; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013339 (gene) of Snake gourd v1 genome

Gene IDTan0013339
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG03:64177100..64179882
RNA-Seq ExpressionTan0013339
SyntenyTan0013339
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147887.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus]2.3e-15394.7Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRLA++ PSSGRVQARF FGKKKSP KKSPSS+ ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS

XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]2.3e-15394.7Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSS+ ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS

XP_022931964.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]9.5e-15594.76Show/hide
Query:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAAT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKK PSS+QI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        VAGD+IGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        QRNAEL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS

XP_022966541.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]1.9e-15595.1Show/hide
Query:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAAT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKKSPSS+QI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        VAGD+IGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        QRNAEL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]2.3e-15394.7Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++RP SGRVQARF FGKKKSP KKSPSS+ ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKK +LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXI3 Chlorophyll a-b binding protein, chloroplastic1.1e-15394.7Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRLA++ PSSGRVQARF FGKKKSP KKSPSS+ ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS

A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic1.1e-15394.7Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSS+ ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic1.1e-15394.7Show/hide
Query:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSS+ ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE++EVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS

A0A6J1EVQ5 Chlorophyll a-b binding protein, chloroplastic4.6e-15594.76Show/hide
Query:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAAT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKK PSS+QI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        VAGD+IGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        QRNAEL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS

A0A6J1HPL7 Chlorophyll a-b binding protein, chloroplastic9.3e-15695.1Show/hide
Query:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        MAAT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKKSPSS+QI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
Subjt:  MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        VAGD+IGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTG+TWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        QRNAEL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic9.9e-3837.86Show/hide
Query:  ATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDI
        A++S +   +A V PS     ++  F     P   + +  +I     W PG   P +LDGS  GD+GFDP GLG+ PA                      
Subjt:  ATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDI

Query:  IGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQR
                               L+R++E ELIH RWAMLA  G L  E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR
Subjt:  IGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID
        + E DPEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF+GF VQ +A  G GPL N ATHL+DP H  I D
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic4.2e-13783.22Show/hide
Query:  AATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        +A AAA SS +GTR+A  + P SGR  A F FGKKK+  KKS      +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN
Subjt:  AATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        +AGD+IGTR E ++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        QRNAELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS

Q93WD2 Chlorophyll a-b binding protein CP291.5e-6557.96Show/hide
Query:  RQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIG-TRFENSEVKS-TPFQPYTEVFGLQRFRECELIHGRWA
        R+     LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +    +    EV S     PY+EVFGL RFRECELIHGRWA
Subjt:  RQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIG-TRFENSEVKS-TPFQPYTEVFGLQRFRECELIHGRWA

Query:  MLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAI-LQLAEIKHA
        MLA LGAL  E  TG++W +AGKVEL +G+SY G  LPFSIT LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA + E++A  L+ AEIKHA
Subjt:  MLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAI-LQLAEIKHA

Query:  RLAMVAFLGFAVQAAATGKGPLNNWA
        RLAMV+F G+ VQA +TG+G L + A
Subjt:  RLAMVAFLGFAVQAAATGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic3.8e-11477.04Show/hide
Query:  TAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTGI WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        FQRN+ELDPEKR+YPGG YFDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic4.3e-13482.81Show/hide
Query:  ATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
         G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        RNAELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II2.7e-11577.04Show/hide
Query:  TAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTGI WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        FQRN+ELDPEKR+YPGG YFDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II6.1e-6773.96Show/hide
Query:  TAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVE
        NVAGDIIG   E+SE+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTGI WQDAGKVE
Subjt:  NVAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II1.7e-6971.82Show/hide
Query:  ATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPF
         G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTG+TWQDAGKV  +  SS L   L F
Subjt:  AGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II3.1e-13582.81Show/hide
Query:  ATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ
         G++IGTR E  + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        RNAELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS

AT5G01530.1 light harvesting complex photosystem II3.0e-13883.22Show/hide
Query:  AATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        +A AAA SS +GTR+A  + P SGR  A F FGKKK+  KKS      +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN
Subjt:  AATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        +AGD+IGTR E ++ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTG+TWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
        QRNAELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS
Subjt:  QRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGACGTGCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAAAG
TCCGGCGAAGAAATCGCCGTCGTCGAGGCAGATTTCCGACCGGCCGCTGTGGTTCCCGGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGCGACTACGGGT
TCGATCCGTTCGGGTTGGGGAAACCGGCAGAGTATTTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTT
GAGAACTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGGTGGGCCATGTTGGCTAC
ACTTGGCGCTCTCTCTGTTGAATGGCTCACTGGCATCACTTGGCAAGACGCTGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCGTTCTCCA
TCACGACATTGATCTGGATCGAAGTTCTGGTGATCGGATACATCGAGTTTCAGAGGAACGCCGAGCTCGACCCGGAGAAGAGATTGTACCCCGGGGGCAAGTATTTTGAC
CCCTTGGGCTTGGCCGAGGATCCCGAGAAGAAAGCTATTTTACAATTGGCTGAGATCAAGCATGCTCGCCTCGCCATGGTTGCCTTCCTTGGCTTTGCTGTTCAAGCTGC
TGCCACTGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTCAGTGACCCGCTCCATACCACTATTATTGACACCTTCTCTTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CACCGTTCCAGTACAACGGGATAAGGCAGAGATAAGGCCTAAACGCACAACTGCCGTCAGATGGATTCGTCTCACAATCCAACGGACAGAAAACCACAGCCACAGATTAT
GTGGCAATCGCCGATCACAATTCCCATTTCTGAACCACATAATAACCCAACCAAAATCCCTAATTCCATCTCACACTCCTCATTTCCCCTCTCTCAACTCGCCGCGAAAA
TATCGCCGTCGTAATGGCCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGCCGACGTGCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCG
GCAAAAAGAAAAGTCCGGCGAAGAAATCGCCGTCGTCGAGGCAGATTTCCGACCGGCCGCTGTGGTTCCCGGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTC
GGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCAGAGTATTTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAAT
CGGAACGAGATTTGAGAACTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGGTGGG
CCATGTTGGCTACACTTGGCGCTCTCTCTGTTGAATGGCTCACTGGCATCACTTGGCAAGACGCTGGAAAAGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCC
CTTCCGTTCTCCATCACGACATTGATCTGGATCGAAGTTCTGGTGATCGGATACATCGAGTTTCAGAGGAACGCCGAGCTCGACCCGGAGAAGAGATTGTACCCCGGGGG
CAAGTATTTTGACCCCTTGGGCTTGGCCGAGGATCCCGAGAAGAAAGCTATTTTACAATTGGCTGAGATCAAGCATGCTCGCCTCGCCATGGTTGCCTTCCTTGGCTTTG
CTGTTCAAGCTGCTGCCACTGGCAAAGGCCCGCTCAATAACTGGGCAACCCATCTCAGTGACCCGCTCCATACCACTATTATTGACACCTTCTCTTCTTCTTAAGCTCCT
CTTCGAGTTTACGTGTTCACGTCATCTCTAGTTTGTAAAAACTTGACCGAGTCATGTGATGAGCTGTAAGTACTTTGATTCGAAATTCCGTATGTGAAATTATATATTAA
TTACGTCTACGAGAGCTACTCAACTATGGACATAAAATATGTGGTTTATGATCATAAGAGGTCATGGGTTTGAATTCTACTACTTAAAAAAATTAAAAAAGAATTAATAG
TGAGAAAAAAGTGTTATTAATTTATTTTTTTAACTATATATACAAATGTATATTTTCAAAACTTCCCAAACTACTTAAAAAGTGTGCATTTAAAATTTGTTTAACATGCT
TATTTAAATACTTATTCAATGATAGGTTAGTGATTGGGTGAACTTTGGG
Protein sequenceShow/hide protein sequence
MAATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSRQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRF
ENSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFD
PLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS