; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013348 (gene) of Snake gourd v1 genome

Gene IDTan0013348
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionflowering-promoting factor 1-like
Genome locationLG02:94844476..94845153
RNA-Seq ExpressionTan0013348
SyntenyTan0013348
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652180.1 hypothetical protein Csa_021977 [Cucumis sativus]2.8e-5495.5Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

XP_004138764.1 flowering-promoting factor 1 [Cucumis sativus]4.8e-5495.5Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

XP_022132061.1 flowering-promoting factor 1-like [Momordica charantia]3.0e-5696.36Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILT+LGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

XP_022950996.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]4.3e-5597.27Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

XP_023546289.1 flowering-promoting factor 1-like [Cucurbita pepo subsp. pepo]3.1e-5392.73Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYS L+EILTSLGWERYYGGDP+LFQFHKRSSIDLISLP+D+AKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

TrEMBL top hitse value%identityAlignment
A0A0A0LPY7 Uncharacterized protein2.3e-5495.5Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

A0A5A7VCS2 Flowering-promoting factor 12.3e-5495.5Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRR-KVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDV
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDV

A0A6J1BR67 flowering-promoting factor 1-like1.4e-5696.36Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILT+LGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNS+HMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRD+
Subjt:  NPNLFHVRDV

A0A6J1GGC5 flowering-promoting factor 1-like protein 22.1e-5597.27Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

A0A6J1KTX8 flowering-promoting factor 1-like protein 22.1e-5597.27Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLI+LPTGQ VSSYSSLEEILTSLGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRDV
        NPNLFHVRDV
Subjt:  NPNLFHVRDV

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 11.5e-4275.68Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV
        MSGVWVFKNGVIRL+ENP Q+ SD +   +RRKV+++LPTG+ VSSYS+LE+IL SLGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD

O24340 Flowering-promoting factor 13.3e-4273.64Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRL+ENP  +  G   NSRRKV+++LPTG+ +SSYS+LE+IL SLGWERY+ GGD DL QFHKRSSIDLISLP+DF KF+S++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 17.7e-3965.32Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+L+HLP+ + VSSY SLE+IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDV
        +KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDV

Q9LGE3 Flowering-promoting factor 1-like protein 11.4e-3564.22Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK
        MSGVWVFKNGV+RL+E  QA +   +   RRK L+H P+GQ VSSY++LE  LT+LGWERYY  DP LFQFHKR S+DLISLP DF+ F+S+HMYDIV+K
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIK

Query:  NPNLFHVRD
        N + F V D
Subjt:  NPNLFHVRD

Q9LXB5 Flowering-promoting factor 1-like protein 23.3e-4272.73Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VL++LPTG+ VSSYSSLE+IL SLGWERY+ GD DL Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 15.5e-4065.32Show/hide
Query:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP   S G    S           RRK+L+HLP+ + VSSY SLE+IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENPQADSDGRLGNS-----------RRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGD--PDLFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDV
        +KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDV

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)2.4e-4372.73Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP Q+       + RR VL++LPTG+ VSSYSSLE+IL SLGWERY+ GD DL Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

AT5G24860.1 flowering promoting factor 11.1e-4375.68Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV
        MSGVWVFKNGVIRL+ENP Q+ SD +   +RRKV+++LPTG+ VSSYS+LE+IL SLGWERY+ GGD DL QFHKRSSIDLISLPRDF KFNS++MYDIV
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYY-GGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGGGTTTGGGTTTTCAAGAATGGTGTAATTCGCTTGATCGAAAATCCTCAAGCAGATTCTGATGGAAGACTAGGCAACTCCAGGCGAAAGGTATTGATACACCT
CCCGACGGGCCAGCCTGTGTCATCCTACTCCTCGCTAGAGGAAATCCTCACATCATTGGGATGGGAGAGATACTATGGAGGCGATCCAGACCTGTTCCAGTTTCATAAAC
GCTCCTCCATTGACCTAATTTCTCTCCCCAGGGACTTCGCCAAGTTCAACTCCATTCACATGTACGACATAGTCATTAAAAACCCCAATCTCTTCCACGTCCGAGATGTG
TGA
mRNA sequenceShow/hide mRNA sequence
CTCCAACTTGTCCTTATACCCACTTATTTCCAAAGATACAACCAGGTTTTTTCACCAAAATTAAACAAGGGCATAAGTATACTAAGAAACATGTCTGGGGTTTGGGTTTT
CAAGAATGGTGTAATTCGCTTGATCGAAAATCCTCAAGCAGATTCTGATGGAAGACTAGGCAACTCCAGGCGAAAGGTATTGATACACCTCCCGACGGGCCAGCCTGTGT
CATCCTACTCCTCGCTAGAGGAAATCCTCACATCATTGGGATGGGAGAGATACTATGGAGGCGATCCAGACCTGTTCCAGTTTCATAAACGCTCCTCCATTGACCTAATT
TCTCTCCCCAGGGACTTCGCCAAGTTCAACTCCATTCACATGTACGACATAGTCATTAAAAACCCCAATCTCTTCCACGTCCGAGATGTGTGAGTTTGACAGCTTCATGT
GTTTTTCCATCTCTCGATCATGTCATATATTATATAATCCCCCATGCATGTGTCATTAATTCAAGTGTTTGTCGTGCATTTTTATCATCTATTTCTTTGGTCCTTGAATC
TTGTAAGAAATGGTTGTTCCACTGCCTAGTTAGGTTTCTTTTCATTCTGGTTGGTTGGCTAGCTTTCCTCCGTGGTTATCTTAAATATTTGTGTAGTTCCATGTGATGTG
TGTTGTTATAGAAGTTCC
Protein sequenceShow/hide protein sequence
MSGVWVFKNGVIRLIENPQADSDGRLGNSRRKVLIHLPTGQPVSSYSSLEEILTSLGWERYYGGDPDLFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIKNPNLFHVRDV