; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013280 (gene) of Snake gourd v1 genome

Gene IDTan0013280
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDynein light chain
Genome locationLG01:109951843..109952894
RNA-Seq ExpressionTan0013280
SyntenyTan0013280
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454627.1 PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo]3.2e-4580.17Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQ--
        MLEGKAI+GETDML+AMQQDAL+LA+KALDSFDVTEATDIARFIKKEFDR YG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSA  +E Q  
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQ--

Query:  -EPDSTQFADLETLKP
         +P +  F+ ++TLKP
Subjt:  -EPDSTQFADLETLKP

XP_022139644.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]1.5e-4786.61Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKAI+GETDMLQ MQQDALDLAAKALDSFDVTEATDIARFIKKEFDRI+GPGWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGSAGP++ +  
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  DSTQFADLETLK
        D  QFA LE LK
Subjt:  DSTQFADLETLK

XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]3.2e-4586.61Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P+  Q P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  DSTQFADLETLK
          T FA  ETLK
Subjt:  DSTQFADLETLK

XP_031266800.1 dynein light chain 2, cytoplasmic [Pistacia vera]3.2e-4583.04Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKA++GETDML++MQQDALDLAAKALD FDVTEAT+IARFIKKEFDR YG GWQCIVGTDFGSFVTHCFGCFIYF VGSLAILLFRGSA  +E  EP
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  DSTQFADLETLK
         + QFA LET+K
Subjt:  DSTQFADLETLK

XP_038899068.1 dynein light chain 2, cytoplasmic [Benincasa hispida]2.8e-4988.39Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKAI+GETDMLQAMQQDAL+LAAKALDSFDVTEATDIARFIKKEFD+IYG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA  EE+Q+P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  DSTQFADLETLK
          TQF+ +ETLK
Subjt:  DSTQFADLETLK

TrEMBL top hitse value%identityAlignment
A0A1S3BZU7 Dynein light chain1.5e-4580.17Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQ--
        MLEGKAI+GETDML+AMQQDAL+LA+KALDSFDVTEATDIARFIKKEFDR YG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSA  +E Q  
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQ--

Query:  -EPDSTQFADLETLKP
         +P +  F+ ++TLKP
Subjt:  -EPDSTQFADLETLKP

A0A5A7T1H5 Dynein light chain1.5e-4580.17Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQ--
        MLEGKAI+GETDML+AMQQDAL+LA+KALDSFDVTEATDIARFIKKEFDR YG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSA  +E Q  
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQ--

Query:  -EPDSTQFADLETLKP
         +P +  F+ ++TLKP
Subjt:  -EPDSTQFADLETLKP

A0A6J1CDL8 Dynein light chain7.4e-4886.61Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKAI+GETDMLQ MQQDALDLAAKALDSFDVTEATDIARFIKKEFDRI+GPGWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGSAGP++ +  
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  DSTQFADLETLK
        D  QFA LE LK
Subjt:  DSTQFADLETLK

A0A6J1FSQ1 Dynein light chain1.5e-4586.61Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P+  Q P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  DSTQFADLETLK
          T FA  ETLK
Subjt:  DSTQFADLETLK

A0A6J1J2G7 Dynein light chain7.6e-4585.71Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P+  Q P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  DSTQFADLETLK
          T  A  ETLK
Subjt:  DSTQFADLETLK

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm6.9e-1952.81Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M E KA++   DM + MQQDA+D A +AL+ F++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

O96860 Dynein light chain 2, cytoplasmic6.9e-1952.81Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM + MQQDA+D A +AL+ +++ +  DIA FIKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q22799 Dynein light chain 1, cytoplasmic1.2e-1851.69Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M++ KA++   DM   MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q24117 Dynein light chain 1, cytoplasmic1.5e-1851.69Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM + MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q3MHR3 Dynein light chain 2, cytoplasmic3.4e-1850.56Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM + MQQDA+D A +A++ +++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 111.8e-2253.19Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP
        MLEGKA+V ++DM   MQ  A+  A++ALD FDV +   IA  IKKEFD  YG GWQC+VG++FG F TH  G FIYF + +L  L+F+G++ P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP

AT3G16120.1 Dynein light chain type 1 family protein1.6e-2357.14Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA V ETDM   MQ  A+ +A+++LD FDV ++  IA  IKKEFD  YG GWQC+VGT+FG F TH  G FIYF +G+L  L+F+G+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT4G15930.1 Dynein light chain type 1 family protein1.4e-1443.53Show/hide
Query:  KAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        +A++   DM   MQ++A+++A  A + + V +  DIA  IKKEFD+ +G  W CIVG +FGS+VTH    F+YF +   A+LLF+
Subjt:  KAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

AT4G27360.1 Dynein light chain type 1 family protein2.6e-3774.26Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP
        MLEGKA++G+TDM Q M++DAL LA+KALD FDVTE T IARFIKKEFDR YG GWQCIVGT FGSFVTHC GCFI+F VGSL ILLF+GS G  E   P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEP

Query:  D
        D
Subjt:  D

AT5G20110.1 Dynein light chain type 1 family protein3.3e-1649.4Show/hide
Query:  DMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP
        DM   MQ  A   A   LDS +   +  +A  +KKEFD+ YGP W CIVG+ FGSFVTH  GCFIYF +  L +LLF+    P
Subjt:  DMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGGCAAAGCAATCGTCGGAGAGACGGATATGCTGCAGGCCATGCAGCAGGACGCTCTGGACCTTGCGGCTAAGGCTCTTGACAGTTTTGATGTCACTGAAGC
CACTGACATTGCTCGGTTCATTAAGAAGGAATTTGACAGGATATATGGGCCAGGATGGCAATGCATAGTGGGAACAGATTTTGGGTCATTTGTGACTCATTGTTTTGGAT
GTTTCATCTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTGTTTAGGGGCTCTGCTGGCCCAGAAGAAGATCAAGAACCTGACTCAACTCAATTTGCTGATTTGGAAACT
CTCAAACCATGA
mRNA sequenceShow/hide mRNA sequence
AAGGAATTGGCATGATTCTGCGAAGATCCGTTGGTGACCACAGAGAGAGGATCTGGTCTTGGGTGACCCACGAGCCTAGCACCAGCCAAAGTTTATCCTATAAGCTCTAT
ATAATTAAATCTCTGCTCCCTCCCTCCGCCGCCAGCTCCGCCGTGTGGTGATATATTAGAGACTGTGGCAACCATGTTGGAAGGCAAAGCAATCGTCGGAGAGACGGATA
TGCTGCAGGCCATGCAGCAGGACGCTCTGGACCTTGCGGCTAAGGCTCTTGACAGTTTTGATGTCACTGAAGCCACTGACATTGCTCGGTTCATTAAGAAGGAATTTGAC
AGGATATATGGGCCAGGATGGCAATGCATAGTGGGAACAGATTTTGGGTCATTTGTGACTCATTGTTTTGGATGTTTCATCTATTTTTGTGTTGGAAGCCTTGCAATTTT
GCTGTTTAGGGGCTCTGCTGGCCCAGAAGAAGATCAAGAACCTGACTCAACTCAATTTGCTGATTTGGAAACTCTCAAACCATGATCAAATCAAAATTCATCTCAACCAA
CCATACTTCTTCCTTTCTTTTTGTTTCTGCAAATTAATATATAAATCTCTCTCTCTCTCTCTCTTTTTTTTTTTTAATTTTCTGTTTCAGTAAAGTGATTATAGTTGAAG
AAGGAAACTTATATTTTTTTACTGCTTTGTTTACCTTTTTCTTTCTTCACAAAAAGCTAAGTCTCTTTTTTGGTGAGACATTTGGATATATGGG
Protein sequenceShow/hide protein sequence
MLEGKAIVGETDMLQAMQQDALDLAAKALDSFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEEDQEPDSTQFADLET
LKP