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Tan0013149 (gene) of Snake gourd v1 genome

Gene IDTan0013149
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionZinc finger, FYVE/PHD-type
Genome locationLG10:808654..809488
RNA-Seq ExpressionTan0013149
SyntenyTan0013149
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597027.1 hypothetical protein SDJN03_10207, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3672.41Show/hide
Query:  HH----PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSS
        HH    PL  VCCLCGDVGFPANLFRCT C  RFQHSYCSNYYGET EAIE CDWCR E+R   GRRGS     A   G  + K SGQDKRERNSGGM S
Subjt:  HH----PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSS

Query:  SRPAPRRYKLLKDVMC
         R APRRYKLLKDVMC
Subjt:  SRPAPRRYKLLKDVMC

KAG7028505.1 hypothetical protein SDJN02_09686, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-3672.81Show/hide
Query:  HH--PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSR
        HH  PL  VCCLCGDVGFPANLFRCT C  RFQHSYCSNYYGE  EAIE CDWCR E+R   GRRGS     A   G  + K SGQDKRERNSGGM S R
Subjt:  HH--PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSR

Query:  PAPRRYKLLKDVMC
         APRRYKLLKDVMC
Subjt:  PAPRRYKLLKDVMC

XP_022974249.1 uncharacterized protein LOC111472884 isoform X1 [Cucurbita maxima]2.3e-3573.64Show/hide
Query:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR
        PL  VCCLCGDVGFPANLFRCT C  RFQHSYCSNYYGE+ EAIEVCDWCR E+R   GRRGS  +       A   K SGQDKRERNSGGM S R APR
Subjt:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR

Query:  RYKLLKDVMC
        RYKLLKDVMC
Subjt:  RYKLLKDVMC

XP_022974251.1 uncharacterized protein LOC111472884 isoform X2 [Cucurbita maxima]3.6e-3674.55Show/hide
Query:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR
        PL  VCCLCGDVGFPANLFRCT C  RFQHSYCSNYYGE+ EAIEVCDWCR E+R   GRRGS     A   G  + K SGQDKRERNSGGM S R APR
Subjt:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR

Query:  RYKLLKDVMC
        RYKLLKDVMC
Subjt:  RYKLLKDVMC

XP_023540879.1 uncharacterized protein LOC111801126 [Cucurbita pepo subsp. pepo]3.9e-3875Show/hide
Query:  HHPLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPA
        HHPL  VCCLCGDVGFPANLFRCT C  RFQHSYCSNYYGE  EAIEVCDWCR E+R   GRRGS     A   G  + K SGQDKRERNSGGM S R A
Subjt:  HHPLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPA

Query:  PRRYKLLKDVMC
        PRRYKLLKDVMC
Subjt:  PRRYKLLKDVMC

TrEMBL top hitse value%identityAlignment
A0A1Q3D081 Uncharacterized protein1.4e-2551.64Show/hide
Query:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRK-PVANDDGAVT------------GKGSGQDKRERN
        L  VCC+CGDVGFP  LFRC  C +RFQHSYCSNYY E  E IE+CDWC+SE+R+      S++K  V ND GA               +  G D++ +N
Subjt:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRK-PVANDDGAVT------------GKGSGQDKRERN

Query:  SGGMSSSRPAPRRYKLLKDVMC
          G+ S RP  RRYKLLKDVMC
Subjt:  SGGMSSSRPAPRRYKLLKDVMC

A0A5B6YSM7 Uncharacterized protein (Fragment)2.4e-2552.85Show/hide
Query:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRG-STRKPVANDDGAVTGKG--SGQDK-----------RER
        L  VCC+CGDVGFP  LFRC+ C++RFQHSYCSNYY E++E IE+CDWC+SE+RS   R G S++K     +  VT +   SG DK           + +
Subjt:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRG-STRKPVANDDGAVTGKG--SGQDK-----------RER

Query:  NSGGMSSSRPAPRRYKLLKDVMC
        N  G  S RP  RRYKLLKDVMC
Subjt:  NSGGMSSSRPAPRRYKLLKDVMC

A0A6J1IAU2 uncharacterized protein LOC111472884 isoform X21.8e-3674.55Show/hide
Query:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR
        PL  VCCLCGDVGFPANLFRCT C  RFQHSYCSNYYGE+ EAIEVCDWCR E+R   GRRGS     A   G  + K SGQDKRERNSGGM S R APR
Subjt:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR

Query:  RYKLLKDVMC
        RYKLLKDVMC
Subjt:  RYKLLKDVMC

A0A6J1IH20 uncharacterized protein LOC111472884 isoform X11.1e-3573.64Show/hide
Query:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR
        PL  VCCLCGDVGFPANLFRCT C  RFQHSYCSNYYGE+ EAIEVCDWCR E+R   GRRGS  +       A   K SGQDKRERNSGGM S R APR
Subjt:  PLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPR

Query:  RYKLLKDVMC
        RYKLLKDVMC
Subjt:  RYKLLKDVMC

A0A7J7I2F5 Uncharacterized protein1.4e-2552.42Show/hide
Query:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKG--SG-----QDKRE--------
        L  VCC+CGDVGFP  LFRC  C++RFQHSYCSNYY E++E IE+CDWC+SE+RS      S++K   ++D A T +   SG      D RE        
Subjt:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKG--SG-----QDKRE--------

Query:  RNSGGMSSSRPAPRRYKLLKDVMC
        +N  G  S RP+ RRYKLLKDVMC
Subjt:  RNSGGMSSSRPAPRRYKLLKDVMC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02070.1 unknown protein3.7e-2345.8Show/hide
Query:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQR--SGGGRRG--STRKPVA-----NDDGAVTGKGSGQDKRERNS---
        + RVCC+CGDVGF   LF C +C  RFQHSYCSNYYG+  E  E+CDWCRS+ R  S   R G  S++KP +     ND    +    G   +  N+   
Subjt:  LHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQR--SGGGRRG--STRKPVA-----NDDGAVTGKGSGQDKRERNS---

Query:  ----------GGMSSSRPAPRRYKLLKDVMC
                  GG++S + A RRYKLLKDVMC
Subjt:  ----------GGMSSSRPAPRRYKLLKDVMC

AT3G60520.1 unknown protein1.9e-2243.9Show/hide
Query:  RVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRS---------GGGRRGSTRKPVANDDGAV-------TGKGSGQDKRER
        RVCC+CGDVGF   LF C+ C +RFQHSYCS+YY E  + I++CDWC+ E +S         GG  + S R   ++    +       T   S     ++
Subjt:  RVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRS---------GGGRRGSTRKPVANDDGAV-------TGKGSGQDKRER

Query:  NSGGMSSSRPAPRRYKLLKDVMC
           G+ S RPA RRYKLLKDVMC
Subjt:  NSGGMSSSRPAPRRYKLLKDVMC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACTTTCCATCATCCCCTTCACCGCGTCTGTTGCTTGTGCGGCGACGTCGGCTTTCCGGCCAACCTCTTTCGATGCACCAACTGCTATGATCGCTTTCAACATTC
TTATTGCAGTAACTATTACGGGGAAACGACGGAGGCGATTGAAGTGTGCGATTGGTGCAGAAGTGAACAGAGAAGTGGCGGCGGCCGTCGTGGCTCTACAAGGAAGCCTG
TTGCTAACGATGATGGCGCCGTAACCGGGAAGGGCTCCGGCCAGGATAAAAGAGAAAGAAACTCTGGCGGAATGTCGTCGTCTCGGCCTGCTCCACGCCGGTACAAGCTT
CTCAAGGATGTTATGTGTTGA
mRNA sequenceShow/hide mRNA sequence
CTTCATCTTCATCCTCATCGTCACTGTCACCTTCACCATCACCATGGATACTTTCCATCATCCCCTTCACCGCGTCTGTTGCTTGTGCGGCGACGTCGGCTTTCCGGCCA
ACCTCTTTCGATGCACCAACTGCTATGATCGCTTTCAACATTCTTATTGCAGTAACTATTACGGGGAAACGACGGAGGCGATTGAAGTGTGCGATTGGTGCAGAAGTGAA
CAGAGAAGTGGCGGCGGCCGTCGTGGCTCTACAAGGAAGCCTGTTGCTAACGATGATGGCGCCGTAACCGGGAAGGGCTCCGGCCAGGATAAAAGAGAAAGAAACTCTGG
CGGAATGTCGTCGTCTCGGCCTGCTCCACGCCGGTACAAGCTTCTCAAGGATGTTATGTGTTGA
Protein sequenceShow/hide protein sequence
MDTFHHPLHRVCCLCGDVGFPANLFRCTNCYDRFQHSYCSNYYGETTEAIEVCDWCRSEQRSGGGRRGSTRKPVANDDGAVTGKGSGQDKRERNSGGMSSSRPAPRRYKL
LKDVMC