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Tan0013204 (gene) of Snake gourd v1 genome

Gene IDTan0013204
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein
Genome locationLG10:64474738..64476154
RNA-Seq ExpressionTan0013204
SyntenyTan0013204
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037155.1 hypothetical protein SDJN02_00777, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-3788.68Show/hide
Query:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
        M RS+SS SLQFL FLLSLSLHSLSVLAGDHSSAKD GKTKK DA +SPS GIK+LIICLGVVT IAFSVILFK+WQKKKREEQHARLLKLFEDDDELEV
Subjt:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

KGN52701.1 hypothetical protein Csa_009261 [Cucumis sativus]1.7e-3786.92Show/hide
Query:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        M  SQSSRSLQFLF +   +  HSLSVLA ++SSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVI FSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_008459655.1 PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo]3.2e-3989.72Show/hide
Query:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        M  SQSSRSLQFLF L   + LHSLSVLA D+SSAKDGGKTKKDD RRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

XP_023525282.1 uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo]6.6e-3788.68Show/hide
Query:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
        M RS+SS SLQFL FLLSLSLHSLSVLAGDHSSAKD GKTKK DA +SPS GIK+LIICLGVVT IAFSVILFK+WQKKKREEQHARLLKLFEDDDELEV
Subjt:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

XP_038890666.1 uncharacterized protein LOC120080166 [Benincasa hispida]9.2e-3989.62Show/hide
Query:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
        M  SQSSRSLQFL F+  L LHSLSVLA DHSSAKDGGK+KKDDARRSPSM IKI+IICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
Subjt:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ0 Uncharacterized protein8.4e-3886.92Show/hide
Query:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        M  SQSSRSLQFLF +   +  HSLSVLA ++SSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVI FSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A1S3CA76 uncharacterized protein LOC1034987101.5e-3989.72Show/hide
Query:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        M  SQSSRSLQFLF L   + LHSLSVLA D+SSAKDGGKTKKDD RRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A5A7TC90 Uncharacterized protein1.5e-3989.72Show/hide
Query:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        M  SQSSRSLQFLF L   + LHSLSVLA D+SSAKDGGKTKKDD RRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
Subjt:  MFRSQSSRSLQFLFLL--SLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        VELGLRD
Subjt:  VELGLRD

A0A6J1EBZ0 uncharacterized protein LOC1114326782.5e-3483.18Show/hide
Query:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDG-GKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE
        M RSQSSRSLQFL FL SLSLHSLSVLA +HSSA++G GK KK D  RS SMGIKI++ICLGVVTVIAFSVIL KIWQ+KKREEQHARLLKLFEDDDELE
Subjt:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDG-GKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELE

Query:  VELGLRD
        +ELGLRD
Subjt:  VELGLRD

A0A6J1GB46 uncharacterized protein LOC1114525611.0e-3586.79Show/hide
Query:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV
        M RS+SS SLQ L FLLSLSLHSLSVLAGDHSSAKD GKTKK DA +SPS GIK+LIICLGVVT IAF VILFK+WQKKKREEQHARLLKLFEDDDELEV
Subjt:  MFRSQSSRSLQFL-FLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEV

Query:  ELGLRD
        ELGLRD
Subjt:  ELGLRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09645.1 unknown protein7.3e-1850.53Show/hide
Query:  QFLFLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        + LF  S+ L     L+GD  +   G KT+   +  S   G K++++ +G V V  FS  L+K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  QFLFLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT1G57765.1 unknown protein1.1e-1650.54Show/hide
Query:  LFLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        L   S+ LH    ++GD +S+  G K +   +  S   G K++ I LG   V   S  L+K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  LFLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT1G57765.2 unknown protein5.2e-1651.61Show/hide
Query:  FLLSLSLHSL-SVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        FL  L L S+   ++GD +S+  G K +   +  S   G K++ I LG   V   S  L+K+WQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Subjt:  FLLSLSLHSL-SVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD

AT3G53490.1 unknown protein3.1e-0841.89Show/hide
Query:  SAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD
        S K+ G T+K++ +     GI +LI+ L +  V    ++ +K W+KKKR+++ AR LKLFED D++E ELGL +
Subjt:  SAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCCTTCTCTCTCTCTCTCTCCATTCTCTTTCAGTGTTGGCAGGTGACCATTCAAGTGCTAAAGATGGTGG
TAAAACTAAAAAGGACGATGCTCGAAGGAGTCCATCGATGGGGATCAAGATACTAATCATATGTTTAGGAGTGGTGACTGTCATTGCCTTTTCTGTGATTCTATTCAAGA
TATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAACTGTTTGAAGATGATGATGAACTCGAAGTCGAACTTGGTCTTCGGGATTGA
mRNA sequenceShow/hide mRNA sequence
AAATAAGTTAGCTGCCGTTACCGCTACACCCAACTCCCTCAAATCCCCATATAAAAAAACTTGGCGAAAAATTCCGCCATTTTCAACCTCTCCCAATTTCCTTCTGAAGA
AATTCCGACCAATTCATCGTCCTCGAAGAAGTTGCAGAGATCGGCGAAGGGATGTTTCGATCTCAAAGCTCCAGATCTCTGCAATTCCTCTTCCTTCTCTCTCTCTCTCT
CCATTCTCTTTCAGTGTTGGCAGGTGACCATTCAAGTGCTAAAGATGGTGGTAAAACTAAAAAGGACGATGCTCGAAGGAGTCCATCGATGGGGATCAAGATACTAATCA
TATGTTTAGGAGTGGTGACTGTCATTGCCTTTTCTGTGATTCTATTCAAGATATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAACTGTTTGAAGAT
GATGATGAACTCGAAGTCGAACTTGGTCTTCGGGATTGAGCTCCCTGATGCTCGTCCATCGTCCTCTATATCCGACCAGTTAAGAGGAGGTGCACATTGTGGATTCCATT
GCCTTTCGTTTAATGATGTATACAAGCTTTTAGATCTTATCCCAATTTTGTTTTTGGATAAGCTGAGCTGGTAAAATCATAGCAAATTCTTTCTTGTCAATTAGTTTTGA
ATAATGTTGTTGCTTCTTCAGTCATTCATCTGATACATGTTTATGTTCTCTGAGGTATGTCTCAAATATAAATCATTGTTTAGTGAATTGGTCATATTGGAAAATACATG
TTCTACTTTTTAGGGGATGGGAAATGGAGATTGAGAGTATGTGTTGTTCAACTAGCCATGTTCTGAAGAATGAAATTGTTTTCATTTTAGAAA
Protein sequenceShow/hide protein sequence
MFRSQSSRSLQFLFLLSLSLHSLSVLAGDHSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD