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Tan0013478 (gene) of Snake gourd v1 genome

Gene IDTan0013478
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationLG01:861247..862831
RNA-Seq ExpressionTan0013478
SyntenyTan0013478
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576647.1 hypothetical protein SDJN03_24221, partial [Cucurbita argyrosperma subsp. sororia]8.4e-4290.91Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPT SVASDGE KWEFSCD E+DY SEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+H EAVEARFLRAS+SAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]1.7e-4292.86Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD
        MAPTASVASDGEAKWEF CDFE+DY SEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLRAS+SAFVDVLTLATKTIEDFGQG+D
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD

XP_022945934.1 uncharacterized protein LOC111450028 [Cucurbita moschata]2.2e-4291.92Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASV SDG+AKWEFSCDFE+D  SEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

XP_023553191.1 uncharacterized protein LOC111810678 [Cucurbita pepo subsp. pepo]4.9e-4290.91Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        M PT SVASDGE  WEFSCDFE+DY SEKKASIVY ALVVDKELQPDKVKREMTVSDGKLS+HFEAVEARFLRAS+SAFVDVLTLATKTIEDFGQGVDF
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]1.3e-4290.91Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASVASDGEAKWEFSCDFE+DY SEKKASIVYNAL+VDKELQPDKVKR M+VSDGKLS+HFEAVEARFLRAS+SAFVDVLTLATKT+EDFGQ VDF
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

TrEMBL top hitse value%identityAlignment
A0A1S3CTG0 uncharacterized protein LOC1035041462.2e-4085.86Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        M PTASVASDGEAKWEFSCDFE+DY SEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+HFEAVEARFLRAS+S+FVDVLTLATKTIEDFG  V+F
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

A0A5D3CJ23 EKC/KEOPS complex, subunit Pcc12.2e-4085.86Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        M PTASVASDGEAKWEFSCDFE+DY SEKKASIVYNAL+VDKELQPDKVKR M++S+GKLS+HFEAVEARFLRAS+S+FVDVLTLATKTIEDFG  V+F
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

A0A6J1CHJ5 uncharacterized protein LOC1110115648.2e-4392.86Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD
        MAPTASVASDGEAKWEF CDFE+DY SEKKASIVYNAL VDKELQPDKVKREM VSDGKLSVHFEAVEARFLRAS+SAFVDVLTLATKTIEDFGQG+D
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVD

A0A6J1G2C3 uncharacterized protein LOC1114500281.1e-4291.92Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASV SDG+AKWEFSCDFE+D  SEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

A0A6J1HX84 uncharacterized protein LOC111467483 isoform X27.7e-4189.9Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF
        MAPTASV SDG+AKWEFSCDFE+D  SEKKASIVYNALVVDKELQPDKVKR MTVSDGKLSVHFEAVEARFLRAS SAF+DVLTLA KTIEDFGQG+DF
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein2.5e-2861.05Show/hide
Query:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQ
        MA T    +  +  W+FSC+ ++ + SE+ A I Y +L VDKELQPDKV+R M+VS+ KLSVHFEA+EAR LRAS+SAFVDVLTLAT+TI++FGQ
Subjt:  MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTTGAAATCGATTATGGGTCGGAGAAGAAAGCTTCAATTGTCTATAATGC
TTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGAGAGATGACAGTTTCAGATGGAAAACTTTCAGTACACTTTGAGGCAGTGGAAGCAAGATTTCTGCGTG
CATCATACAGTGCTTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATTGAAGATTTTGGACAAGGAGTGGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
TTCCACTAGAATTGAAGCAATGGCTCCGACAGCTTCCGTCGCTTCTGATGGAGAGGCCAAATGGGAATTCAGCTGTGACTTTGAAATCGATTATGGGTCGGAGAAGAAAG
CTTCAATTGTCTATAATGCTTTAGTCGTCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGAGAGATGACAGTTTCAGATGGAAAACTTTCAGTACACTTTGAGGCAGTG
GAAGCAAGATTTCTGCGTGCATCATACAGTGCTTTTGTAGATGTGCTTACTCTTGCCACAAAAACAATTGAAGATTTTGGACAAGGAGTGGATTTCTGATAGCCTACAAT
TGAAGATTTTGGACAAGGAGTGGATTTCTGATAGCCTACAATTGAAGATTTTGGACAAGGAGTGGATTTCTGATAGCCTCACTGATCTATACATGGTCCTCAAAGATCAA
GTGTCATTTTTTTGCTTAAAGTATTAAATGATATTAAATTATATCTCATCTGTAATTTCATTATAATATGATTTGTAATAGTTTGATCAAGGGTGAAGATCTACATTCTA
CACCCATCATTCGAACATTGAGATCTAACAAGATAACATTTTCAATACACGTATTACACCTTACGTTCAA
Protein sequenceShow/hide protein sequence
MAPTASVASDGEAKWEFSCDFEIDYGSEKKASIVYNALVVDKELQPDKVKREMTVSDGKLSVHFEAVEARFLRASYSAFVDVLTLATKTIEDFGQGVDF