; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013309 (gene) of Snake gourd v1 genome

Gene IDTan0013309
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG01:113950609..113951090
RNA-Seq ExpressionTan0013309
SyntenyTan0013309
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2877.01Show/hide
Query:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKY
        M  KSK Y  RPKLSREQLSVIFRNHD DGDGRLS TELT AFRY+GA LPSYRA  ALLH DSD DGFI E++F+ LVNY EKRKY
Subjt:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKY

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2874.44Show/hide
Query:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV
        M  K+K    RPKLSREQLSVIFRNHD DGDGRLSATELTEAFRY+GA LPSYRA  AL + DSDRDGFI E++F+SLVNY EKR Y +V
Subjt:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV

KAG6608482.1 Polcalcin Syr v 3, partial [Cucurbita argyrosperma subsp. sororia]2.4e-2875.28Show/hide
Query:  EGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV
        E KSK   KR KLSREQLSVIFRNHD DGDGRLS +ELTEAFRY+G+ +PSYRA KAL HADS+ DGFI+EEEF+ L+NY EKRKY VV
Subjt:  EGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-2975.56Show/hide
Query:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV
        M  KSK Y  RPKLSREQLSVIFRNHD DGDGRLS TELT AFRY+GA LPSYRA  ALLH DSD DGFI E++F+ LVNY EKRKY V+
Subjt:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]1.1e-2872.22Show/hide
Query:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV
        M  KSK Y+ R KLSREQL +IFRNHD D DGRLS TELTEAFRY+GA LP+YRAR ALLHADSDRDGFI E++F+SLVNY E+R+Y ++
Subjt:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein5.3e-2972.22Show/hide
Query:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV
        M  KSK Y+ R KLSREQL +IFRNHD D DGRLS TELTEAFRY+GA LP+YRAR ALLHADSDRDGFI E++F+SLVNY E+R+Y ++
Subjt:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV

A0A0A0LRC1 Uncharacterized protein6.2e-1454.05Show/hide
Query:  RPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEK
        R +LSRE +  IFR HD DGDGRLS  E+ +AF   G++LP Y+A   + HAD + DGFI EEE D LV+Y +K
Subjt:  RPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEK

A0A5A7UYC0 Putative calcium-binding protein CML102.1e-1454.17Show/hide
Query:  KLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEK
        +LSRE +  IFR HD DGDGRLS +E+ +AF + G++LP Y+A   + HAD + DG+I EEE D LV+Y EK
Subjt:  KLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEK

A0A5A7VDB9 Putative calcium-binding protein CML272.0e-2871.11Show/hide
Query:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV
        M  +SK YH R +LSREQL +IFRNHD D DGRLS TELTEAFRY+GA LP YRAR AL HADSDRDGFISE++F+ LVNY E+R+Y V+
Subjt:  MEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV

A0A6A3B971 BRI1 kinase inhibitor 19.6e-1556.58Show/hide
Query:  LSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHV
        L+ EQL  +F+ HD DGDGRLS  EL +AFR +G+  PS+R R++L HAD DRDG I+ EE D LV YV K+ Y V
Subjt:  LSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHV

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML187.1e-0743.1Show/hide
Query:  QLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEF
        +L  +FR +D +GDG++SA EL    R +GA L     R+ +   DSDRDGF+   EF
Subjt:  QLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEF

Q39419 Polcalcin Bet v 43.5e-0640.3Show/hide
Query:  HKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEF
        H + K  RE+   IF+  D +GDG++SA EL EA + +G++ P    +  +   D+D DGFIS +EF
Subjt:  HKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEF

Q6L4D4 Probable calcium-binding protein CML157.1e-0738.24Show/hide
Query:  RPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL
        RP  + ++   +FR  D +GDGR+S  EL   FR VG  +      + +  ADSD DG+IS  EF ++
Subjt:  RPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL

Q8L3R2 Probable calcium-binding protein CML415.4e-0733.71Show/hide
Query:  DSIETVNSAEMEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLV
        +S  T+NS           K  + S+E+L  +F + D DGDG++SA EL   F  VG  +    A++A+   D+D DG +  E+F  L+
Subjt:  DSIETVNSAEMEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLV

Q8RZB5 Probable calcium-binding protein CML101.0e-0538.71Show/hide
Query:  EQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL
        E++  +FR  D +GDGR+S +EL   F  +G         + +  AD+D DGFIS +EF +L
Subjt:  EQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein2.1e-0635.48Show/hide
Query:  EQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL
        E+L  +F   D +GDG++S  EL   F+ +G         + L   D+DRDG+I+ +EF +L
Subjt:  EQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL

AT1G18210.2 Calcium-binding EF-hand family protein2.1e-0635.48Show/hide
Query:  EQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL
        E+L  +F   D +GDG++S  EL   F+ +G         + L   D+DRDG+I+ +EF +L
Subjt:  EQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL

AT1G73630.1 EF hand calcium-binding protein family1.1e-0534.43Show/hide
Query:  QLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL
        +L  +F   D +GDG++S +EL   F+ +G         + L   D D DGFI++EEF ++
Subjt:  QLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSL

AT3G50770.1 calmodulin-like 413.9e-0833.71Show/hide
Query:  DSIETVNSAEMEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLV
        +S  T+NS           K  + S+E+L  +F + D DGDG++SA EL   F  VG  +    A++A+   D+D DG +  E+F  L+
Subjt:  DSIETVNSAEMEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLV

AT4G12860.1 EF hand calcium-binding protein family1.1e-0530.14Show/hide
Query:  LSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRK
        + R +LS +F+  D +GDG+++  EL + F+ VG ++P     + +   D + DG +  +EF SL   + + K
Subjt:  LSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCGATCGAAACTGTGAATTCGGCGGAGATGGAAGGGAAAAGCAAAGCGTACCACAAGAGGCCGAAGCTATCAAGAGAGCAACTAAGCGTAATATTCAGAAACCA
CGACTGCGACGGCGACGGCCGCCTGAGCGCCACCGAACTCACCGAAGCCTTCCGGTATGTCGGCGCCCTACTGCCGTCGTACAGAGCTCGTAAGGCTCTTCTTCACGCCG
ATTCCGACAGAGACGGATTCATCAGCGAGGAGGAATTCGACTCGCTCGTCAATTATGTCGAGAAACGTAAATACCACGTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAATGGATTCGATCGAAACTGTGAATTCGGCGGAGATGGAAGGGAAAAGCAAAGCGTACCACAAGAGGCCGAAGCTATCAAGAGAGCAACTAAGCGTAATATTCAGA
AACCACGACTGCGACGGCGACGGCCGCCTGAGCGCCACCGAACTCACCGAAGCCTTCCGGTATGTCGGCGCCCTACTGCCGTCGTACAGAGCTCGTAAGGCTCTTCTTCA
CGCCGATTCCGACAGAGACGGATTCATCAGCGAGGAGGAATTCGACTCGCTCGTCAATTATGTCGAGAAACGTAAATACCACGTCGTTTGAACTTTTATTTTTCTCTTTT
TATTTGTTCCTCTTTCTTTTCTATCGTTTAAAGATCGTGTGTATGATGTCGATACGAGCATTGTTACTCAGTAACACATCAATCACCCTTTGAAAGATCGATAATTCAAT
CTCCTATACTGTAATAGTTGAACCCAAAAAGATTGCATCAAC
Protein sequenceShow/hide protein sequence
MDSIETVNSAEMEGKSKAYHKRPKLSREQLSVIFRNHDCDGDGRLSATELTEAFRYVGALLPSYRARKALLHADSDRDGFISEEEFDSLVNYVEKRKYHVV