; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013271 (gene) of Snake gourd v1 genome

Gene IDTan0013271
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUbiquitin-conjugating enzyme family protein
Genome locationLG04:21282778..21283242
RNA-Seq ExpressionTan0013271
SyntenyTan0013271
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD8049402.1 unnamed protein product [Paramecium sonneborni]1.6e-3856.55Show/hide
Query:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS
        L RI KE  DL +DPPSNCSAG + D D   W+ATI+GPEGSPY+GGLF L+I+ P +YP KPPK++              +ICLD+LK  WS A TIS 
Subjt:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS

Query:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        VL+SI S+LTDPNPDDPL  EIA +Y  ++ ++E TAREWT K+A
Subjt:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

GBG80014.1 hypothetical protein CBR_g30275 [Chara braunii]1.6e-3858.74Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RI +E  D++RDPPSNCSAG V D D   W+ATI+GP  SPYEGG+F  SI+ PP+YP KPPKVS              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+L+DPNPDDPL  +IA++Y  NR Q+E TAR WT+K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

KAF1796396.1 ubiquitin-conjugating enzyme E2-16 kDa [Mucor lusitanicus]1.2e-3857.93Show/hide
Query:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS
        L RI KE  DL RDPPSNCSAG V D D   W+ATI+GP+ SPY+GGLF LSI+ P +YP KPPK++              SICLD+LK  WS A TIS 
Subjt:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS

Query:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        VL+S+CS+LTDPNPDDPL  E+A +Y  +R ++E TAREWT K+A
Subjt:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

OAD00687.1 hypothetical protein MUCCIDRAFT_30166 [Mucor lusitanicus CBS 277.49]1.2e-3857.93Show/hide
Query:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS
        L RI KE  DL RDPPSNCSAG V D D   W+ATI+GP+ SPY+GGLF LSI+ P +YP KPPK++              SICLD+LK  WS A TIS 
Subjt:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS

Query:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        VL+S+CS+LTDPNPDDPL  E+A +Y  +R ++E TAREWT K+A
Subjt:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

XP_022157782.1 ubiquitin-conjugating enzyme E2 11-like [Momordica charantia]6.9e-5873.38Show/hide
Query:  MSHRTDNRLARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNW
        MS   D R+ RILKENDDLRRDPPSNCS GI+SD DYNQWEATIIGPEG+PYE GLFKLSIYLPPEYPMKPPKV+              +ICLD+LKGNW
Subjt:  MSHRTDNRLARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNW

Query:  SAANTISSVLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFAH
        S A T+SSVL++ICSM+ DPNPDDPLEIEIARLY NNR QF+  AREWT KFAH
Subjt:  SAANTISSVLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFAH

TrEMBL top hitse value%identityAlignment
A0A162YU99 UBC core domain-containing protein5.9e-3957.93Show/hide
Query:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS
        L RI KE  DL RDPPSNCSAG V D D   W+ATI+GP+ SPY+GGLF LSI+ P +YP KPPK++              SICLD+LK  WS A TIS 
Subjt:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS

Query:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        VL+S+CS+LTDPNPDDPL  E+A +Y  +R ++E TAREWT K+A
Subjt:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

A0A1X2H4E3 Ubiquitin-conjugating enzyme/RWD-like protein7.8e-3957.93Show/hide
Query:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS
        L RI KE  DL RDPPS+CSAG V D D   W+ATI+GPE SPY+GG+F LSI+ P +YP KPPK++              SICLD+LK  WS A TIS 
Subjt:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS

Query:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        VL+S+CS+LTDPNPDDPL  E+A +Y N+R ++E TAREWT K+A
Subjt:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

A0A388LCJ7 UBC core domain-containing protein7.8e-3958.74Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RI +E  D++RDPPSNCSAG V D D   W+ATI+GP  SPYEGG+F  SI+ PP+YP KPPKVS              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+L+DPNPDDPL  +IA++Y  NR Q+E TAR WT+K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

A0A6J1DVE6 ubiquitin-conjugating enzyme E2 11-like3.4e-5873.38Show/hide
Query:  MSHRTDNRLARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNW
        MS   D R+ RILKENDDLRRDPPSNCS GI+SD DYNQWEATIIGPEG+PYE GLFKLSIYLPPEYPMKPPKV+              +ICLD+LKGNW
Subjt:  MSHRTDNRLARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNW

Query:  SAANTISSVLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFAH
        S A T+SSVL++ICSM+ DPNPDDPLEIEIARLY NNR QF+  AREWT KFAH
Subjt:  SAANTISSVLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFAH

A0BUC8 UBC core domain-containing protein7.8e-3956.55Show/hide
Query:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS
        L RI KE  DL +DPPSNCSAG + D D   W+ATI+GPEGSPY+GGLF L+I+ P +YP KPPK++              +ICLD+LK  WS A TIS 
Subjt:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS

Query:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        VL+SI S+LTDPNPDDPL  EIA +Y  ++ ++E TAREWT K+A
Subjt:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

SwissProt top hitse value%identityAlignment
P35131 Ubiquitin-conjugating enzyme E2 82.6e-3955.94Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPP++CSAG V++ D   W+ATI+GP  SPY GG+F ++I+ PP+YP KPPKV+              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

P35134 Ubiquitin-conjugating enzyme E2 111.0e-4058.74Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPPSNCSAG V++ D   W+ATI+GP  SPY GG+F +SI+ PP+YP KPPKVS              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

P35135 Ubiquitin-conjugating enzyme E2-17 kDa1.2e-3956.64Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPP++CSAG V++ D   W+ATI+GP  SPY GG+F +SI+ PP+YP KPPKV+              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

Q94F47 Ubiquitin-conjugating enzyme E2 281.5e-3955.94Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPP++CSAG V++ D   W+ATI+GP  SPY GG+F ++I+ PP+YP KPPKV+              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

Q9UVR2 Ubiquitin-conjugating enzyme E2-16 kDa3.4e-3957.93Show/hide
Query:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS
        L RI KE  DL RDPPS+CSAG V + D   W+ATI+GP  SPY GG+F L+I+ P +YP KPPKV+              SICLD+L+  WS A TIS 
Subjt:  LARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISS

Query:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        VL+SICSMLTDPNPDDPL  EIA +Y   R Q+E TAREWT K+A
Subjt:  VLISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

Arabidopsis top hitse value%identityAlignment
AT1G64230.1 ubiquitin-conjugating enzyme 281.1e-4055.94Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPP++CSAG V++ D   W+ATI+GP  SPY GG+F ++I+ PP+YP KPPKV+              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

AT1G64230.2 ubiquitin-conjugating enzyme 281.1e-4055.94Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPP++CSAG V++ D   W+ATI+GP  SPY GG+F ++I+ PP+YP KPPKV+              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

AT3G08690.1 ubiquitin-conjugating enzyme 117.4e-4258.74Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPPSNCSAG V++ D   W+ATI+GP  SPY GG+F +SI+ PP+YP KPPKVS              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

AT3G08690.2 ubiquitin-conjugating enzyme 117.4e-4258.74Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPPSNCSAG V++ D   W+ATI+GP  SPY GG+F +SI+ PP+YP KPPKVS              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA

AT5G41700.2 ubiquitin conjugating enzyme 81.8e-4055.94Show/hide
Query:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL
        RILKE  DL++DPP++CSAG V++ D   W+ATI+GP  SPY GG+F ++I+ PP+YP KPPKV+              SICLD+LK  WS A TIS VL
Subjt:  RILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVS--------------SICLDLLKGNWSAANTISSVL

Query:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA
        +SICS+LTDPNPDDPL  EIA +Y  +R ++E TAR WT K+A
Subjt:  ISICSMLTDPNPDDPLEIEIARLYTNNRLQFEMTAREWTNKFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCACCGCACCGATAATCGATTGGCTCGAATTTTGAAGGAAAATGATGATCTTCGAAGAGACCCACCTTCAAATTGTAGTGCTGGGATTGTTAGTGATATTGATTA
TAATCAGTGGGAGGCAACCATCATTGGACCAGAAGGTAGTCCTTATGAAGGAGGCTTATTTAAACTTTCCATATATCTTCCTCCAGAGTATCCGATGAAACCACCAAAAG
TTAGTAGTATTTGTCTTGATCTTCTCAAGGGAAATTGGAGCGCTGCTAATACAATATCAAGTGTATTGATTTCAATTTGCTCCATGTTGACTGACCCAAATCCAGACGAT
CCACTTGAAATAGAAATTGCAAGACTTTACACAAACAACAGGCTCCAATTTGAGATGACTGCTCGTGAATGGACTAATAAATTTGCTCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCACCGCACCGATAATCGATTGGCTCGAATTTTGAAGGAAAATGATGATCTTCGAAGAGACCCACCTTCAAATTGTAGTGCTGGGATTGTTAGTGATATTGATTA
TAATCAGTGGGAGGCAACCATCATTGGACCAGAAGGTAGTCCTTATGAAGGAGGCTTATTTAAACTTTCCATATATCTTCCTCCAGAGTATCCGATGAAACCACCAAAAG
TTAGTAGTATTTGTCTTGATCTTCTCAAGGGAAATTGGAGCGCTGCTAATACAATATCAAGTGTATTGATTTCAATTTGCTCCATGTTGACTGACCCAAATCCAGACGAT
CCACTTGAAATAGAAATTGCAAGACTTTACACAAACAACAGGCTCCAATTTGAGATGACTGCTCGTGAATGGACTAATAAATTTGCTCATTAG
Protein sequenceShow/hide protein sequence
MSHRTDNRLARILKENDDLRRDPPSNCSAGIVSDIDYNQWEATIIGPEGSPYEGGLFKLSIYLPPEYPMKPPKVSSICLDLLKGNWSAANTISSVLISICSMLTDPNPDD
PLEIEIARLYTNNRLQFEMTAREWTNKFAH