; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013326 (gene) of Snake gourd v1 genome

Gene IDTan0013326
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat
Genome locationLG09:989377..990579
RNA-Seq ExpressionTan0013326
SyntenyTan0013326
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588516.1 Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.7e-11274.92Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY
        MANR+ RALVV CTTI SS SSF PN S L HHF    P I +     ++LF   SSS+A+KINTKVNFSIS     ++DD +VG    V K+ NLPPPY
Subjt:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY

Query:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN
        DPFSK    EE EDPKNLQEIFHKMRT+G LNNAVKMFD +SKDGLTHEALQLFS+IKD+GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV PN
Subjt:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        AYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTA+FEAL RD K+ EARELLVQ+EAKGFVPNEKDVK++LH KR RGPL RTLIN+LFNK
Subjt:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

KAG6588578.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]6.5e-11676.22Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHF------PTTQPPILFH------KLF---SSSKASKINTKVNFSIS-----DDDDHQVG-----VAK
        MANRV RAL+V CTTI SS SSFFPN S L HHF      PT++PP +F+      +LF   SSS+A+KINTKVNFSIS     ++DD +VG     V K
Subjt:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHF------PTTQPPILFH------KLF---SSSKASKINTKVNFSIS-----DDDDHQVG-----VAK

Query:  SNNLPPPYDPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRM
        S NLPPPYDPFSK    EE EDPKNLQEIFHKMRT+G LNNAVKMFD LSKDGLTHEALQLFSQIKD+GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRM
Subjt:  SNNLPPPYDPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRM

Query:  LASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTL
        LASGV PNAYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTAVFEAL RDTK+ EARELLVQ+EAKGFVPNEKDVK++LH KR RGPLFRTL
Subjt:  LASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTL

Query:  INVLFNK
        IN+LFNK
Subjt:  INVLFNK

XP_022931685.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]6.3e-11174.58Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSI-----SDDDDHQVG----VAKSNNLPPPY
        MANR+ RAL+V CTTI SS SSF PN S L HHF    P I +     ++LF   SSS+A+KINTKVNFSI      ++DD +VG    V K+ NLPPPY
Subjt:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSI-----SDDDDHQVG----VAKSNNLPPPY

Query:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN
        DPFSK    EE EDPKNLQEIFHKMRT+G LNNAVKMFD +SKDGLTHEALQLFS+IKD+GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV P 
Subjt:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        AYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTAVFEAL RD K+ EARELLVQ+EAKGFVPNEKDVK++LH KR RGPLFRTLIN+LFNK
Subjt:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

XP_022969848.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]6.9e-11074.25Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY
        MANR+ RAL+V CTTI SS SSF PN S L HHF      I +     ++LF   SSS+A+KINTKVNFSIS     ++DD +VG    V K+ NLPPPY
Subjt:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY

Query:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN
        DPFSK    EE EDPKNLQEIFHKMRT+G LNNA KMFD +SKDGLTHEALQLFS+IKD+GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV PN
Subjt:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        AYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTAVFEAL RD K+ EARELLVQ+EAKGFV NEKDVK++LH KR RGPLFRTLIN+LFNK
Subjt:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

XP_023530438.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita pepo subsp. pepo]2.4e-11074.25Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY
        MANR+ RAL+V CTTI SS SSF PN S L HHF    P I +     ++LF   SSS+A+KINTKVNFSIS     +++D +VG    V K+ NLPPPY
Subjt:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY

Query:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN
        DPFSK    EE  DPKNLQEIFHKMRT+G LNNAVKMFD +SKDGLTHEALQLFS+IKD+GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV PN
Subjt:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        AYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTAVFEAL RD K+ EAR LLVQ+EAKGFVPNEKDVK++LH KR RGPLFRTLIN+LFNK
Subjt:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

TrEMBL top hitse value%identityAlignment
A0A6J1DUN8 pentatricopeptide repeat-containing protein At4g38150-like1.2e-10270.16Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPN------LSLLKHHF------PTTQ--PPILFH------KLF--SSSKASKINTKVNFSIS-------DDDD--H
        MAN V RAL+V   TITSS+ SFFPN       S L  +F      PT +  PP +FH      +L+  SSS+A+KINTKVNFSIS       DDDD  H
Subjt:  MANRVIRALVVGCTTITSSNSSFFPN------LSLLKHHF------PTTQ--PPILFH------KLF--SSSKASKINTKVNFSIS-------DDDD--H

