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Tan0013445 (gene) of Snake gourd v1 genome

Gene IDTan0013445
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein translocase complex, SecE/Sec61-gamma subunit
Genome locationLG02:6113105..6115445
RNA-Seq ExpressionTan0013445
SyntenyTan0013445
Gene Ontology termsGO:0006605 - protein targeting (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0090351 - seedling development (biological process)
GO:0009528 - plastid inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001901 - Protein translocase complex, SecE/Sec61-gamma subunit
IPR038379 - SecE superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589021.1 hypothetical protein SDJN03_17586, partial [Cucurbita argyrosperma subsp. sororia]2.0e-6685.99Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI
        MVI SALGANHIGM SLPHS ++FHV+YNTAR NKANIFQ LPTRIS+R  HLYADRMGFN+AASGRDNQQL FNDE PPEPFFL +IKETVWGLRSL I
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI

Query:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        FLAEQPSQLKYIEWPSFQ+TLKTAT ALVLVALLIVALSSVDS  SYILT ILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

KAG7015285.1 hypothetical protein SDJN02_22920, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6685.99Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI
        MVI SALGANHIGM SLPHS ++FHV+YNTAR NKANIFQ LPTRIS+R  HLYADRMGFN+AASGRDNQQL FNDE PPEPFFL +IKETVWGLRSL I
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI

Query:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        FLAEQPSQLKYIEWPSFQ+TLKTAT ALVLVALLIVALSSVDS  SYILT ILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

XP_022928229.1 uncharacterized protein LOC111435124 [Cucurbita moschata]3.5e-6685.99Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI
        MVI SALGANHIGM SLPHS + FHV+YNTAR NKANIFQ LPTRIS+R  HLYADRMGFN+AASGRDNQQL FNDE PPEPFFL +IKETVWGLRSL I
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI

Query:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        FLAEQPSQLKYIEWPSFQ+TLKTAT ALVLVALLIVALSSVDS  SYILT ILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

XP_022989177.1 uncharacterized protein LOC111486331 [Cucurbita maxima]5.6e-6484.08Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI
        MVI SALGANHIGM SLPHS + F V YNTARFNKAN+FQ LPTRIS R  HLYADRMGFN+AASGRDN QL FNDE PPEPFFL +IKETVWGLRSL I
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI

Query:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        FLAEQPSQLKYIEWPSFQ+TLKTAT ALVLVALLIVALSSVDS  S+ILT ILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

XP_023529805.1 uncharacterized protein LOC111792519 [Cucurbita pepo subsp. pepo]5.4e-6786.62Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI
        MVI SALGANHIGM SLPHS + FHV+YNTARFNKANIFQ LPTRIS+R+ HLYADRMGFN+AASGRDNQQL FNDE PPEPFFL +IKETVWGLRSL I
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI

Query:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        FLAEQPSQLKYIEWPSFQ+TLKTAT ALVLVALLIVALSSVDS  SYILT ILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

TrEMBL top hitse value%identityAlignment
A0A0A0K1C8 Uncharacterized protein1.6e-5678.48Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHV-QYNTARFNKANIFQRLPTRISKRA-RHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL
        MVI S LG  HIG+I LP SK+ +HV QYNT R NK+++FQRL TRISKR+  HLYA RMGFN+AA  ++ QQ SFNDE PPEPFFLSLIKET WGLRSL
Subjt:  MVIVSALGANHIGMISLPHSKQSFHV-QYNTARFNKANIFQRLPTRISKRA-RHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRT
        LIFL EQPSQLKYIEWPSFQ+TLKTATLALVLVALLIVALSSVDSA SY+LTLILRRT
Subjt:  LIFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRT

A0A1S3BJG9 uncharacterized protein LOC1034902694.6e-5677.36Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHV-QYNTARFNKANIFQRLPTRISKRA-RHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL
        MVI S LG +HIG+I LP  K  +HV +YN  R NK+++FQRL TRISKR+ +HLYA RMGFN+AASG++ QQ SFNDEWP EPFFLSLIKET WGLRSL
Subjt:  MVIVSALGANHIGMISLPHSKQSFHV-QYNTARFNKANIFQRLPTRISKRA-RHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSL

Query:  LIFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        LIFL EQPSQLKYIEWPSFQ+TLKTATLALVLVALLIVALSSVDSA SY+LTL+LRRTS
Subjt:  LIFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

A0A6J1C3M0 uncharacterized protein LOC1110080494.2e-5775.32Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQY-NTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLL
        M I SALGANHIGMI  PH KQ  H+ + NT RFNK+N FQ+LP  IS+R+ HLYA RM FN+AASGR+N QL+FN+E+PPEPF LSLI+E +WGLRSLL
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQY-NTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLL

Query:  IFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        IFL EQPSQLKYIEWPSFQ+TLKTATL LVLVALLIVALSSVDSA SYILTL+LRR++
Subjt:  IFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

A0A6J1EK97 uncharacterized protein LOC1114351241.7e-6685.99Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI
        MVI SALGANHIGM SLPHS + FHV+YNTAR NKANIFQ LPTRIS+R  HLYADRMGFN+AASGRDNQQL FNDE PPEPFFL +IKETVWGLRSL I
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI

