; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013442 (gene) of Snake gourd v1 genome

Gene IDTan0013442
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB3 domain-containing protein
Genome locationLG03:61647868..61649034
RNA-Seq ExpressionTan0013442
SyntenyTan0013442
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2321161.1 hypothetical protein GH714_034854 [Hevea brasiliensis]1.6e-0831.62Show/hide
Query:  PDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKE-EFLLPEEEAELKSGR-TLRVQLIEPDGESRSTITLNYR-REKESYELTSEW
        PD P E+   IR +     +++I+K+++   L+  R+R +I +K +++  FL+ +E+++LK  +  + V L+EP G+    +   +  +   +Y LTS W
Subjt:  PDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKE-EFLLPEEEAELKSGR-TLRVQLIEPDGESRSTITLNYR-REKESYELTSEW

Query:  NFVVARHH---NELLKREALLRVWHFRVNGMLWLAL
        N V+ R+H   +   K++ ++++W FR NG LWLAL
Subjt:  NFVVARHH---NELLKREALLRVWHFRVNGMLWLAL

KAG8648154.1 hypothetical protein MANES_09G155401v8, partial [Manihot esculenta]1.5e-0630.53Show/hide
Query:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYR-REKESYELTSEWN
        PP+ P E+M  I  +     +++I+K+L+   L+   +R++I +K +K EFL  +E+ +L     + V+L+EP G         +  R    Y LT+ W 
Subjt:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYR-REKESYELTSEWN

Query:  FVVARHHNELLKREALLRVWHFRVNGMLWLA
         V+ R  N   K+  ++++W FRV G L  A
Subjt:  FVVARHHNELLKREALLRVWHFRVNGMLWLA

XP_021624433.1 putative B3 domain-containing protein At2g27410 [Manihot esculenta]6.9e-0728.03Show/hide
Query:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRREKES-YELTSEWN
        PP+ P+E+M  I  +     +++I+K+++   L+   +R++I ++ ++ EFL  +E+ +L   +++ V+L+EP G         +  +  S Y LT+ W 
Subjt:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRREKES-YELTSEWN

Query:  FVVARHHNELLKREALLRVWHFRVNGMLWLAL
         V+        K+  ++++W FRV G L LAL
Subjt:  FVVARHHNELLKREALLRVWHFRVNGMLWLAL

XP_022156187.1 VID27-like protein [Momordica charantia]6.4e-2137.27Show/hide
Query:  QIKEEKDARMQKSTRRQGSSSKY----------PNSSDSDGDGGRGIRLIDKD-PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKG
        +I+EEKD  M+++T+ + S S             +SS+SDG+       I  + PP+FP EF K + D  S RPR+L+ K+L    + E RNR++I  K 
Subjt:  QIKEEKDARMQKSTRRQGSSSKY----------PNSSDSDGDGGRGIRLIDKD-PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKG

Query:  MKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRR----EKESYELTSEWNFVVARHHNELLKREALLRVWHFR-----VNGMLWLALEVVDEH
        +KE FLL +EE  + +G  + V++IEPD  + S +TL  RR    +  SY LT +W+ VVAR +++ LKR   +RVW+F      V   L  A+EV +  
Subjt:  MKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRR----EKESYELTSEWNFVVARHHNELLKREALLRVWHFR-----VNGMLWLALEVVDEH

Query:  KYDCLIFVTQMFRKWALQNV
        K     FV ++ +KW  QN+
Subjt:  KYDCLIFVTQMFRKWALQNV

XP_039158353.1 B3 domain-containing protein At2g32645-like [Eucalyptus grandis]1.8e-0729.08Show/hide
Query:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITL---NYRREKESYELTSE
        P   P ++M  I++       +++ K L    +S  ++R++I    +++ FL  EE   L     ++V LIEP  E    + L   NY+    SY LT  
Subjt:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITL---NYRREKESYELTSE

Query:  WNFVVARHHNELLKREALLRVWHFRVNGMLWLALEVVDEHK
        WN V   +    L ++ ++++W FRV+G LW  L+ V++H+
Subjt:  WNFVVARHHNELLKREALLRVWHFRVNGMLWLALEVVDEHK

TrEMBL top hitse value%identityAlignment
A0A059AMI0 Uncharacterized protein1.7e-0625.51Show/hide
Query:  LIKETAVKLQEKQIKEEKDARMQKSTRRQGSSSKYPNSSDSDGDGGRGIRLIDKDPPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYK
        L K T+  L+E  ++  +  R+     +  +  ++P                 ++P + P  +M+ I++       +++ K L    +S  ++R++I  K
Subjt:  LIKETAVKLQEKQIKEEKDARMQKSTRRQGSSSKYPNSSDSDGDGGRGIRLIDKDPPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYK

Query:  GMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITL---NYRREKESYELTSEWNFVVARHHNELLKREALLRVWHFRVNGMLWLALEVVDEHK
         +++ FL  EE   L     ++V LIEP  E  S + L   NY+ +  SY LT  WN V   +    L ++ ++++W FRV+G LW  L+ V++H+
Subjt:  GMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITL---NYRREKESYELTSEWNFVVARHHNELLKREALLRVWHFRVNGMLWLALEVVDEHK

A0A2C9VBB8 Uncharacterized protein7.5e-0730.53Show/hide
Query:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYR-REKESYELTSEWN
        PP+ P E+M  I  +     +++I+K+L+   L+   +R++I +K +K EFL  +E+ +L     + V+L+EP G         +  R    Y LT+ W 
Subjt:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYR-REKESYELTSEWN

Query:  FVVARHHNELLKREALLRVWHFRVNGMLWLA
         V+ R  N   K+  ++++W FRV G L  A
Subjt:  FVVARHHNELLKREALLRVWHFRVNGMLWLA

A0A2C9VD50 Uncharacterized protein (Fragment)3.4e-0728.03Show/hide
Query:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRREKES-YELTSEWN
        PP+ P+E+M  I  +     +++I+K+++   L+   +R++I ++ ++ EFL  +E+ +L   +++ V+L+EP G         +  +  S Y LT+ W 
Subjt:  PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRREKES-YELTSEWN

Query:  FVVARHHNELLKREALLRVWHFRVNGMLWLAL
         V+        K+  ++++W FRV G L LAL
Subjt:  FVVARHHNELLKREALLRVWHFRVNGMLWLAL

A0A6A6N4T1 Uncharacterized protein8.0e-0931.62Show/hide
Query:  PDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKE-EFLLPEEEAELKSGR-TLRVQLIEPDGESRSTITLNYR-REKESYELTSEW
        PD P E+   IR +     +++I+K+++   L+  R+R +I +K +++  FL+ +E+++LK  +  + V L+EP G+    +   +  +   +Y LTS W
Subjt:  PDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKE-EFLLPEEEAELKSGR-TLRVQLIEPDGESRSTITLNYR-REKESYELTSEW

Query:  NFVVARHH---NELLKREALLRVWHFRVNGMLWLAL
        N V+ R+H   +   K++ ++++W FR NG LWLAL
Subjt:  NFVVARHH---NELLKREALLRVWHFRVNGMLWLAL

A0A6J1DRC9 VID27-like protein3.1e-2137.27Show/hide
Query:  QIKEEKDARMQKSTRRQGSSSKY----------PNSSDSDGDGGRGIRLIDKD-PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKG
        +I+EEKD  M+++T+ + S S             +SS+SDG+       I  + PP+FP EF K + D  S RPR+L+ K+L    + E RNR++I  K 
Subjt:  QIKEEKDARMQKSTRRQGSSSKY----------PNSSDSDGDGGRGIRLIDKD-PPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKG

Query:  MKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRR----EKESYELTSEWNFVVARHHNELLKREALLRVWHFR-----VNGMLWLALEVVDEH
        +KE FLL +EE  + +G  + V++IEPD  + S +TL  RR    +  SY LT +W+ VVAR +++ LKR   +RVW+F      V   L  A+EV +  
Subjt:  MKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRR----EKESYELTSEWNFVVARHHNELLKREALLRVWHFR-----VNGMLWLALEVVDEH

Query:  KYDCLIFVTQMFRKWALQNV
        K     FV ++ +KW  QN+
Subjt:  KYDCLIFVTQMFRKWALQNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCTAGAGCTTCCGCCGCCGGATCAGGTGGAGACGACGGCGGCGACGACCGACGCAAGATCGTCCAATCTTCGCGCAAGAGACACAAATCCGGCAGGGTGAAAAA
ATCAACTCCACTTACAAAAATGGAGACTATCAAAGAAGAAGAAGACGACGTTCCGATAAGAAAATCCTCAAGAAAACCGGAATCCTCCGCCTCTGCCTCCGCCTCCGCCT
CCACCTCTGCCTCTGCCTCTCCCACTCCCTCTCCCTCTGCCTCTCCCTCTGCCTCTCCCTCTGCCTCTCCCTCCTCCGCCGCTGCGAGGATGATAAAAGCAACTGCAGTT
AAACTTCAAGAAAAGCAGATCAAAGAAGAAAAAGGCGATCGGATGATAAAAGCAACTGCAGTTAAACTTCAAGAAAAGCAGATCAAAGAAGAAAAAGGCGCTCGGATGAA
GAAATCGACAAGTAGACCGGAATCCTCCGCCTCCGCCTCTGGCTCTCCCTCTGCCTCGGCCGCCGCCGCCGCCGTGAGATTGATAAAAGAAACGGCAGTTAAACTTCAAG
AAAAGCAGATCAAAGAAGAAAAAGATGCTCGGATGCAGAAATCGACAAGAAGACAGGGATCCTCCTCCAAATATCCAAATTCCTCGGACTCAGACGGCGACGGAGGAAGA
GGGATTCGACTAATCGATAAAGATCCGCCAGACTTCCCCGCGGAATTCATGAAATTTATCCGAGATCGAGATTCGTTTCGGCCTAGGGTTCTAATCGTGAAAAGACTGTA
CATACTGAGCCTGTCCGAGAAGCGAAATCGAATAACAATTTGGTACAAGGGGATGAAGGAGGAGTTCTTGCTACCAGAGGAAGAAGCAGAGTTGAAATCCGGCAGGACAC
TGAGGGTGCAGTTGATCGAGCCGGACGGCGAATCGAGGAGTACGATTACATTGAACTACAGAAGGGAGAAGGAATCGTACGAACTGACCAGCGAGTGGAATTTTGTGGTG
GCGCGTCATCACAATGAACTGCTGAAGAGGGAAGCATTGCTTAGGGTTTGGCATTTTCGCGTTAATGGAATGCTCTGGCTTGCGCTTGAAGTTGTTGATGAACATAAATA
TGATTGTTTAATATTCGTCACCCAAATGTTTCGCAAATGGGCTCTCCAAAATGTTTTGGGTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCTAGAGCTTCCGCCGCCGGATCAGGTGGAGACGACGGCGGCGACGACCGACGCAAGATCGTCCAATCTTCGCGCAAGAGACACAAATCCGGCAGGGTGAAAAA
ATCAACTCCACTTACAAAAATGGAGACTATCAAAGAAGAAGAAGACGACGTTCCGATAAGAAAATCCTCAAGAAAACCGGAATCCTCCGCCTCTGCCTCCGCCTCCGCCT
CCACCTCTGCCTCTGCCTCTCCCACTCCCTCTCCCTCTGCCTCTCCCTCTGCCTCTCCCTCTGCCTCTCCCTCCTCCGCCGCTGCGAGGATGATAAAAGCAACTGCAGTT
AAACTTCAAGAAAAGCAGATCAAAGAAGAAAAAGGCGATCGGATGATAAAAGCAACTGCAGTTAAACTTCAAGAAAAGCAGATCAAAGAAGAAAAAGGCGCTCGGATGAA
GAAATCGACAAGTAGACCGGAATCCTCCGCCTCCGCCTCTGGCTCTCCCTCTGCCTCGGCCGCCGCCGCCGCCGTGAGATTGATAAAAGAAACGGCAGTTAAACTTCAAG
AAAAGCAGATCAAAGAAGAAAAAGATGCTCGGATGCAGAAATCGACAAGAAGACAGGGATCCTCCTCCAAATATCCAAATTCCTCGGACTCAGACGGCGACGGAGGAAGA
GGGATTCGACTAATCGATAAAGATCCGCCAGACTTCCCCGCGGAATTCATGAAATTTATCCGAGATCGAGATTCGTTTCGGCCTAGGGTTCTAATCGTGAAAAGACTGTA
CATACTGAGCCTGTCCGAGAAGCGAAATCGAATAACAATTTGGTACAAGGGGATGAAGGAGGAGTTCTTGCTACCAGAGGAAGAAGCAGAGTTGAAATCCGGCAGGACAC
TGAGGGTGCAGTTGATCGAGCCGGACGGCGAATCGAGGAGTACGATTACATTGAACTACAGAAGGGAGAAGGAATCGTACGAACTGACCAGCGAGTGGAATTTTGTGGTG
GCGCGTCATCACAATGAACTGCTGAAGAGGGAAGCATTGCTTAGGGTTTGGCATTTTCGCGTTAATGGAATGCTCTGGCTTGCGCTTGAAGTTGTTGATGAACATAAATA
TGATTGTTTAATATTCGTCACCCAAATGTTTCGCAAATGGGCTCTCCAAAATGTTTTGGGTTTCTAA
Protein sequenceShow/hide protein sequence
MSARASAAGSGGDDGGDDRRKIVQSSRKRHKSGRVKKSTPLTKMETIKEEEDDVPIRKSSRKPESSASASASASTSASASPTPSPSASPSASPSASPSSAAARMIKATAV
KLQEKQIKEEKGDRMIKATAVKLQEKQIKEEKGARMKKSTSRPESSASASGSPSASAAAAAVRLIKETAVKLQEKQIKEEKDARMQKSTRRQGSSSKYPNSSDSDGDGGR
GIRLIDKDPPDFPAEFMKFIRDRDSFRPRVLIVKRLYILSLSEKRNRITIWYKGMKEEFLLPEEEAELKSGRTLRVQLIEPDGESRSTITLNYRREKESYELTSEWNFVV
ARHHNELLKREALLRVWHFRVNGMLWLALEVVDEHKYDCLIFVTQMFRKWALQNVLGF