Query:  QVGVAK--SNNLPPPYDPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKE
        QVG  +   + LPPPYDPFSK    EEPEDPKNLQEIFHKMRT+GL N+AVKMFDALSKDG THEALQLFS IK++GHMPDVVAHTAVIEAYVNAGQ KE
Subjt:  QVGVAK--SNNLPPPYDPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKE

Query:  AHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRE
        AHKVYLRMLASGV PNAYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTAVFEALAR++++ EARE + Q+EAKGFV NEKDVK+VL+AKR 
Subjt:  AHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRE

Query:  RGPLFRTLINVLFNK
        RGPLFRTLIN+LFNK
Subjt:  RGPLFRTLINVLFNK

A0A6J1F064 pentatricopeptide repeat-containing protein At4g38150-like3.0e-11174.58Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSI-----SDDDDHQVG----VAKSNNLPPPY
        MANR+ RAL+V CTTI SS SSF PN S L HHF    P I +     ++LF   SSS+A+KINTKVNFSI      ++DD +VG    V K+ NLPPPY
Subjt:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSI-----SDDDDHQVG----VAKSNNLPPPY

Query:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN
        DPFSK    EE EDPKNLQEIFHKMRT+G LNNAVKMFD +SKDGLTHEALQLFS+IKD+GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV P 
Subjt:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        AYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTAVFEAL RD K+ EARELLVQ+EAKGFVPNEKDVK++LH KR RGPLFRTLIN+LFNK
Subjt:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

A0A6J1I251 pentatricopeptide repeat-containing protein At4g38150-like3.4e-11074.25Show/hide
Query:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY
        MANR+ RAL+V CTTI SS SSF PN S L HHF      I +     ++LF   SSS+A+KINTKVNFSIS     ++DD +VG    V K+ NLPPPY
Subjt:  MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILF-----HKLF---SSSKASKINTKVNFSIS-----DDDDHQVG----VAKSNNLPPPY

Query:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN
        DPFSK    EE EDPKNLQEIFHKMRT+G LNNA KMFD +SKDGLTHEALQLFS+IKD+GHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGV PN
Subjt:  DPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPN

Query:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        AYTYTVLIKGLAA PK V  AK  LLEM+GRGLRPNAGTYTAVFEAL RD K+ EARELLVQ+EAKGFV NEKDVK++LH KR RGPLFRTLIN+LFNK
Subjt:  AYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

A0A6P3YRG9 pentatricopeptide repeat-containing protein At4g38150-like4.9e-8562.02Show/hide
Query:  CTTITSSNSSF-------FPNLSLLKHHFPTTQPPILFH-KLFSSSKASKINTKVNFSI------SDDDDHQVGVAK---SNNLPPPYDPFSK----EEP
        C   +SS+SSF        P  S +K    +  PP  FH +LFSSS+ ++INTKVNFS+       DDD+++    K    + LPPPYDPF+K    EEP
Subjt:  CTTITSSNSSF-------FPNLSLLKHHFPTTQPPILFH-KLFSSSKASKINTKVNFSI------SDDDDHQVGVAK---SNNLPPPYDPFSK----EEP

Query:  EDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA
        EDPK+LQEIFH MR +GLLNNAVKMFDALSKDGLTHEAL+LF+QIKD+GHMPDVVAHTAV+EAY NAGQSKEA KV++RMLASGV PNAYTYTVLIKGLA
Subjt:  EDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA

Query:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        A PK +  AK  LLEM+G+G+RPNAG YTAVFEA A++ K+ +A + L +++AKGF P+EK VK+VL+ K  RGP+FRT++N+LF K
Subjt:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

A0A6P3ZML7 pentatricopeptide repeat-containing protein At4g38150-like4.9e-8562.02Show/hide
Query:  CTTITSSNSSF-------FPNLSLLKHHFPTTQPPILFH-KLFSSSKASKINTKVNFSI------SDDDDHQVGVAK---SNNLPPPYDPFSK----EEP
        C   +SS+SSF        P  S +K    +  PP  FH +LFSSS+ ++INTKVNFS+       DDD+++    K    + LPPPYDPF+K    EEP
Subjt:  CTTITSSNSSF-------FPNLSLLKHHFPTTQPPILFH-KLFSSSKASKINTKVNFSI------SDDDDHQVGVAK---SNNLPPPYDPFSK----EEP

