; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013402 (gene) of Snake gourd v1 genome

Gene IDTan0013402
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG04:19971443..19971949
RNA-Seq ExpressionTan0013402
SyntenyTan0013402
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648167.1 hypothetical protein Csa_018435 [Cucumis sativus]4.1e-4152.83Show/hide
Query:  MLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFT
        +LLV+LLL     +M+    K  KN++P   PK         P+V    + +EIHNDLRMF+LD+HC+SKD+ LGLH+LFPDE+Q+WSF+GN + TT F 
Subjt:  MLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFT

Query:  CTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDMLR
        C L+WE G LEFD F +   F+T YCG  TC+WSARQDGVYL +  G+ VF NYW+M+R
Subjt:  CTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDMLR

KGN51432.1 hypothetical protein Csa_007732 [Cucumis sativus]4.1e-4151.2Show/hide
Query:  MAQHHHQLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGN
        MA H   L++L++ L +   F+MSMA   F                P    ++ LH Y IEIHNDL M+LLD+HCFSKDN LGLH+LFP E Q+WSF+ N
Subjt:  MAQHHHQLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGN

Query:  LLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML
           TT+F C L+WENG+LEFD F  + +FL  +CG  TC WSARQDGVYL +  G++VF++YWDML
Subjt:  LLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML

XP_008453055.1 PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]4.6e-4059.2Show/hide
Query:  PAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWS
        P  P    PLV+ H +NI I+N+L+M+LLD+HC+SKD+ LG  VL+P++ Q+WSFRGN LGTT F C L+WENG LEFD F ND  FLT +C  S+C WS
Subjt:  PAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWS

Query:  ARQDGVYLADKNGQFVFKNYWDMLR
        ARQDGVYL ++NGQ VF   W+M+R
Subjt:  ARQDGVYLADKNGQFVFKNYWDMLR

XP_022942056.1 S-protein homolog 1-like [Cucurbita moschata]8.6e-3947.5Show/hide
Query:  QLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTR
        +L LL++LLL   S  MS+A  K  +          P  P   +P ++L  +++ I N LRM+LLD+HC SKD+ LG+ V++PD+ Q WSFRGN LG+T 
Subjt:  QLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTR

Query:  FTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML
        F C L+W  G +EFD F +D +F+T++CG S+CVW+A+QDG+YLAD+NGQ VFK++W+++
Subjt:  FTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML

XP_023546843.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]1.9e-4150.94Show/hide
Query:  LMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRF
        L+LL++LLL   S  MS+A  K  +          P  P   +P ++L  +++ I N LRM+LLD+HC SKD+ LG+HV++PD+ Q+WSFRGN LG+T F
Subjt:  LMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRF

Query:  TCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML
         C L+W  G +EFD F +D +F+TT+CG S+CVW+A+QDGVYLAD+NGQ VFK++W+ML
Subjt:  TCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML

TrEMBL top hitse value%identityAlignment
A0A0A0KL79 S-protein homolog3.8e-4055.15Show/hide
Query:  KNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLT
        K +N    PK         P+V    + +EIHNDLRMF+LD+HC+SKD+ LGLH+LFPDE+Q+WSF+GN + TT F C L+WE G LEFD F +   F+T
Subjt:  KNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLT

Query:  TYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDMLR
         YCG  TC+WSARQDGVYL +  G+ VF NYW+M+R
Subjt:  TYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDMLR

A0A0A0KSN2 S-protein homolog2.0e-4151.2Show/hide
Query:  MAQHHHQLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGN
        MA H   L++L++ L +   F+MSMA   F                P    ++ LH Y IEIHNDL M+LLD+HCFSKDN LGLH+LFP E Q+WSF+ N
Subjt:  MAQHHHQLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGN

Query:  LLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML
           TT+F C L+WENG+LEFD F  + +FL  +CG  TC WSARQDGVYL +  G++VF++YWDML
Subjt:  LLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML

