; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013477 (gene) of Snake gourd v1 genome

Gene IDTan0013477
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Genome locationLG03:65797785..65800019
RNA-Seq ExpressionTan0013477
SyntenyTan0013477
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
InterPro domainsIPR037766 - Protein FAR-RED ELONGATED HYPOCOTYL 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603645.1 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4055.71Show/hide
Query:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEE--------EEEE
        MDQ +H  HH PSH  T  F GF+ W+T  F DVKKKRKLL E+LSL  PTPKLPCWG P S+S SF  Y +D +FKF K  P+EE E        E ++
Subjt:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEE--------EEEE

Query:  IKSNIILRKMAID--KDKVEMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQE
        + +  +  +   D  KDK++   ++YG EEDLLEFGSHGNSS+       QCCSDST Q+LLLP   +++ HDFVLSSGRW+I PE ESK I  PTIDQE
Subjt:  IKSNIILRKMAID--KDKVEMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQE

Query:  FEQYFSVLLP
        FEQYFS +LP
Subjt:  FEQYFSVLLP

KAG7033829.1 hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-4055.24Show/hide
Query:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEE--------EEEE
        MDQ +H  HH PSH  T  F GF+ W+T  F DVKKKRKLL E+LSL  PTPKLPCWG P S+S SF  Y +D + KF K  P+EE E        E ++
Subjt:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEE--------EEEE

Query:  IKSNIILRKMAID--KDKVEMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQE
        + +  +  +   D  KDK++   ++YG EEDLLEFGSHGNSS+       QCCSDST Q+LLLP   +++ HDFVLSSGRW+I PE ESK I  PTIDQE
Subjt:  IKSNIILRKMAID--KDKVEMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQE

Query:  FEQYFSVLLP
        FEQYFS +LP
Subjt:  FEQYFSVLLP

XP_022978296.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima]9.3e-4056.44Show/hide
Query:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR
        MDQ +H  HH PSH  T  F GF+ W+T  F DVKKKRKLL E+LSL  PTPKLPCWG P S+S SF  Y +D +FKF K  P+EE E      ++    
Subjt:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR

Query:  KMAIDKDKV-EMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHD-FVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVL
        ++  +KD + +   ++YG EEDLLEFGSHGNSS+       QCCSDST Q+LLLP   +++NHD FVLSSGRW+I PE ESK I  P IDQEFEQYFS +
Subjt:  KMAIDKDKV-EMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHD-FVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVL

Query:  LP
        LP
Subjt:  LP

XP_023544624.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo]2.9e-4155.29Show/hide
Query:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR
        MDQ +H  HH PSH  T  FPGF+ W+T  F DVKKKRKLL E+LSL  PTPKLPCWG P S+S SF  Y +D +FKF K  P +EE E    K     +
Subjt:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR

Query:  KMAIDKDKVEMQK--------ISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFE
         M+ ++ +++ +K        ++YG EEDLLEFG+HGNSS+       QCCSDST Q+LLLP   +++ HDFVLSSGRW+I PE ESK I  PTIDQEFE
Subjt:  KMAIDKDKVEMQK--------ISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFE

Query:  QYFSVLLP
        QYFS +LP
Subjt:  QYFSVLLP

XP_038883311.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]7.6e-4256.22Show/hide
Query:  HHQPSHCDTD---RFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAID
        HH PSHCDTD    F  F+ WNT G +DVKKKR+LLI++LSL  PT KLPCWG P S S          NFKF K   QEEEE EE   + I +      
Subjt:  HHQPSHCDTD---RFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAID

Query:  KDKVEMQ------KISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVLL
        K++V+MQ      + SYG EEDLLEFGSHG++ +       QCCSDS    LLLP   +N+ HDFVLSSGRW++ PE ESKTIK PTIDQEFEQYFSV L
Subjt:  KDKVEMQ------KISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVLL

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A0A0KZL8 Uncharacterized protein4.5e-3249.36Show/hide
Query:  MDQNHHQLHHQPSHCDTD---------------RFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQE
        MDQN+   HH PSH DTD               R  G ++WNT   VDVK KR+LLI++LSL  PT KLP WG PRS S        + NFKF  + PQE
Subjt:  MDQNHHQLHHQPSHCDTD---------------RFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQE

Query:  EEEEEEEIK------SNIILRKMAIDKDK------VEMQ------KISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLS
        EE+EE E +          L K+AIDK K      V MQ      + SYG EEDLLEFGS     +       +CCS S +Q+LLLP +   N   FVLS
Subjt:  EEEEEEEIK------SNIILRKMAIDKDK------VEMQ------KISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLS

Query:  SGRWTIHPETESKTIKLPTIDQEFEQYFSVLLP
        SGRW++  ETESK IK PTIDQEFEQYFSVLLP
Subjt:  SGRWTIHPETESKTIKLPTIDQEFEQYFSVLLP

A0A1S3BJU4 uncharacterized protein LOC1034903811.1e-3348.87Show/hide
Query:  MDQNHHQLHHQPSHCDTD---------------RFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQE
        MDQN+   HH PS  DTD               RF GF++WNT   +DVKKKR+LLI++LSL  PT KLPCWG   S S S    E   NFKF K    +
Subjt:  MDQNHHQLHHQPSHCDTD---------------RFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQE

Query:  EEEEEEEIKSNIILRKMAIDKDKVEMQ------KISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETES
         +E E    + I ++   + +++V MQ      + SYG EEDLLEFG+ G+S +       +CCS S +QSLLLP +   N   FVLSSGRW++  ETES
Subjt:  EEEEEEEIKSNIILRKMAIDKDKVEMQ------KISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETES

Query:  KTIKLPTIDQEFEQYFSVLLP
        KT+K PTIDQEFEQYFSVLLP
Subjt:  KTIKLPTIDQEFEQYFSVLLP

A0A6J1CPJ7 uncharacterized protein LOC1110135568.5e-3150.51Show/hide
Query:  QLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAIDK
        Q  H PSH  TD FPGF+ WNT GF DVKKKRKLLIE   LS PTPKLP WG   S S     +    NFKF +N PQ++ EEEE   +   +    I K
Subjt:  QLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAIDK

Query:  DKVEMQK---ISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHP--ETESKTIKLPTIDQEFEQYFSVLL
         +  M+    ISYG  EDLLEFGS           + +C  DS               HDFVLSSGRW + P  E ESKT+K PTIDQEFEQYFSVLL
Subjt:  DKVEMQK---ISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHP--ETESKTIKLPTIDQEFEQYFSVLL

A0A6J1GGJ6 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like1.9e-3853.37Show/hide
Query:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR
        MDQ +H  HH PSH  T  F  F+ W+T  F DVKKKRKLL E+LSL  PTPKLPCWG P S+S SF  Y +D +FKF K  P+E E    ++ +    +
Subjt:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR

Query:  KMAIDKDKVEMQK--------ISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFE
         M+ ++ +++ +K        ++YG EEDLLEFGSHGNSS+         CSDST Q+LLLP   +++NHDFVLSSGRW+I PE ESK I  PTIDQEFE
Subjt:  KMAIDKDKVEMQK--------ISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFE

Query:  QYFSVLLP
        QYFS +LP
Subjt:  QYFSVLLP

A0A6J1IMA5 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like4.5e-4056.44Show/hide
Query:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR
        MDQ +H  HH PSH  T  F GF+ W+T  F DVKKKRKLL E+LSL  PTPKLPCWG P S+S SF  Y +D +FKF K  P+EE E      ++    
Subjt:  MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILR

Query:  KMAIDKDKV-EMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHD-FVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVL
        ++  +KD + +   ++YG EEDLLEFGSHGNSS+       QCCSDST Q+LLLP   +++NHD FVLSSGRW+I PE ESK I  P IDQEFEQYFS +
Subjt:  KMAIDKDKV-EMQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHD-FVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVL

Query:  LP
        LP
Subjt:  LP

SwissProt top hitse value%identityAlignment
Q8S4Q6 Protein FAR-RED ELONGATED HYPOCOTYL 11.0e-0430.77Show/hide
Query:  VDVKKKRKLLI---EELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAIDKDKVEMQKISYGQ--EEDLLEFG
        V+V KKRK      +ELSL  P  K  C+    + +CS            +  +   E + E  + S +         + +EM++ S G   E+ ++ F 
Subjt:  VDVKKKRKLLI---EELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAIDKDKVEMQKISYGQ--EEDLLEFG

Query:  SH-----GNSSLINI---IDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETES-KTIKLPTIDQEFEQYFSVLL
        SH     G  +L +    + E     D   +     K  S+N   FVLSSGRWT++ +  +    K PTIDQEFEQYFS L+
Subjt:  SH-----GNSSLINI---IDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETES-KTIKLPTIDQEFEQYFSVLL

Arabidopsis top hitse value%identityAlignment
AT2G37678.1 far-red elongated hypocotyl 17.2e-0630.77Show/hide
Query:  VDVKKKRKLLI---EELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAIDKDKVEMQKISYGQ--EEDLLEFG
        V+V KKRK      +ELSL  P  K  C+    + +CS            +  +   E + E  + S +         + +EM++ S G   E+ ++ F 
Subjt:  VDVKKKRKLLI---EELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAIDKDKVEMQKISYGQ--EEDLLEFG

