; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013139 (gene) of Snake gourd v1 genome

Gene IDTan0013139
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationLG06:75091330..75091749
RNA-Seq ExpressionTan0013139
SyntenyTan0013139
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]1.2e-4164.23Show/hide
Query:  FSTLVLSLLISLFFVNLFTVEG--FYDPPTVTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKA
        FST  LSL ISL F  +FT+EG  F  PP VTVNITNAL+   NQLT+HCKSGDDDLG+HQL  L SY F+FRPNF+G+TLFYC+F W GS HYF IY+ 
Subjt:  FSTLVLSLLISLFFVNLFTVEG--FYDPPTVTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKA

Query:  KRDKWLCTD--CFWIVGEKSLCLFNADTRKYDICYTW
         RD+  C D  C WIVGE+ LC+F+  T  YDICYTW
Subjt:  KRDKWLCTD--CFWIVGEKSLCLFNADTRKYDICYTW

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]8.2e-3562.96Show/hide
Query:  VTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--TDCFWIVGEKSLCLFNADTRK
        +TVNITN +    NQLTVHCKSGDDDLG+H+LP L SY F+FRPNF+G+TLFYC FQW    HYF+IYK  RD   C  T C WI+ EK +C+FN DT+ 
Subjt:  VTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--TDCFWIVGEKSLCLFNADTRK

Query:  YDICYTWP
        YD CY WP
Subjt:  YDICYTWP

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]4.2e-3965.29Show/hide
Query:  LFTVEGF-YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD-CFWIVGEK
        LFT+EG  +  P VTVNITNAL  ++QLTVHCKSGDDDLGIHQL PL  Y F+FRPNF GTTLFYC+FQWPG  H F+IYK  RD+  C   C WIVGE+
Subjt:  LFTVEGF-YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD-CFWIVGEK

Query:  SLCLFNADTRKYDICYTWPPK
         +C+F+  T+KYD CYTW  K
Subjt:  SLCLFNADTRKYDICYTWPPK

XP_022138779.1 S-protein homolog 5 [Momordica charantia]4.0e-4266.67Show/hide
Query:  SLLISLFFVNLFT-----VEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK
        SL++SL F+ LF+     VE        +VNITN LES  QLTVHCKS DDDLG HQLPPL SY F FRPN + +TLF+CSFQWPGSFHYFEIY  KRD+
Subjt:  SLLISLFFVNLFT-----VEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK

Query:  WLCTDCFWIVGEKSLCLFNADTRKYDICYTWP
         LCT C WIVGEK LCL+N+ T KYDICYTWP
Subjt:  WLCTDCFWIVGEKSLCLFNADTRKYDICYTWP

XP_022975612.1 S-protein homolog 3-like, partial [Cucurbita maxima]2.5e-3163.06Show/hide
Query:  ISLFFVNLFTV--EGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--T
        +SLFF  LFT   E  +  P +TVNITN LES NQLTVHCKSGDDDLGIHQLP L  Y F+FRPNF+G+T FYC+FQWPG   YF+IYK  RD+  C  T
Subjt:  ISLFFVNLFTV--EGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--T

Query:  DCFWIVGEKSL
         C WIVG++ +
Subjt:  DCFWIVGEKSL

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog5.7e-4264.23Show/hide
Query:  FSTLVLSLLISLFFVNLFTVEG--FYDPPTVTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKA
        FST  LSL ISL F  +FT+EG  F  PP VTVNITNAL+   NQLT+HCKSGDDDLG+HQL  L SY F+FRPNF+G+TLFYC+F W GS HYF IY+ 
Subjt:  FSTLVLSLLISLFFVNLFTVEG--FYDPPTVTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKA

Query:  KRDKWLCTD--CFWIVGEKSLCLFNADTRKYDICYTW
         RD+  C D  C WIVGE+ LC+F+  T  YDICYTW
Subjt:  KRDKWLCTD--CFWIVGEKSLCLFNADTRKYDICYTW

A0A1S3CDK4 S-protein homolog4.0e-3562.96Show/hide
Query:  VTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--TDCFWIVGEKSLCLFNADTRK
        +TVNITN +    NQLTVHCKSGDDDLG+H+LP L SY F+FRPNF+G+TLFYC FQW    HYF+IYK  RD   C  T C WI+ EK +C+FN DT+ 
Subjt:  VTVNITNALES-RNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--TDCFWIVGEKSLCLFNADTRK