A0A1S3BUQ9 S-protein homolog2.2e-4059.2Show/hide
Query:  PAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWS
        P  P    PLV+ H +NI I+N+L+M+LLD+HC+SKD+ LG  VL+P++ Q+WSFRGN LGTT F C L+WENG LEFD F ND  FLT +C  S+C WS
Subjt:  PAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWS

Query:  ARQDGVYLADKNGQFVFKNYWDMLR
        ARQDGVYL ++NGQ VF   W+M+R
Subjt:  ARQDGVYLADKNGQFVFKNYWDMLR

A0A6J1F5H5 S-protein homolog6.0e-3850.31Show/hide
Query:  MLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFT
        MLL+VL+L+  S + SM     + N+ P+     P       P  +   + +EIHNDLRMF+LD HC SKD+ LGLH+LFPDE Q+WSF  N LGTT F 
Subjt:  MLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFT

Query:  CTLKWENGILEFDVFY-NDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML
        C L+W+ G+LEFD F+ N  + L  YC  +TC+WSARQDGVYL +++   VF  YWDML
Subjt:  CTLKWENGILEFDVFY-NDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML

A0A6J1FMU2 S-protein homolog4.2e-3947.5Show/hide
Query:  QLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTR
        +L LL++LLL   S  MS+A  K  +          P  P   +P ++L  +++ I N LRM+LLD+HC SKD+ LG+ V++PD+ Q WSFRGN LG+T 
Subjt:  QLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTR

Query:  FTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML
        F C L+W  G +EFD F +D +F+T++CG S+CVW+A+QDG+YLAD+NGQ VFK++W+++
Subjt:  FTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDML

SwissProt top hitse value%identityAlignment
F4JLS0 S-protein homolog 15.1e-1035.48Show/hide
Query:  HCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADK-NGQFVFKNYWDM
        HC SK++ LG   L    R +W+F  N+L +T F C +  +NG +  +VF++D   L   CG   C+W+A+ DG+YL +  +G+ V    W++
Subjt:  HCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADK-NGQFVFKNYWDM

P0DN92 S-protein homolog 243.4e-0629.9Show/hide
Query:  HSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTL---KWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVY
        H   + I ND   +LL  HC S+D+ LG H+L   E   W F  N   +T + C     + + G+  F+++  +  F       + C W A +DG+Y
Subjt:  HSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTL---KWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVY

Q2HQ46 S-protein homolog 741.3e-0836.96Show/hide
Query:  HCFSKDNHLG-LHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKN-GQFVFKNYW
        HC SK+N LG +++ F D R +W+F  N+L +T F C +  ++G +   VF++D   L   C    CVW+A+ DG+YL +   G+ V    W
Subjt:  HCFSKDNHLG-LHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKN-GQFVFKNYW

Q9LVX2 S-protein homolog 316.9e-0735.05Show/hide
Query:  IEIHNDLRMFL-LDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNG
        I I N+L+    L   C+SK++ +G  ++        SFR N+ GTTRF CTLK       +  F     + T Y  G+   W AR+DG+YL  + G
Subjt:  IEIHNDLRMFL-LDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNG

Q9LW22 S-protein homolog 212.6e-0633Show/hide
Query:  LLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTL------KWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYW
        +L  HC SK+N +G+  L   E  ++SF+ N  GTT F C L      K   GI  +      A        GS+  W AR DG+Y    +    +K YW
Subjt:  LLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTL------KWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYW

Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family5.8e-0934.74Show/hide
Query:  LDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLT-TYCG-GSTCVWSARQDGVYLADKNGQFVFKNYW
        L  HC +K   LG+H L P E+ ++ FR NL  TT +TCT  W      FD+F  D    + + CG    C+W   + G   A ++G   F   W
Subjt:  LDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLT-TYCG-GSTCVWSARQDGVYLADKNGQFVFKNYW

AT2G06090.1 Plant self-incompatibility protein S1 family1.7e-0832.61Show/hide
Query:  LLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENG---ILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFV
        +L  HC SKD+ LG+H +      N+ F  ++ G T F CTL    G    + F  +    +F+ +   G   +W A  DG+YL D++  FV
Subjt:  LLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENG---ILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFV

AT3G27680.1 Plant self-incompatibility protein S1 family4.9e-0835.05Show/hide
Query:  IEIHNDLRMFL-LDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNG
        I I N+L+    L   C+SK++ +G  ++        SFR N+ GTTRF CTLK       +  F     + T Y  G+   W AR+DG+YL  + G
Subjt:  IEIHNDLRMFL-LDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNG

AT4G16295.1 S-protein homologue 13.6e-1135.48Show/hide
Query:  HCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADK-NGQFVFKNYWDM
        HC SK++ LG   L    R +W+F  N+L +T F C +  +NG +  +VF++D   L   CG   C+W+A+ DG+YL +  +G+ V    W++
Subjt:  HCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADK-NGQFVFKNYWDM

AT4G29035.1 Plant self-incompatibility protein S1 family9.0e-1036.96Show/hide
Query:  HCFSKDNHLG-LHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKN-GQFVFKNYW
        HC SK+N LG +++ F D R +W+F  N+L +T F C +  ++G +   VF++D   L   C    CVW+A+ DG+YL +   G+ V    W
Subjt:  HCFSKDNHLG-LHVLFPDERQNWSFRGNLLGTTRFTCTLKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKN-GQFVFKNYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAACATCATCATCAACTCATGTTATTGGTTGTGCTCTTGCTTGTAACGACCTCCTTTAACATGTCAATGGCGGGAGGCAAGTTTGATAAAAATCGAAATCCTCA
AGTACTCCCCAAATTCCCTGCTGGACCACCAAGTGGAAGACCTCTCGTTTCTCTTCATAGTTATAACATCGAGATTCATAATGACTTGCGTATGTTCTTGTTGGATACCC
ATTGCTTCTCCAAAGACAATCATTTAGGGTTGCATGTACTCTTCCCAGATGAGCGACAAAATTGGTCGTTTAGAGGAAATTTGTTGGGGACGACGAGATTTACTTGCACA
TTAAAGTGGGAAAATGGAATTTTAGAATTTGACGTCTTTTATAATGATGCTTCTTTCTTGACGACTTATTGTGGCGGTTCAACGTGTGTTTGGAGTGCCAGGCAAGATGG
GGTTTATTTGGCCGACAAAAATGGTCAATTTGTTTTTAAAAATTATTGGGATATGCTTAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAACATCATCATCAACTCATGTTATTGGTTGTGCTCTTGCTTGTAACGACCTCCTTTAACATGTCAATGGCGGGAGGCAAGTTTGATAAAAATCGAAATCCTCA
AGTACTCCCCAAATTCCCTGCTGGACCACCAAGTGGAAGACCTCTCGTTTCTCTTCATAGTTATAACATCGAGATTCATAATGACTTGCGTATGTTCTTGTTGGATACCC
ATTGCTTCTCCAAAGACAATCATTTAGGGTTGCATGTACTCTTCCCAGATGAGCGACAAAATTGGTCGTTTAGAGGAAATTTGTTGGGGACGACGAGATTTACTTGCACA
TTAAAGTGGGAAAATGGAATTTTAGAATTTGACGTCTTTTATAATGATGCTTCTTTCTTGACGACTTATTGTGGCGGTTCAACGTGTGTTTGGAGTGCCAGGCAAGATGG
GGTTTATTTGGCCGACAAAAATGGTCAATTTGTTTTTAAAAATTATTGGGATATGCTTAGAAAATGA
Protein sequenceShow/hide protein sequence
MAQHHHQLMLLVVLLLVTTSFNMSMAGGKFDKNRNPQVLPKFPAGPPSGRPLVSLHSYNIEIHNDLRMFLLDTHCFSKDNHLGLHVLFPDERQNWSFRGNLLGTTRFTCT
LKWENGILEFDVFYNDASFLTTYCGGSTCVWSARQDGVYLADKNGQFVFKNYWDMLRK