Query:  SH-----GNSSLINI---IDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETES-KTIKLPTIDQEFEQYFSVLL
        SH     G  +L +    + E     D   +     K  S+N   FVLSSGRWT++ +  +    K PTIDQEFEQYFS L+
Subjt:  SH-----GNSSLINI---IDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETES-KTIKLPTIDQEFEQYFSVLL

AT5G02200.1 far-red-elongated hypocotyl1-like7.9e-0544.44Show/hide
Query:  KEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVLL
        +E  N    ++LSS RW++  +   +    PTIDQEFEQYFS L+
Subjt:  KEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVLL

AT5G02200.2 far-red-elongated hypocotyl1-like7.9e-0544.44Show/hide
Query:  KEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVLL
        +E  N    ++LSS RW++  +   +    PTIDQEFEQYFS L+
Subjt:  KEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAGAACCATCACCAACTTCATCATCAACCTTCTCACTGTGACACTGACAGGTTCCCTGGGTTTGAAGCATGGAATACAAGAGGATTTGTTGATGTAAAGAAGAA
GAGAAAGCTGCTAATTGAGGAACTAAGCTTATCCACACCCACACCAAAGCTACCATGTTGGGGTCGTCCAAGATCAACAAGCTGTAGCTTTGATCAATATGAAAAAGATC
ATAACTTCAAGTTTAAGAAAAACCACCCTCAAGAAGAAGAAGAAGAAGAAGAAGAAATTAAAAGCAACATTATTCTTAGAAAAATGGCAATAGACAAAGACAAAGTTGAG
ATGCAGAAAATTAGCTATGGGCAGGAGGAAGATCTGTTGGAGTTTGGAAGCCATGGAAATAGCAGCCTAATTAACATTATTGATGAGGGCCAATGTTGCAGTGACAGTAC
TTCTCAAAGCTTGCTTTTGCCCAAGGAGGACTCCAATAATAATCATGACTTTGTTTTGTCATCTGGGAGATGGACCATACATCCAGAGACAGAATCGAAGACTATCAAAT
TACCCACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATAA
mRNA sequenceShow/hide mRNA sequence
AATTCCTCGAATCCAACCTCTTCTTCCCCCACCCTTTCACTTTCTTTTATTTATTTATTTATTTATCAGCACCATCGAAAACAGATGCTCTGTTTGGCTTGACTTTCTGC
GATTTCCATCTCTTTCTTCACCAACAATGGACCAGAACCATCACCAACTTCATCATCAACCTTCTCACTGTGACACTGACAGGTTCCCTGGGTTTGAAGCATGGAATACA
AGAGGATTTGTTGATGTAAAGAAGAAGAGAAAGCTGCTAATTGAGGAACTAAGCTTATCCACACCCACACCAAAGCTACCATGTTGGGGTCGTCCAAGATCAACAAGCTG
TAGCTTTGATCAATATGAAAAAGATCATAACTTCAAGTTTAAGAAAAACCACCCTCAAGAAGAAGAAGAAGAAGAAGAAGAAATTAAAAGCAACATTATTCTTAGAAAAA
TGGCAATAGACAAAGACAAAGTTGAGATGCAGAAAATTAGCTATGGGCAGGAGGAAGATCTGTTGGAGTTTGGAAGCCATGGAAATAGCAGCCTAATTAACATTATTGAT
GAGGGCCAATGTTGCAGTGACAGTACTTCTCAAAGCTTGCTTTTGCCCAAGGAGGACTCCAATAATAATCATGACTTTGTTTTGTCATCTGGGAGATGGACCATACATCC
AGAGACAGAATCGAAGACTATCAAATTACCCACCATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATAATTGGATCCCTGATCTCGAGTCTGTGTGTATT
ACTTTCAAAGGAATTTCACCAAGTTTGCGACAATTCAATTCAAGTCAAGTGATCATGTCTGTGAATGTCAGATCAAGCAAGTGAATATGAGATTCTATTGTACCAAACTA
CTTCTGCAATTCCATTGATTTCAATCTCATTCTTTCCTCCCACGTTTACAAATTTATAAATTAGCTATGTCTCCATTGGCTAGGGACCACATTAATC
Protein sequenceShow/hide protein sequence
MDQNHHQLHHQPSHCDTDRFPGFEAWNTRGFVDVKKKRKLLIEELSLSTPTPKLPCWGRPRSTSCSFDQYEKDHNFKFKKNHPQEEEEEEEEIKSNIILRKMAIDKDKVE
MQKISYGQEEDLLEFGSHGNSSLINIIDEGQCCSDSTSQSLLLPKEDSNNNHDFVLSSGRWTIHPETESKTIKLPTIDQEFEQYFSVLLP