Query:  YDICYTWP
        YD CY WP
Subjt:  YDICYTWP

A0A1S3CP53 S-protein homolog2.0e-3965.29Show/hide
Query:  LFTVEGF-YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD-CFWIVGEK
        LFT+EG  +  P VTVNITNAL  ++QLTVHCKSGDDDLGIHQL PL  Y F+FRPNF GTTLFYC+FQWPG  H F+IYK  RD+  C   C WIVGE+
Subjt:  LFTVEGF-YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD-CFWIVGEK

Query:  SLCLFNADTRKYDICYTWPPK
         +C+F+  T+KYD CYTW  K
Subjt:  SLCLFNADTRKYDICYTWPPK

A0A6J1CB24 S-protein homolog2.0e-4266.67Show/hide
Query:  SLLISLFFVNLFT-----VEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK
        SL++SL F+ LF+     VE        +VNITN LES  QLTVHCKS DDDLG HQLPPL SY F FRPN + +TLF+CSFQWPGSFHYFEIY  KRD+
Subjt:  SLLISLFFVNLFT-----VEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK

Query:  WLCTDCFWIVGEKSLCLFNADTRKYDICYTWP
         LCT C WIVGEK LCL+N+ T KYDICYTWP
Subjt:  WLCTDCFWIVGEKSLCLFNADTRKYDICYTWP

A0A6J1IDI1 S-protein homolog1.2e-3163.06Show/hide
Query:  ISLFFVNLFTV--EGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--T
        +SLFF  LFT   E  +  P +TVNITN LES NQLTVHCKSGDDDLGIHQLP L  Y F+FRPNF+G+T FYC+FQWPG   YF+IYK  RD+  C  T
Subjt:  ISLFFVNLFTV--EGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLC--T

Query:  DCFWIVGEKSL
         C WIVG++ +
Subjt:  DCFWIVGEKSL

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.8e-2145.37Show/hide
Query:  TVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD-----KWLCTDCFWIVGEKSLCLFNADTR
        TV I N L ++  L  HCKS DDDLG   L P  S+ FSF   FFG TL++CSF WP   H F+IYK  RD     K     C W +     C FN +T+
Subjt:  TVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD-----KWLCTDCFWIVGEKSLCLFNADTR

Query:  KYDICYTW
        ++D+CY W
Subjt:  KYDICYTW

F4JZG1 S-protein homolog 42.5e-1842.99Show/hide
Query:  VNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFF-GTTLFYCSFQWPGSFHYFEIYKAKRDKWL----CTDCFWIVGEKSLCLFNADTRK
        V ITN L   + L +HCKS DDDLG+  L P  S+ F FRP+   G TLF+C F WPG   +F IY   RD       C  C W +G+   C F+     
Subjt:  VNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFF-GTTLFYCSFQWPGSFHYFEIYKAKRDKWL----CTDCFWIVGEKSLCLFNADTRK

Query:  YDICYTW
        ++ICY W
Subjt:  YDICYTW

O23020 S-protein homolog 51.9e-1839.37Show/hide
Query:  LISLFFVNLFTVEGFYDPP---TVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCT
        ++  FF  LF       PP      V +TN L     LT+HCKS  DDLGIH +P    Y F F+PN + +TLF+CSFQW   F  F+IY A+RD+ +C 
Subjt:  LISLFFVNLFTVEGFYDPP---TVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCT

Query:  DCFWIVGEKSLCLFNADTRKYDICYTW
        DC W +     C      +    C+ W
Subjt:  DCFWIVGEKSLCLFNADTRKYDICYTW

P0DN93 S-protein homolog 291.1e-1835.11Show/hide
Query:  STLVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK
        S + + L I LF+V + +  G+       V +TN +  +  LT+ C+S DDDLG H L    ++ + FRP++F TTLF C F W  +  +F+ Y++ RD+
Subjt:  STLVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK

Query:  WLCTDCFWIVGEKSLCLFNADTRKYDICYTW
          C  C W +   S C+     +K+D CY W
Subjt:  WLCTDCFWIVGEKSLCLFNADTRKYDICYTW

Q9FMQ4 S-protein homolog 35.9e-2039.1Show/hide
Query:  LVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD---
        +V+ LLI + F  + T        +  V ITN L     L +HCKS DDDLG+  L P  S+ F FR +  GTTLFYC F WPG    F+IY   RD   
Subjt:  LVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD---

Query:  -KWLCTDCFWIVGEKSLCLFNADTRKYDICYTW
            C +C W +  +  C+F+     ++ICY W
Subjt:  -KWLCTDCFWIVGEKSLCLFNADTRKYDICYTW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.4e-1939.37Show/hide
Query:  LISLFFVNLFTVEGFYDPP---TVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCT
        ++  FF  LF       PP      V +TN L     LT+HCKS  DDLGIH +P    Y F F+PN + +TLF+CSFQW   F  F+IY A+RD+ +C 
Subjt:  LISLFFVNLFTVEGFYDPP---TVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCT

Query:  DCFWIVGEKSLCLFNADTRKYDICYTW
        DC W +     C      +    C+ W
Subjt:  DCFWIVGEKSLCLFNADTRKYDICYTW

AT3G16970.1 Plant self-incompatibility protein S1 family1.0e-1938.05Show/hide
Query:  YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK----WLCTDCFWIVGEKSLCLF
        +D P  TV I N L     L  HCKS +DDLG   +    ++ F FRP+ FG TLF+C F W    H+F+IYK  RD+    + C  C W + +   C  
Subjt:  YDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK----WLCTDCFWIVGEKSLCLF

Query:  NADTRKYDICYTW
        N ++  +D+C  W
Subjt:  NADTRKYDICYTW

AT3G17080.1 Plant self-incompatibility protein S1 family5.5e-2140Show/hide
Query:  LFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK----WLCTDC
        LFFV +  +       + +V I N L     L  HCKS +DDLG   L P  S+ F F P+ FG TLFYC F W    H F+IYK  RDK    + C  C
Subjt:  LFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDK----WLCTDC

Query:  FWIVGEKSLCLFNADTRKYDICYTW
         W + +   C F   T  +D CY+W
Subjt:  FWIVGEKSLCLFNADTRKYDICYTW

AT4G16195.1 Plant self-incompatibility protein S1 family1.3e-2245.37Show/hide
Query:  TVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD-----KWLCTDCFWIVGEKSLCLFNADTR
        TV I N L ++  L  HCKS DDDLG   L P  S+ FSF   FFG TL++CSF WP   H F+IYK  RD     K     C W +     C FN +T+
Subjt:  TVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD-----KWLCTDCFWIVGEKSLCLFNADTR

Query:  KYDICYTW
        ++D+CY W
Subjt:  KYDICYTW

AT5G12060.1 Plant self-incompatibility protein S1 family4.2e-2139.1Show/hide
Query:  LVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD---
        +V+ LLI + F  + T        +  V ITN L     L +HCKS DDDLG+  L P  S+ F FR +  GTTLFYC F WPG    F+IY   RD   
Subjt:  LVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRD---

Query:  -KWLCTDCFWIVGEKSLCLFNADTRKYDICYTW
            C +C W +  +  C+F+     ++ICY W
Subjt:  -KWLCTDCFWIVGEKSLCLFNADTRKYDICYTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGTTTATTTTCAACACTTGTATTGTCTCTGCTAATTTCGTTGTTTTTTGTTAACCTATTTACTGTTGAAGGGTTCTACGATCCGCCAACAGTTACAGTCAACAT
AACAAATGCTCTGGAAAGTCGCAATCAGCTCACTGTTCACTGCAAATCCGGCGATGACGATTTAGGAATTCACCAACTGCCACCTTTGACCAGCTACGACTTTAGTTTTC
GACCAAACTTCTTTGGTACAACGTTGTTCTATTGCAGCTTTCAGTGGCCTGGCTCGTTCCATTATTTCGAGATTTACAAGGCTAAAAGAGACAAATGGCTTTGCACAGAC
TGTTTCTGGATTGTGGGTGAAAAAAGTCTCTGTTTGTTCAATGCTGACACCCGCAAGTATGATATTTGCTATACGTGGCCACCTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGTTTATTTTCAACACTTGTATTGTCTCTGCTAATTTCGTTGTTTTTTGTTAACCTATTTACTGTTGAAGGGTTCTACGATCCGCCAACAGTTACAGTCAACAT
AACAAATGCTCTGGAAAGTCGCAATCAGCTCACTGTTCACTGCAAATCCGGCGATGACGATTTAGGAATTCACCAACTGCCACCTTTGACCAGCTACGACTTTAGTTTTC
GACCAAACTTCTTTGGTACAACGTTGTTCTATTGCAGCTTTCAGTGGCCTGGCTCGTTCCATTATTTCGAGATTTACAAGGCTAAAAGAGACAAATGGCTTTGCACAGAC
TGTTTCTGGATTGTGGGTGAAAAAAGTCTCTGTTTGTTCAATGCTGACACCCGCAAGTATGATATTTGCTATACGTGGCCACCTAAATAA
Protein sequenceShow/hide protein sequence
MGRLFSTLVLSLLISLFFVNLFTVEGFYDPPTVTVNITNALESRNQLTVHCKSGDDDLGIHQLPPLTSYDFSFRPNFFGTTLFYCSFQWPGSFHYFEIYKAKRDKWLCTD
CFWIVGEKSLCLFNADTRKYDICYTWPPK