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Tan0013347 (gene) of Snake gourd v1 genome

Gene IDTan0013347
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationLG09:71518248..71518621
RNA-Seq ExpressionTan0013347
SyntenyTan0013347
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]4.1e-3078.26Show/hide
Query:  LLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKWVAFKSPIINTHKADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        +LS KAL+F  +LA  SLC+QPQTAS L++IDLALKWVAFKSPI NTH  DSVK L MK M+LAPSPAM+FDPNQSNKRGVKKGSDPIHNRS
Subjt:  LLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKWVAFKSPIINTHKADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2878.35Show/hide
Query:  MGFLLSRKALIFVFVLA--VFSLCLQPQTASSLSSIDLALKWVAFKSPIINTHKA-DSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFL  RK L F+F+LA  VFSL LQPQTAS L++ID+ALKWVAFKSP I+THKA DS K LNMK MN+APSPAMNFDPNQSNKR VKKGSDPIHNR
Subjt:  MGFLLSRKALIFVFVLA--VFSLCLQPQTASSLSSIDLALKWVAFKSPIINTHKA-DSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]3.8e-2372.55Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCL---QPQ-TASSLSSIDLALKWVAFKSP-IINTHKADS--VKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHN
        MG L SRK L FVFV+A F LC+   QPQ TA+ LS+ID ALKWVAFKS   INTHKADS   KNLN+     APSPAMNFDPNQSNKRGVKKGSDPIHN
Subjt:  MGFLLSRKALIFVFVLAVFSLCL---QPQ-TASSLSSIDLALKWVAFKSP-IINTHKADS--VKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHN

Query:  RS
        RS
Subjt:  RS

PON57384.1 CLAVATA3/ESR-RELATED [Parasponia andersonii]8.7e-1251.55Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKWVAFKSPII-NTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MG L +R AL+ + +L V  L L P+  S+L S DLALKW   K P + N H  KA ++++L   K++LAP+P++ FDPNQSNKR V++GSDPIHNR
Subjt:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKWVAFKSPII-NTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

PQQ10203.1 hypothetical protein Pyn_16404 [Prunus yedoensis var. nudiflora]8.7e-1250.52Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTHKADSVKNLNMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGFL  R A++FV    +  L LQP+  S L S+DLAL+W     S + + H  ++V   +++ K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTHKADSVKNLNMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

TrEMBL top hitse value%identityAlignment
A0A0A0LPD5 Uncharacterized protein1.8e-2372.55Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCL---QPQ-TASSLSSIDLALKWVAFKSP-IINTHKADS--VKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHN
        MG L SRK L FVFV+A F LC+   QPQ TA+ LS+ID ALKWVAFKS   INTHKADS   KNLN+     APSPAMNFDPNQSNKRGVKKGSDPIHN
Subjt:  MGFLLSRKALIFVFVLAVFSLCL---QPQ-TASSLSSIDLALKWVAFKSP-IINTHKADS--VKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHN

Query:  RS
        RS
Subjt:  RS

A0A2P5C8R0 CLAVATA3/ESR-RELATED4.2e-1251.55Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKWVAFKSPII-NTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MG L +R AL+ + +L V  L L P+  S+L S DLALKW   K P + N H  KA ++++L   K++LAP+P++ FDPNQSNKR V++GSDPIHNR
Subjt:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKWVAFKSPII-NTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

A0A314XM06 Uncharacterized protein7.2e-1252.58Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFL  R A++FV    +  L LQP+  S L S+DLAL+W     S + + H  KA +V++L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

A0A314YU30 Uncharacterized protein4.2e-1250.52Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTHKADSVKNLNMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS
        MGFL  R A++FV    +  L LQP+  S L S+DLAL+W     S + + H  ++V   +++ K++LAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTHKADSVKNLNMK-KMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS

M5WYZ5 Uncharacterized protein7.2e-1252.58Show/hide
Query:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR
        MGFL  R A++FV    +  L LQP+  S L S+DLAL+W     S + + H  KA +V++L   K++LAP+P+M FDPNQSNKR V+KGSDPIHNR
Subjt:  MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKW-VAFKSPIINTH--KADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTTGCTTAGCAGGAAAGCTTTGATCTTTGTCTTTGTTCTTGCTGTTTTTTCTTTGTGTCTTCAACCTCAAACAGCATCTTCCCTCAGCTCCATTGATCTTGC
TCTCAAATGGGTCGCCTTCAAATCCCCAATCATCAACACCCACAAGGCTGATTCTGTGAAAAATTTGAATATGAAGAAGATGAACTTGGCTCCATCACCAGCTATGAATT
TTGACCCGAATCAATCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGGTCCTAG
mRNA sequenceShow/hide mRNA sequence
GAATTTTCCATCAACAAAAATTGGTCGAGTTCCTGTCTCACACATCTCAAATTGTTTTCTCTTCACATTCTTCAATACAAAACAAAATGGGTTTCTTGCTTAGCAGGAAA
GCTTTGATCTTTGTCTTTGTTCTTGCTGTTTTTTCTTTGTGTCTTCAACCTCAAACAGCATCTTCCCTCAGCTCCATTGATCTTGCTCTCAAATGGGTCGCCTTCAAATC
CCCAATCATCAACACCCACAAGGCTGATTCTGTGAAAAATTTGAATATGAAGAAGATGAACTTGGCTCCATCACCAGCTATGAATTTTGACCCGAATCAATCCAACAAAA
GAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGGTCCTAG
Protein sequenceShow/hide protein sequence
MGFLLSRKALIFVFVLAVFSLCLQPQTASSLSSIDLALKWVAFKSPIINTHKADSVKNLNMKKMNLAPSPAMNFDPNQSNKRGVKKGSDPIHNRS