; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013447 (gene) of Snake gourd v1 genome

Gene IDTan0013447
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTF-B3 domain-containing protein
Genome locationLG09:64739028..64739426
RNA-Seq ExpressionTan0013447
SyntenyTan0013447
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]2.9e-4266.93Show/hide
Query:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG
        P+  I NIIG CSPPF KQLTK+DVT+ QGRL L KEFVN +L PMFN DE L  GI VTV+D+EGR+YDMTF+LW SKLYVL K WK+FY  N LT+  
Subjt:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG

Query:  ENVTLWMFRHVGTQKLCFAITRGGAGG
        E +TLWMFRHV   KLCFAI RG   G
Subjt:  ENVTLWMFRHVGTQKLCFAITRGGAGG

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4672.18Show/hide
Query:  PVPVPAIA---NIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNN
        PV +PA+A   NIIGA SPP+EK+LTKSDV+EGQGRL +RKEFV  HL PMFNADED   GIDVTV++ EGRQYDM FKLWASKLYVL KGW +FYKTNN
Subjt:  PVPVPAIA---NIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNN

Query:  LTKAGENVTLWMFRHVGTQKLCFAITRGGAGGP
        LT  G  VTLWMFRHV T K+CFA+T G  G P
Subjt:  LTKAGENVTLWMFRHVGTQKLCFAITRGGAGGP

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-4672.18Show/hide
Query:  PVPVPAIA---NIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNN
        PV +PA+A   NIIGA SPP+EK+LTKSDV+EGQGRL +RKEFV  HL PMFNADED   GIDVTV++ EGRQYDM FKLWASKLYVL KGW +FYKTNN
Subjt:  PVPVPAIA---NIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNN

Query:  LTKAGENVTLWMFRHVGTQKLCFAITRGGAGGP
        LT+ G  VTLWMFRHV T K+CFA+T G  G P
Subjt:  LTKAGENVTLWMFRHVGTQKLCFAITRGGAGGP

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]1.3e-4572.8Show/hide
Query:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG
        P+  I NIIG CSPPF KQLTK+DVT+ QGRL L KEFVNL+L PMFN DEDL  GI V V+D EGR+YDM FKLWASKLYVL K WKEFYKTN+LT+ G
Subjt:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG

Query:  ENVTLWMFRHVGTQKLCFAITRGGA
        E +++WMFRHV TQKLCFAI RG A
Subjt:  ENVTLWMFRHVGTQKLCFAITRGGA

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]7.3e-4165.6Show/hide
Query:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG
        P+  I NIIG CSPPF KQL K+DVTE QGRL L KEFV  +L PMFN  E+L  GI VTV+D+EGR+YDM FK W SKLYVL K W +FYK+NNLT+ G
Subjt:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG

Query:  ENVTLWMFRHVGTQKLCFAITRGGA
        E +++WMFRHV  +KLCFAI RG A
Subjt:  ENVTLWMFRHVGTQKLCFAITRGGA

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein6.2e-4672.8Show/hide
Query:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG
        P+  I NIIG CSPPF KQLTK+DVT+ QGRL L KEFVNL+L PMFN DEDL  GI V V+D EGR+YDM FKLWASKLYVL K WKEFYKTN+LT+ G
Subjt:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG

Query:  ENVTLWMFRHVGTQKLCFAITRGGA
        E +++WMFRHV TQKLCFAI RG A
Subjt:  ENVTLWMFRHVGTQKLCFAITRGGA

A0A0A0LC65 TF-B3 domain-containing protein1.0e-4066.94Show/hide
Query:  IANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVT
        I NIIG CSPPF KQL K+DVTE QGRL L KEFV  +L PMFN  E+L  GI VTV+D+EGR+YDM FK W SKLYVL K W +FYK+NNLT+ GE ++
Subjt:  IANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVT

Query:  LWMFRHVGTQKLCFAITRGGA
        +WMFRHV  +KLCFAI RG A
Subjt:  LWMFRHVGTQKLCFAITRGGA

A0A5D3BAS8 Putative B3 domain-containing protein1.4e-4266.93Show/hide
Query:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG
        P+  I NIIG CSPPF KQLTK+DVT+ QGRL L KEFVN +L PMFN DE L  GI VTV+D+EGR+YDMTF+LW SKLYVL K WK+FY  N LT+  
Subjt:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAG

Query:  ENVTLWMFRHVGTQKLCFAITRGGAGG
        E +TLWMFRHV   KLCFAI RG   G
Subjt:  ENVTLWMFRHVGTQKLCFAITRGGAGG

A0A6J1CTE7 putative B3 domain-containing protein At4g031701.7e-3562.5Show/hide
Query:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFN---ADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLT
        PVPAI ++IG CS  +EK+LT SDV E QGRL + KEFV  +L PMFN    +E+L  GI+VTV++ EGR++ MTFK+WASKLYVLMKGWK F K NNLT
Subjt:  PVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFN---ADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLT

Query:  --KAGENVTLWMFRHVGTQKLCFAITRG
           AGE +TLWMFRH  T  LCFAI  G
Subjt:  --KAGENVTLWMFRHVGTQKLCFAITRG

A0A6N2NDX5 TF-B3 domain-containing protein1.2e-2849.17Show/hide
Query:  VPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGE
        +P +  IIG CS PFEKQLT+SD+ + Q RL++ K     +L P+ N DE+L  GI VT +D  G++++M FK+W SK++VL+ GWK F+  + L K  +
Subjt:  VPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGE

Query:  NVTLWMFRHVGTQKLCFAIT
         VTLWMFR + T+KLCF IT
Subjt:  NVTLWMFRHVGTQKLCFAIT

SwissProt top hitse value%identityAlignment
Q9LM90 B3 domain-containing protein At1g206002.1e-1140.86Show/hide
Query:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVT
        S P +KQL  SDV   Q RL L KE V   + P     ED V G+DV+V+  +G    M FK+W   K  VL  GW +F     L K  + VT
Subjt:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVT

Q9MA32 B3 domain-containing protein At1g059305.1e-0530.09Show/hide
Query:  EKQLTKSDV-TEGQGRLTLR------KEFVNLHLTPMFNAD--EDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWM
        EK L+ +DV T   GR ++        +F+      +   D   D   G+   + D   +++ +  K W    Y L  GW +  K N L KAG+++ LW 
Subjt:  EKQLTKSDV-TEGQGRLTLR------KEFVNLHLTPMFNAD--EDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWM

Query:  FRHVGTQKLCFAI
        FR  G   LCFA+
Subjt:  FRHVGTQKLCFAI

Q9ZR14 Putative B3 domain-containing protein At4g031702.8e-1944.95Show/hide
Query:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHV
        S P +KQL  SDV + Q  L L KE V   + P     E+ V GIDV+V+  +G+   M FK+W   K  VL  GWK+F +   L+   + VT+WMFRH+
Subjt:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHV

Query:  GTQKLCFAI
         T+KLCFAI
Subjt:  GTQKLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g031602.7e-1437.86Show/hide
Query:  KQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHVGTQKLC
        +QL  SDV + Q RL L KE V   +  +   ++    G++V+V+   G  + M  K+W     VL  GWK F K+  L K  + +T+WMFRH  T+++C
Subjt:  KQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHVGTQKLC

Query:  FAI
        FAI
Subjt:  FAI

Arabidopsis top hitse value%identityAlignment
AT1G05930.1 Domain of unknown function (DUF313)3.6e-0630.09Show/hide
Query:  EKQLTKSDV-TEGQGRLTLR------KEFVNLHLTPMFNAD--EDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWM
        EK L+ +DV T   GR ++        +F+      +   D   D   G+   + D   +++ +  K W    Y L  GW +  K N L KAG+++ LW 
Subjt:  EKQLTKSDV-TEGQGRLTLR------KEFVNLHLTPMFNAD--EDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWM

Query:  FRHVGTQKLCFAI
        FR  G   LCFA+
Subjt:  FRHVGTQKLCFAI

AT1G20600.1 AP2/B3-like transcriptional factor family protein1.5e-1240.86Show/hide
Query:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVT
        S P +KQL  SDV   Q RL L KE V   + P     ED V G+DV+V+  +G    M FK+W   K  VL  GW +F     L K  + VT
Subjt:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVT

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)1.9e-1537.86Show/hide
Query:  KQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHVGTQKLC
        +QL  SDV + Q RL L KE V   +  +   ++    G++V+V+   G  + M  K+W     VL  GWK F K+  L K  + +T+WMFRH  T+++C
Subjt:  KQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHVGTQKLC

Query:  FAI
        FAI
Subjt:  FAI

AT4G03170.1 AP2/B3-like transcriptional factor family protein2.0e-2044.95Show/hide
Query:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHV
        S P +KQL  SDV + Q  L L KE V   + P     E+ V GIDV+V+  +G+   M FK+W   K  VL  GWK+F +   L+   + VT+WMFRH+
Subjt:  SPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLW-ASKLYVLMKGWKEFYKTNNLTKAGENVTLWMFRHV

Query:  GTQKLCFAI
         T+KLCFAI
Subjt:  GTQKLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCGGTACCGGTGCCGGCGATCGCGAACATAATCGGAGCGTGCAGCCCACCGTTCGAGAAGCAATTGACGAAAAGCGACGTGACGGAGGGGCAAGGGCGGCTGAC
TCTGAGAAAGGAATTTGTGAATTTGCATTTAACTCCGATGTTCAATGCCGACGAGGATTTGGTAGCGGGAATTGACGTTACGGTTTTTGACGCTGAAGGGAGACAATACG
ACATGACGTTCAAGCTCTGGGCTTCCAAGCTCTACGTTCTCATGAAAGGCTGGAAGGAGTTTTACAAGACCAATAATTTGACCAAGGCTGGAGAAAACGTGACGCTCTGG
ATGTTCCGACATGTCGGCACTCAGAAGCTTTGCTTTGCTATCACTCGGGGAGGGGCTGGTGGGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCGGTACCGGTGCCGGCGATCGCGAACATAATCGGAGCGTGCAGCCCACCGTTCGAGAAGCAATTGACGAAAAGCGACGTGACGGAGGGGCAAGGGCGGCTGAC
TCTGAGAAAGGAATTTGTGAATTTGCATTTAACTCCGATGTTCAATGCCGACGAGGATTTGGTAGCGGGAATTGACGTTACGGTTTTTGACGCTGAAGGGAGACAATACG
ACATGACGTTCAAGCTCTGGGCTTCCAAGCTCTACGTTCTCATGAAAGGCTGGAAGGAGTTTTACAAGACCAATAATTTGACCAAGGCTGGAGAAAACGTGACGCTCTGG
ATGTTCCGACATGTCGGCACTCAGAAGCTTTGCTTTGCTATCACTCGGGGAGGGGCTGGTGGGCCTTGA
Protein sequenceShow/hide protein sequence
MPPVPVPAIANIIGACSPPFEKQLTKSDVTEGQGRLTLRKEFVNLHLTPMFNADEDLVAGIDVTVFDAEGRQYDMTFKLWASKLYVLMKGWKEFYKTNNLTKAGENVTLW
MFRHVGTQKLCFAITRGGAGGP