCCATGAGGGAAGACGAAAACCTCTTCCGCCC
ACGACAACTGATAACTTTGGATGAATTCTTTCCAAAGAATTTCCTAAGTAAAGGCCAGGAGGAGGCGTTTGAGGTAGTTGCGTGTCACGTTACCGGTACGATTGAAGATC
CTTCATGCTTGTATGAGACGACAACAGAGTTAGGAAACTCATCCTCATTTAGTATAGAGGACTTGTTGTCACTCCCCCAAGCAGCCAAGAGTGCTCTTATCGAGGCATTG
ATAGACTCTGACAATGCAAAAGAAACTATCAAATGTACAAATGGGCCTGCTCTGAGAAACAACGAAGTCTCTACGAATTTCGCAAAGTCTGAAATTTTGAAAGATGAAGG
AAGCACAACCTCTCCTGTTTTGCGTTACGTTCCTTTGTCTCGACGAAAGAAGGGTGAGTCACCATTTGCAGAGTGCACAAAAAGCCTGACTCTCTCATTAACACAAAAAA
AGCATTTAAAGGAAGGTTATAATATCCCTACGTCAAGGAAAGGACTGGGATATAAGTCTCCTGAGCCGGTCCGCATAATAAGAAAAGGGAAGGCAAAGGTGGCAGACGCA
AACCACATAATAGTGGAAGAGGTAGACGATTCAGATGAAAAGGAAAACGTTACCCAAAGGACTTCTGTTTTTAGCCGCGTCGGGCCGTTGGTGGCACGACCTTCAGCCCT
CCAACGATTGAGCACCACTCAAGTAGAAGAAGAGTGGTCACCTCCTGTTTCTGGTTCCACTCGAACCTCAGCCCTCATGAGGATAAGGATGCCCACTGAAACAGAAGGAA
GCGTTTTACTAGCCCTTACACCTGACTCCGTTCGACCTTCCGTCCTATCCAACTTGGATAGCCAACATTGTTCTGCCGGAAGAGAGAGCAGGCGACCAGCGTTTGCGTCG
ACTTTCGTGACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGGGTAAAATAAATAAAACCCAAATCCAAATGATTAGGCCCAAATCCAATAAAGCCCAAGTTCAGGTGTTAAGCACTCCGCGAAGACCAAATATTCTTCCAAT
AAAACAATGGAATCAAAGAAGGTTGCATCAACTGCTGCTACTGCCGCAAGCAACACCTAATACAGGGCCAATAAAGGAGGACCGAACCCCTGATGCGATTGCAAACAAGA
TCGTCAAGTTGATTGAAGGATCCTCCAAGGATAGAGTGTTTACCCCTGTTGTCGGTCAATCAAAGGAGGCATCGAATCAAGATGTGATGTCTGTGATGATGGCCGATGTG
GAATCCGACGAAAGGATGACAGAGATGGAGAGAAAGATTAGTCTCCTGATGAAGGCGGTTGAAGAAAGGGATCTAGAGATTGCCTACTTGAAGAATCAAATGCAGAATCG
CGAGACTGCTGAGTCAAGTCAAACCCCTTTCGGATTCGGATCCTTTGAACCTGTCATTGTGTGGATGAATGATGAACCCTCGAGTAAGAATTCTCAAGAGGGAGGCATCC
AAAAGCAGTACATTCAAGAAACGAATAAGCGGACCGAAGATGAAAACAAAGGTTGGACTGTCGTGACTCGTCGCAAGAAGCGACAACAAAGTTACGCACAGAAGGAATCG
CGACTATTCCGACACCATAAGAGAAAAAACAAGTCGCAAAAGAAGAAAAGAAAACAGGTCACAAAGAAGCCTGTTTACGCCATGAGGGAAGACGAAAACCTCTTCCGCCC
ACGACAACTGATAACTTTGGATGAATTCTTTCCAAAGAATTTCCTAAGTAAAGGCCAGGAGGAGGCGTTTGAGGTAGTTGCGTGTCACGTTACCGGTACGATTGAAGATC
CTTCATGCTTGTATGAGACGACAACAGAGTTAGGAAACTCATCCTCATTTAGTATAGAGGACTTGTTGTCACTCCCCCAAGCAGCCAAGAGTGCTCTTATCGAGGCATTG
ATAGACTCTGACAATGCAAAAGAAACTATCAAATGTACAAATGGGCCTGCTCTGAGAAACAACGAAGTCTCTACGAATTTCGCAAAGTCTGAAATTTTGAAAGATGAAGG
AAGCACAACCTCTCCTGTTTTGCGTTACGTTCCTTTGTCTCGACGAAAGAAGGGTGAGTCACCATTTGCAGAGTGCACAAAAAGCCTGACTCTCTCATTAACACAAAAAA
AGCATTTAAAGGAAGGTTATAATATCCCTACGTCAAGGAAAGGACTGGGATATAAGTCTCCTGAGCCGGTCCGCATAATAAGAAAAGGGAAGGCAAAGGTGGCAGACGCA
AACCACATAATAGTGGAAGAGGTAGACGATTCAGATGAAAAGGAAAACGTTACCCAAAGGACTTCTGTTTTTAGCCGCGTCGGGCCGTTGGTGGCACGACCTTCAGCCCT
CCAACGATTGAGCACCACTCAAGTAGAAGAAGAGTGGTCACCTCCTGTTTCTGGTTCCACTCGAACCTCAGCCCTCATGAGGATAAGGATGCCCACTGAAACAGAAGGAA
GCGTTTTACTAGCCCTTACACCTGACTCCGTTCGACCTTCCGTCCTATCCAACTTGGATAGCCAACATTGTTCTGCCGGAAGAGAGAGCAGGCGACCAGCGTTTGCGTCG
ACTTTCGTGACCTGA
Protein sequenceShow/hide protein sequence
MELGKINKTQIQMIRPKSNKAQVQVLSTPRRPNILPIKQWNQRRLHQLLLLPQATPNTGPIKEDRTPDAIANKIVKLIEGSSKDRVFTPVVGQSKEASNQDVMSVMMADV
ESDERMTEMERKISLLMKAVEERDLEIAYLKNQMQNRETAESSQTPFGFGSFEPVIVWMNDEPSSKNSQEGGIQKQYIQETNKRTEDENKGWTVVTRRKKRQQSYAQKES
RLFRHHKRKNKSQKKKRKQVTKKPVYAMREDENLFRPRQLITLDEFFPKNFLSKGQEEAFEVVACHVTGTIEDPSCLYETTTELGNSSSFSIEDLLSLPQAAKSALIEAL
IDSDNAKETIKCTNGPALRNNEVSTNFAKSEILKDEGSTTSPVLRYVPLSRRKKGESPFAECTKSLTLSLTQKKHLKEGYNIPTSRKGLGYKSPEPVRIIRKGKAKVADA
NHIIVEEVDDSDEKENVTQRTSVFSRVGPLVARPSALQRLSTTQVEEEWSPPVSGSTRTSALMRIRMPTETEGSVLLALTPDSVRPSVLSNLDSQHCSAGRESRRPAFAS
TFVT