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Tan0013330 (gene) of Snake gourd v1 genome

Gene IDTan0013330
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43096374..43096586
RNA-Seq ExpressionTan0013330
SyntenyTan0013330
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637268.1 hypothetical protein CSA_017684 [Cucumis sativus]3.9e-0955.71Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRG
        M+SWLIC+V ISMLV  QEV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRG

KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-0848.68Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADR------TYLKLVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG
        M+S  ICL +I+ML+T Q+V  ++       YLK ++C+ PNPP  CS    +G   V AN Y RGCSAI+RCRGG
Subjt:  MQSWLICLVIISMLVTGQEVAADR------TYLKLVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]1.1e-1159.15Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG
        M+SWLICLV+I MLV  Q+VA++  +LK  D C QPNPPP CS  N     +V AN Y RGCS I RCRGG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]4.1e-1159.15Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG
        M+SWLIC+V+ISMLV  QEVA++  +LK  D C QPNPP  CS  N     +V AN Y RGCS I RCRGG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]6.8e-1463.38Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG
        M+SWLIC+V ISMLV G  VAA++ YL+ +D CNQPNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein6.2e-1361.97Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG
        M+SWLICL +I MLV GQEVAA+  +LK +D CNQP+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein1.9e-0955.71Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRG
        M+SWLIC+V ISMLV  QEV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRG

A0A1S4DY33 protein RALF-like 301.3e-0753.52Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG
        M+SWLIC  ++SMLV G EVAA   +LK +D C QP+PP SC       S      AY RGCS I RCRGG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG

A0A6J1G7J2 protein RALF-like 105.3e-1259.15Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG
        M+SWLICLV+I MLV  Q+VA++  +LK  D C QPNPPP CS  N     +V AN Y RGCS I RCRGG
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLKLVD-CNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG

B2Y4P6 Putative rapid alkalinization factor (RALF) family protein2.5e-0643.66Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++W+ICL++IS  VT + V + R Y++   +  C  PNPPP C  P  E       N Y+RGCS I+RCR
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 121.4e-0639.44Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E       N Y+RGCS I+RCR
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

F4ISE2 Protein RALF-like 131.3e-0740.85Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E       N Y+RGCS I+RCR
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

O64466 Protein RALF-like 112.6e-0842.25Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E       N Y+RGCS I+RCR
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

O65919 Protein RALF-like 107.1e-0638.03Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++ +ICL++I   V    V + R +L    +  C  PNPPP C  P  +      AN Y RGCS I RC+
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 251.2e-0546.97Show/hide
Query:  LICLVIISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        +I LVI S+L+ G+  A D  R YL L  C +PN PP C     +  T V  N Y+RGC+ INRCR
Subjt:  LICLVIISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 105.1e-0738.03Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++ +ICL++I   V    V + R +L    +  C  PNPPP C  P  +      AN Y RGCS I RC+
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

AT2G19030.1 ralf-like 111.9e-0942.25Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++WLICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E       N Y+RGCS I+RCR
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

AT2G19040.1 RALF-like 121.0e-0739.44Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++W+I L++I  +V  + V + R Y++   +  C  PNPPP C+ P  E       N Y+RGCS I+RCR
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

AT2G19045.1 RALF-like 139.2e-0940.85Show/hide
Query:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        M++W+ICL++I   V  + V + R Y++   +  C  PNPPP C+ P  E       N Y+RGCS I+RCR
Subjt:  MQSWLICLVIISMLVTGQEVAADRTYLK---LVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR

AT3G25165.1 ralf-like 258.6e-0746.97Show/hide
Query:  LICLVIISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR
        +I LVI S+L+ G+  A D  R YL L  C +PN PP C     +  T V  N Y+RGC+ INRCR
Subjt:  LICLVIISMLVTGQEVAAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCATGGCTCATTTGTTTAGTTATTATTAGCATGTTGGTGACAGGACAAGAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAACCC
ACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACATCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCATGGCTCATTTGTTTAGTTATTATTAGCATGTTGGTGACAGGACAAGAAGTAGCAGCGGACAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAACCC
ACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACATCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MQSWLICLVIISMLVTGQEVAADRTYLKLVDCNQPNPPPSCSSPNGEGSTSVSANAYTRGCSAINRCRGG