Query:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        FLAEQPSQLKYIEWPSFQ+TLKTAT ALVLVALLIVALSSVDS  SYILT ILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

A0A6J1JF36 uncharacterized protein LOC1114863312.7e-6484.08Show/hide
Query:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI
        MVI SALGANHIGM SLPHS + F V YNTARFNKAN+FQ LPTRIS R  HLYADRMGFN+AASGRDN QL FNDE PPEPFFL +IKETVWGLRSL I
Subjt:  MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLI

Query:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS
        FLAEQPSQLKYIEWPSFQ+TLKTAT ALVLVALLIVALSSVDS  S+ILT ILRRTS
Subjt:  FLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38490.1 unknown protein3.3e-2270.67Show/hide
Query:  EPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRR
        EP +LSL+++ VW  RSLL F+AEQPSQLKYIEWP+F +TLKTATL+L LVA+ IVALSSVD+A  YIL LILR+
Subjt:  EPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGATCGTTTCTGCACTTGGGGCTAATCATATTGGTATGATTTCCCTTCCTCATTCAAAGCAATCATTCCACGTTCAGTACAACACAGCCAGATTCAACAAGGCCAA
TATCTTTCAGAGACTGCCCACAAGGATTTCCAAAAGGGCTAGACATCTCTATGCTGATAGAATGGGCTTTAACTATGCTGCATCTGGAAGAGATAATCAGCAACTGAGCT
TTAATGATGAATGGCCTCCAGAACCTTTCTTCCTGAGTCTAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTAATATTTCTGGCTGAGCAGCCCAGTCAACTGAAG
TACATTGAGTGGCCTAGCTTCCAAAACACGCTGAAGACTGCCACATTAGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTCGGCGTTCAGCTA
CATTTTAACTTTAATTCTCAGAAGAACCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTCATCCTTCATTCTAAAGGCCCACTCATTGTGGGTGCAGTCACCCTGCTCACCCCGTTGCAGTCCGCAAGAAGCCTGAAATTTTCGAGTGGGCGTCATTAAAC
TCTTGCTCTAAGATGGTGATCGTTTCTGCACTTGGGGCTAATCATATTGGTATGATTTCCCTTCCTCATTCAAAGCAATCATTCCACGTTCAGTACAACACAGCCAGATT
CAACAAGGCCAATATCTTTCAGAGACTGCCCACAAGGATTTCCAAAAGGGCTAGACATCTCTATGCTGATAGAATGGGCTTTAACTATGCTGCATCTGGAAGAGATAATC
AGCAACTGAGCTTTAATGATGAATGGCCTCCAGAACCTTTCTTCCTGAGTCTAATTAAAGAAACCGTTTGGGGATTGAGATCATTGTTAATATTTCTGGCTGAGCAGCCC
AGTCAACTGAAGTACATTGAGTGGCCTAGCTTCCAAAACACGCTGAAGACTGCCACATTAGCTCTTGTTCTCGTTGCACTGTTGATTGTAGCACTCTCATCAGTGGACTC
GGCGTTCAGCTACATTTTAACTTTAATTCTCAGAAGAACCTCATAATAAATTCTGGTACTTTTTACTTAATTGTTACAACACTTCTGTTTTTCATTTTTAAATTGTTGGC
TGAGAGAGTGAGGGTTCTTGGTATATTAATGTAGTTGGAGATGTTCTGAAAAAAGGTAATACACAAGCATCTCTTTGAAATCGGGCTACCGTAAGGAAAGTAGAGAATGT
TGTCTTTCAGGATTCTCGCATACGTACAGTTACGACCACCCTGTACGTACAATTAGGATTGTCGTAAGTGACTACCCTACACTTCCTTGTAGTACGAGACATAATTTGTC
ATCCCCTTCCCCCCTTCCTTTGTTGAGTTTCTGGATGGGTACTGAACTAGAAGGGTGTATCATTGAAACTAGGCCATCTCGCTCCTTCCTTTCTTTTGTGACGATACCGT
TTTCTTTTCAAGGAGTACAGGTCGTAGCATAGGGGACGTCTAAATCACACTATTTGAACTCTTACAGCGTCTCCAGCTCCCGTCGAGCTTACCAAATAGACATCCTGAAT
CTCTTCCTGATGATCCTCAACCTCCAGAAAAACACACTTCCAAATACCTATCACATACTCATATCTGAGTGTGCCCTTTTCCTCTCTGTTATAATTGAGACAGGACTCAA
CTGAATTGTATCTACTTCATTCTAGTACCCAATCTCAAGAGCCACATGATGCTTGAACACATCCAAGACTTGTAGCAGTGTAGCTGCAGATAAGGTTTGTTAAAGTAGAT
CTTGAATGACCATGTTTTGCTTAATGAAG
Protein sequenceShow/hide protein sequence
MVIVSALGANHIGMISLPHSKQSFHVQYNTARFNKANIFQRLPTRISKRARHLYADRMGFNYAASGRDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLK
YIEWPSFQNTLKTATLALVLVALLIVALSSVDSAFSYILTLILRRTS