; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013357 (gene) of Snake gourd v1 genome

Gene IDTan0013357
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein like
Genome locationLG05:76695666..76695980
RNA-Seq ExpressionTan0013357
SyntenyTan0013357
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044701.1 hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa]7.0e-2377.33Show/hide
Query:  DLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        +LS +R  NSP+S R L +LQRRR QQI NCGEKVSA QCSQ+ KCRWCRS VIDDTCF+RAEALRLPQQVFSCD
Subjt:  DLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

KAG6573331.1 hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3879.81Show/hide
Query:  MGRSSDLHTPISIFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQV
        MGRS  LHTP+SIFLVSFLF SF+CVSS+ LSE R  N P+SDR LLSLQRRR ++IPNCGEKVSALQCS++P CRWCRS  IDDTCFSRAEALRLPQQV
Subjt:  MGRSSDLHTPISIFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQV

Query:  FSCD
        FSCD
Subjt:  FSCD

OMO65460.1 hypothetical protein COLO4_31211 [Corchorus olitorius]1.1e-1552.13Show/hide
Query:  SIFLVSFLFLSFLC-VSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        ++F + FL LS L  +S+ D+ +  +S      R LL+LQR    QIPNCGE +S  QC Q+PKCRWCRS  +DD CF ++EA RLPQQVF CD
Subjt:  SIFLVSFLFLSFLC-VSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

PNT39842.1 hypothetical protein POPTR_004G062700 [Populus trichocarpa]2.4e-1551.61Show/hide
Query:  IFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQ-QIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        + ++SFL ++ L +S+   S N  S+S + DR+LL+ QR  A+ QIP+C E VS  QCS +P C+WC+S V+DD CFS+AEA RLPQQVF C+
Subjt:  IFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQ-QIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

XP_038723734.1 uncharacterized protein LOC120015395 [Tripterygium wilfordii]7.0e-1550.52Show/hide
Query:  IFLVSFLFLSFL--CVSSHDLSENRISNSPNSDRILLSLQRR---RAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        I L+  L  SFL    SSH ++     +S  S R +L+ QRR    ++QIP+CG+ VS   CSQ+P+CRWCRS  +DD CFS+ EA RLPQQVF+CD
Subjt:  IFLVSFLFLSFL--CVSSHDLSENRISNSPNSDRILLSLQRR---RAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

TrEMBL top hitse value%identityAlignment
A0A0A0LX55 Uncharacterized protein3.1e-3273.53Show/hide
Query:  RSSDLHTPISIFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFS
        RSS L +P+SIFL+SFLF  F  +S + LS +R  NSP+S R L SLQRRR QQI NCGEKVSALQCSQ+PKCRWCRS +IDDTCF+RAEALRLPQQVFS
Subjt:  RSSDLHTPISIFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFS

Query:  CD
        CD
Subjt:  CD

A0A1R3H5C1 Uncharacterized protein5.3e-1652.13Show/hide
Query:  SIFLVSFLFLSFLC-VSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        ++F + FL LS L  +S+ D+ +  +S      R LL+LQR    QIPNCGE +S  QC Q+PKCRWCRS  +DD CF ++EA RLPQQVF CD
Subjt:  SIFLVSFLFLSFLC-VSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

A0A2K2AQN8 Uncharacterized protein1.2e-1551.61Show/hide
Query:  IFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQ-QIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        + ++SFL ++ L +S+   S N  S+S + DR+LL+ QR  A+ QIP+C E VS  QCS +P C+WC+S V+DD CFS+AEA RLPQQVF C+
Subjt:  IFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQ-QIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

A0A5A7TT10 Uncharacterized protein3.4e-2377.33Show/hide
Query:  DLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        +LS +R  NSP+S R L +LQRRR QQI NCGEKVSA QCSQ+ KCRWCRS VIDDTCF+RAEALRLPQQVFSCD
Subjt:  DLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

A0A6M2EEZ1 Uncharacterized protein4.8e-1751.61Show/hide
Query:  IFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQ-QIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD
        + ++SFL ++ L +S+   S N  S+S + DR+LL+ QR  A+ QIP+C E VS  QCS +P C+WC+S V+DD CFS+AEA RLPQQVF C+
Subjt:  IFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQ-QIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGAGCTCCGATCTTCACACCCCGATCTCCATTTTCCTCGTCTCCTTCCTCTTCTTATCATTCCTCTGCGTTTCATCTCATGACTTATCCGAGAATCGCATATC
GAACTCGCCCAATTCAGATCGTATTTTATTGAGCTTACAGAGAAGGAGAGCCCAACAGATCCCTAATTGCGGCGAGAAGGTTTCGGCGTTACAGTGTTCCCAGAGCCCCA
AATGCCGGTGGTGTCGGAGCGCTGTCATCGACGATACCTGCTTCTCCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCATGTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGAGCTCCGATCTTCACACCCCGATCTCCATTTTCCTCGTCTCCTTCCTCTTCTTATCATTCCTCTGCGTTTCATCTCATGACTTATCCGAGAATCGCATATC
GAACTCGCCCAATTCAGATCGTATTTTATTGAGCTTACAGAGAAGGAGAGCCCAACAGATCCCTAATTGCGGCGAGAAGGTTTCGGCGTTACAGTGTTCCCAGAGCCCCA
AATGCCGGTGGTGTCGGAGCGCTGTCATCGACGATACCTGCTTCTCCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCATGTGATTGA
Protein sequenceShow/hide protein sequence
MGRSSDLHTPISIFLVSFLFLSFLCVSSHDLSENRISNSPNSDRILLSLQRRRAQQIPNCGEKVSALQCSQSPKCRWCRSAVIDDTCFSRAEALRLPQQVFSCD