Query:  EDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA
        EDPK+LQEIFH MR +GLLNNAVKMFDALSKDGLTHEAL+LF+QIKD+GHMPDVVAHTAV+EAY NAGQSK+A KV++RMLASGV PNAYTYTVLIKGLA
Subjt:  EDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA

Query:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        A PK +  AK  LLEM+G+G+RPNAG YTAVFEA A++ K+ +A + L Q++AKGF P+EK VK+VL+ K  RGP+FRT++N+LF K
Subjt:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK

SwissProt top hitse value%identityAlignment
B8Y6I0 Pentatricopeptide repeat-containing protein 10, chloroplastic2.2e-1337.88Show/hide
Query:  ALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGT
        A  +DGL  EA+  F  +K +GH P VV + A+++ +  AG   EA +V   M  +G  P+A TY  L  G  A       A   L  M  +GL PNA T
Subjt:  ALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGT

Query:  YTAVFEALARDTKLGEARELLVQLEAKGFVPN
        Y  V  A     K+ EA  L  Q++  GFVPN
Subjt:  YTAVFEALARDTKLGEARELLVQLEAKGFVPN

P0C7Q7 Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial3.7e-1329.34Show/hide
Query:  KNLQEIFHKMRTNGLLNNAVK---MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA
        K  +E+F +M ++G+L + +    + D L  +G   +AL++F  ++       +V +T +IE     G+ ++A  ++  +   GV PN  TYTV+I GL 
Subjt:  KNLQEIFHKMRTNGLLNNAVK---MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA

Query:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVL
            L + A ILL +M   G  PN  TY  +  A  RD  L  + +L+ ++++ GF  +   +K V+
Subjt:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVL

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial3.7e-1328.19Show/hide
Query:  QEIFHKMRTNGLLNNAV---KMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAP
        +E++++M T G+  + +    + D   K+   HEA Q+F  +  +G  PD+V ++ +I +Y  A +  +  +++  + + G+ PN  TY  L+ G   + 
Subjt:  QEIFHKMRTNGLLNNAV---KMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAP

Query:  KLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLE
        KL A AK L  EM+ RG+ P+  TY  + + L  + +L +A E+  +++
Subjt:  KLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLE

Q8S8P6 Pentatricopeptide repeat-containing protein At2g326302.2e-1335.04Show/hide
Query:  MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPN
        + D   K+G   EA +LF ++  +G  P+ + +  +I AY   G+ KEA K+   M A+G+ P++YTYT LI G   A   V  A  L  EM  +GL  N
Subjt:  MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPN

Query:  AGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEK
        + TYT +   L++  K  EA  L  +++ KG+  + K
Subjt:  AGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEK

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381504.1e-2833.93Show/hide
Query:  KVNFSISDD---DDHQVGVAKSNNLPPPYDPFSKEEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEA
        K + ++SDD   +  ++GV + +   P  + + +E    P++  EIF KM+  GL+ NAV M D L KDGL  EA++LF  ++D+G +P+VV +TAV+EA
Subjt:  KVNFSISDD---DDHQVGVAKSNNLPPPYDPFSKEEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEA

Query:  YVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDV
        +  A + ++A +++ +M  +G+APNA++Y VL++GL     ++  A     EM+  G  PN  T+  + +AL R   + +A+  +  L  KGF  N K V
Subjt:  YVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDV

Query:  KDVLHAKRERGPLFRTLINVLFNK
        K+ +    +R P        +F K
Subjt:  KDVLHAKRERGPLFRTLINVLFNK

Arabidopsis top hitse value%identityAlignment
AT1G12700.1 ATP binding;nucleic acid binding;helicases2.6e-1429.34Show/hide
Query:  KNLQEIFHKMRTNGLLNNAVK---MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA
        K  +E+F +M ++G+L + +    + D L  +G   +AL++F  ++       +V +T +IE     G+ ++A  ++  +   GV PN  TYTV+I GL 
Subjt:  KNLQEIFHKMRTNGLLNNAVK---MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLA

Query:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVL
            L + A ILL +M   G  PN  TY  +  A  RD  L  + +L+ ++++ GF  +   +K V+
Subjt:  AAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVL

AT2G32630.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.5e-1435.04Show/hide
Query:  MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPN
        + D   K+G   EA +LF ++  +G  P+ + +  +I AY   G+ KEA K+   M A+G+ P++YTYT LI G   A   V  A  L  EM  +GL  N
Subjt:  MFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPN

Query:  AGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEK
        + TYT +   L++  K  EA  L  +++ KG+  + K
Subjt:  AGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEK

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein2.9e-2933.93Show/hide
Query:  KVNFSISDD---DDHQVGVAKSNNLPPPYDPFSKEEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEA
        K + ++SDD   +  ++GV + +   P  + + +E    P++  EIF KM+  GL+ NAV M D L KDGL  EA++LF  ++D+G +P+VV +TAV+EA
Subjt:  KVNFSISDD---DDHQVGVAKSNNLPPPYDPFSKEEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEA

Query:  YVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDV
        +  A + ++A +++ +M  +G+APNA++Y VL++GL     ++  A     EM+  G  PN  T+  + +AL R   + +A+  +  L  KGF  N K V
Subjt:  YVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDV

Query:  KDVLHAKRERGPLFRTLINVLFNK
        K+ +    +R P        +F K
Subjt:  KDVLHAKRERGPLFRTLINVLFNK

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein2.9e-2933.93Show/hide
Query:  KVNFSISDD---DDHQVGVAKSNNLPPPYDPFSKEEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEA
        K + ++SDD   +  ++GV + +   P  + + +E    P++  EIF KM+  GL+ NAV M D L KDGL  EA++LF  ++D+G +P+VV +TAV+EA
Subjt:  KVNFSISDD---DDHQVGVAKSNNLPPPYDPFSKEEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEA

Query:  YVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDV
        +  A + ++A +++ +M  +G+APNA++Y VL++GL     ++  A     EM+  G  PN  T+  + +AL R   + +A+  +  L  KGF  N K V
Subjt:  YVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARELLVQLEAKGFVPNEKDV

Query:  KDVLHAKRERGPLFRTLINVLFNK
        K+ +    +R P        +F K
Subjt:  KDVLHAKRERGPLFRTLINVLFNK

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein5.7e-7864.32Show/hide
Query:  SSKASKINTKVNFSISDDDDHQ-------VGVAKSNNLPPPYDPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIK
        SS+  ++NTKVNFS+SDDD  +           K    PPPYDPFSK    EEPEDPKNLQEIFHKMRT G  N AVKMFDALSKDG THEAL+LFSQIK
Subjt:  SSKASKINTKVNFSISDDDDHQ-------VGVAKSNNLPPPYDPFSK----EEPEDPKNLQEIFHKMRTNGLLNNAVKMFDALSKDGLTHEALQLFSQIK

Query:  DQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARE
        D+  MPDVVAHTA++EAY NAGQ+KE  KV++RMLASGV+PNAYTY+VLIKGLAA  K    AK  LLEM+G G+ PNA TYTAVFEA  R+ K   ARE
Subjt:  DQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYTAVFEALARDTKLGEARE

Query:  LLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK
        LL +++ KGFVP+EK V++ L  K  RG +FRT+IN+LF+K
Subjt:  LLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACAGGGTAATCCGAGCTCTTGTTGTTGGCTGCACCACCATCACTTCATCTAATTCATCCTTCTTCCCCAACCTATCCTTACTAAAACATCATTTTCCAACTAC
CCAACCACCAATTCTTTTCCACAAATTATTTTCCTCCTCAAAAGCTAGCAAGATCAACACCAAAGTCAACTTCTCAATCTCAGACGACGACGACCATCAGGTTGGAGTGG
CCAAAAGCAACAATCTTCCCCCGCCTTATGACCCCTTCAGCAAGGAAGAGCCCGAAGACCCAAAAAACTTGCAGGAAATCTTCCATAAGATGAGAACAAATGGTCTTTTA
AACAATGCCGTCAAGATGTTCGACGCATTGTCTAAAGATGGCCTCACCCACGAGGCTCTCCAGCTCTTCTCTCAAATTAAGGACCAAGGTCACATGCCTGATGTTGTCGC
CCACACCGCCGTTATAGAAGCCTACGTGAATGCAGGTCAGAGCAAGGAAGCTCACAAGGTCTACCTGCGAATGCTTGCCTCTGGAGTGGCCCCAAATGCCTACACTTACA
CTGTTCTCATCAAAGGACTTGCTGCAGCTCCCAAGTTGGTCGCCCATGCCAAGATTTTATTGCTGGAAATGATCGGCAGAGGATTGCGACCCAATGCTGGGACCTATACA
GCCGTCTTTGAGGCTCTTGCAAGGGATACCAAATTGGGCGAAGCAAGAGAATTGTTGGTGCAATTGGAGGCTAAGGGGTTTGTGCCTAATGAGAAGGATGTTAAGGATGT
TCTCCATGCCAAAAGGGAAAGAGGACCCTTATTTAGAACCCTCATCAACGTTCTCTTCAACAAGTAG
mRNA sequenceShow/hide mRNA sequence
GAGTATTGGGCGAGGAAAGGGCATTTTAAAGGAACGCGGCCGCAGGCGAAACTCAAAACCCAAATATCCCGATAGGGCATGGCGAACAGGGTAATCCGAGCTCTTGTTGT
TGGCTGCACCACCATCACTTCATCTAATTCATCCTTCTTCCCCAACCTATCCTTACTAAAACATCATTTTCCAACTACCCAACCACCAATTCTTTTCCACAAATTATTTT
CCTCCTCAAAAGCTAGCAAGATCAACACCAAAGTCAACTTCTCAATCTCAGACGACGACGACCATCAGGTTGGAGTGGCCAAAAGCAACAATCTTCCCCCGCCTTATGAC
CCCTTCAGCAAGGAAGAGCCCGAAGACCCAAAAAACTTGCAGGAAATCTTCCATAAGATGAGAACAAATGGTCTTTTAAACAATGCCGTCAAGATGTTCGACGCATTGTC
TAAAGATGGCCTCACCCACGAGGCTCTCCAGCTCTTCTCTCAAATTAAGGACCAAGGTCACATGCCTGATGTTGTCGCCCACACCGCCGTTATAGAAGCCTACGTGAATG
CAGGTCAGAGCAAGGAAGCTCACAAGGTCTACCTGCGAATGCTTGCCTCTGGAGTGGCCCCAAATGCCTACACTTACACTGTTCTCATCAAAGGACTTGCTGCAGCTCCC
AAGTTGGTCGCCCATGCCAAGATTTTATTGCTGGAAATGATCGGCAGAGGATTGCGACCCAATGCTGGGACCTATACAGCCGTCTTTGAGGCTCTTGCAAGGGATACCAA
ATTGGGCGAAGCAAGAGAATTGTTGGTGCAATTGGAGGCTAAGGGGTTTGTGCCTAATGAGAAGGATGTTAAGGATGTTCTCCATGCCAAAAGGGAAAGAGGACCCTTAT
TTAGAACCCTCATCAACGTTCTCTTCAACAAGTAGACACAGCCAAATTTGGTTTAATCTCTTGTCAGGGAGAATTCTCATGCCTGGCCATGTCTATCATTATCCACTTTG
CACTTCACAGTAACTTCAGATATCTATGCAATCTATGATTATATATGGTAATGGTATTACTTCTTTTACTTCTTTTATTATTATGGTTGTTATTATTGAGCTCACAAACA
GAACAATCTTTGCCCTTTCCATGGATGAGATATTATTTTGTCGACTCATTATGGATAAACCGTGATCCTCAAACTTACTACCAATAAATTAGAGTAAATCAAG
Protein sequenceShow/hide protein sequence
MANRVIRALVVGCTTITSSNSSFFPNLSLLKHHFPTTQPPILFHKLFSSSKASKINTKVNFSISDDDDHQVGVAKSNNLPPPYDPFSKEEPEDPKNLQEIFHKMRTNGLL
NNAVKMFDALSKDGLTHEALQLFSQIKDQGHMPDVVAHTAVIEAYVNAGQSKEAHKVYLRMLASGVAPNAYTYTVLIKGLAAAPKLVAHAKILLLEMIGRGLRPNAGTYT
AVFEALARDTKLGEARELLVQLEAKGFVPNEKDVKDVLHAKRERGPLFRTLINVLFNK