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Tan0013407 (gene) of Snake gourd v1 genome

Gene IDTan0013407
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:85099075..85099356
RNA-Seq ExpressionTan0013407
SyntenyTan0013407
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584453.1 hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1089.47Show/hide
Query:  QPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYF
        QPSFCGV+ KEKTNGIHHSSEMVAEFNA NPTCS LYF
Subjt:  QPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYF
KGN63987.1 hypothetical protein Csa_014108 [Cucumis sativus]2.7e-2291.23Show/hide
Query:  MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFL
        MPAIC DHIAFQCLLDFQPSFCGVKGKEKTNGIHHSS+MVAEFNA NPTCS LYF L
Subjt:  MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFL
TrEMBL top hitse value%identityAlignment
A0A0A0LTA5 Uncharacterized protein1.3e-2291.23Show/hide
Query:  MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFL
        MPAIC DHIAFQCLLDFQPSFCGVKGKEKTNGIHHSS+MVAEFNA NPTCS LYF L
Subjt:  MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCCATATGCATTGATCATATAGCTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAAGACCAATGGGATCCACCATAGCAG
TGAGATGGTTGCAGAATTTAATGCTGACAACCCAACTTGTTCCATCTTATATTTTTTTCTCTGTACTATCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCCATATGCATTGATCATATAGCTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAAGACCAATGGGATCCACCATAGCAG
TGAGATGGTTGCAGAATTTAATGCTGACAACCCAACTTGTTCCATCTTATATTTTTTTCTCTGTACTATCACTTAA
Protein sequenceShow/hide protein sequence
MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFLCTIT