; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013499 (gene) of Snake gourd v1 genome

Gene IDTan0013499
OrganismTrichosanthes anguina (Snake gourd v1)
Description50S ribosomal protein L13, putative
Genome locationLG01:107400774..107403753
RNA-Seq ExpressionTan0013499
SyntenyTan0013499
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0016020 - membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005822 - Ribosomal protein L13
IPR005823 - Ribosomal protein L13, bacterial-type
IPR036899 - Ribosomal protein L13 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607943.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]7.1e-10687.22Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNN + SNR IPR SLVAGFPLPQSKSSFLQTQTTITL SK +SSV QVRAQELDRVPLEQRWMF+GDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

KAG7024651.1 50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-10673.78Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNNG  SNRGIPRKS V GFPLPQSKS  L TQ+ ITL S+S+SS +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGR-------------------------------------------------KSSSNLSPMRFTASDSHTSCPNSSHIL
        AVRGMLPKGR                                                 KSSSN SPM FTASDSH SC N SH+L
Subjt:  AVRGMLPKGR-------------------------------------------------KSSSNLSPMRFTASDSHTSCPNSSHIL

XP_022941245.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]2.4e-10687.67Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNN + SNR IPR SLVAGFPLPQSKSSFLQTQTTITL SK +SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

XP_022981281.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]3.5e-10586.78Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHST NN + SNR IPRKSLVAGFPLPQSKSSFLQTQTTITL SK +SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

XP_023524699.1 50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]3.2e-10687.67Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNNG+ SNR +PR SLVAGFPL QSKSSFLQTQTTITL SK +SSVLQVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

TrEMBL top hitse value%identityAlignment
A0A6J1C1B3 50S ribosomal protein L13, chloroplastic1.2e-10385.9Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATF LHST+NNG+TSNRGIPRKSLVAGFPLP SKSSFLQTQT ITL SK  SSVLQ+RAQELDRVPLEQRWMFEGDELDGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KAADHVNTEK WYVVDATDKILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGGMKVETF+QLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

A0A6J1F6Z3 50S ribosomal protein L13, chloroplastic-like2.7e-10385.46Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNNGS SNRGIPRKS V GFPLPQSKS  L TQTTITL S+S+SS +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

A0A6J1FT16 50S ribosomal protein L13, chloroplastic-like1.2e-10687.67Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHSTLNN + SNR IPR SLVAGFPLPQSKSSFLQTQTTITL SK +SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

A0A6J1IPT4 50S ribosomal protein L13, chloroplastic-like8.8e-10284.58Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSST TF +HSTLNNGS SNRGI RKS V GF LPQSKS  L TQTTITL S+S+SS +QVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

A0A6J1IW42 50S ribosomal protein L13, chloroplastic-like1.7e-10586.78Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP
        MAMLCASSSTATFSLHST NN + SNR IPRKSLVAGFPLPQSKSSFLQTQTTITL SK +SSV QVRAQELDRVPLEQRWMFEGDE+DGPDIWN TWYP
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYP

Query:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH
        KA DHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGM VETFDQLQ+RIPERIIEH
Subjt:  KAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEH

Query:  AVRGMLPKGRKSSSNLSPMRFTASDSH
        AVRGMLPKGR   +  + ++      H
Subjt:  AVRGMLPKGRKSSSNLSPMRFTASDSH

SwissProt top hitse value%identityAlignment
B8HMT1 50S ribosomal protein L131.7e-3860.9Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIP
        NKT+ P      + E  WYVVDAT++ LGRLA+ IA  +RGK  P YTPS+D G FVIVVNAEKVAV+G+KRTQK+YRRHSGRPGGMK ETF +LQ R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIP

Query:  ERIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH
        ERIIEHAV+GMLPK     +  + ++  A   H
Subjt:  ERIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH

P12629 50S ribosomal protein L13, chloroplastic3.5e-6362.74Show/hide
Query:  MLCASS----STATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTW
        M CASS    S  T       N   T     PR ++ A   +   KS+   T+ T   + + + +V +  A  +  VPL+QRWMF  +E  GPDIWN TW
Subjt:  MLCASS----STATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTW

Query:  YPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERII
        YPK+ADHV T+K WYVVDATD ILGR+ASTIA HIRGK+L +YTPSVDMGAFVIVVNA+KVAVSG+KRTQKLYRRHSGRPGG+K ETFDQLQKRIPERII
Subjt:  YPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERII

Query:  EHAVRGMLPKGR
        EHAVRGMLPKGR
Subjt:  EHAVRGMLPKGR

Q3MF94 50S ribosomal protein L135.1e-3860.9Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNAEKVAV+G+KRTQKLYRRHSGRPGGMK ETF +LQ+R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIP

Query:  ERIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH
        ERI+EHAV+GMLPK        + ++  A  +H
Subjt:  ERIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH

Q8YPK6 50S ribosomal protein L131.5e-3760.15Show/hide
Query:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIP
        +KT+ P      + E+ WYVVDATDK LGRLAS IA  +RGK+   YTP +D G FVIVVNA+KVAV+G+KRTQKLYRRHSGRPGGMK ETF +LQ+R+P
Subjt:  NKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIP

Query:  ERIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH
        ERI+EHAV+GMLPK        + ++  A  +H
Subjt:  ERIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH

Q9SYL9 50S ribosomal protein L13, chloroplastic1.2e-6859.48Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L++ S  + G  RKS   GF L    ++  +    + +Y+ S+   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGM VETFDQLQ+RIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPE

Query:  RIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH
        RI+EHAVRGMLPKGR   +  + ++      H
Subjt:  RIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH

Arabidopsis top hitse value%identityAlignment
AT1G78630.1 Ribosomal protein L13 family protein8.8e-7059.48Show/hide
Query:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN
        MA+LC+SS+         L++ S  + G  RKS   GF L    ++  +    + +Y+ S+   LQV+ +         VP  QRWMF+ +E +GPDIWN
Subjt:  MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQ-----ELDRVPLEQRWMFEGDELDGPDIWN

Query:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPE
         TWYPKA+DHVNT+KPW+VVDATDKILGRLASTIANHIRGK+L +YTPSVDMGAFVIVVNAEKVAVSG+KR QKLYRRHSGRPGGM VETFDQLQ+RIPE
Subjt:  KTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPE

Query:  RIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH
        RI+EHAVRGMLPKGR   +  + ++      H
Subjt:  RIIEHAVRGMLPKGRKSSSNLSPMRFTASDSH

AT3G01790.1 Ribosomal protein L13 family protein1.6e-1537.07Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRK
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +K  +      + P  +I  AV  MLP    
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRK

Query:  SSSNLSPMRFTASDSH
               +R      H
Subjt:  SSSNLSPMRFTASDSH

AT3G01790.2 Ribosomal protein L13 family protein1.6e-1537.07Show/hide
Query:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRK
        W V DA  ++LGRLAS I+  ++ KD PTY P+ D G   IV+NA+++  +GRK T K YR H+G  G +K  +      + P  +I  AV  MLP    
Subjt:  WYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRK

Query:  SSSNLSPMRFTASDSH
               +R      H
Subjt:  SSSNLSPMRFTASDSH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACTTTCTCTTTACATTCCACTCTTAACAATGGAAGCACAAGTAACAGAGGCATTCCCAGAAAGTCACTCGTTGCTGG
GTTTCCACTCCCACAATCAAAATCTTCTTTTCTTCAAACCCAGACCACGATTACTCTATACTCCAAGTCGAGGAGTTCGGTTCTTCAAGTGCGAGCTCAGGAGCTGGATC
GTGTCCCTTTAGAACAGCGGTGGATGTTCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGATCATGTGAACACTGAAAAA
CCTTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGCAGACTAGCTTCAACCATTGCCAATCATATCCGAGGGAAGGATCTACCAACCTACACTCCTAGTGTGGATAT
GGGGGCTTTTGTGATCGTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGAAAGTAG
AAACTTTTGACCAGCTACAGAAGAGGATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGAAGAGTTCCTCAAACTTGTCACCAATGAGG
TTTACAGCTTCTGATTCCCATACAAGTTGCCCCAATAGTTCTCACATTCTACAACATAGGATTCTGGAAGCAATGAATTGCTGTATGTGA
mRNA sequenceShow/hide mRNA sequence
TTCCCCCGGTTCCTCATTTTCGCATTCACAAAAAGGCAGTCTTATCCACTATCCATAGCAGAATTTTCCCAACTGAAACAGCGCCAGAGCTACAATGGCGATGCTCTGTG
CTTCCTCCTCTACAGCCACTTTCTCTTTACATTCCACTCTTAACAATGGAAGCACAAGTAACAGAGGCATTCCCAGAAAGTCACTCGTTGCTGGGTTTCCACTCCCACAA
TCAAAATCTTCTTTTCTTCAAACCCAGACCACGATTACTCTATACTCCAAGTCGAGGAGTTCGGTTCTTCAAGTGCGAGCTCAGGAGCTGGATCGTGTCCCTTTAGAACA
GCGGTGGATGTTCGAGGGCGACGAACTCGACGGCCCTGACATATGGAATAAAACATGGTACCCGAAGGCTGCAGATCATGTGAACACTGAAAAACCTTGGTATGTGGTTG
ATGCCACTGATAAGATTTTGGGCAGACTAGCTTCAACCATTGCCAATCATATCCGAGGGAAGGATCTACCAACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATC
GTGGTAAATGCAGAAAAAGTTGCGGTGTCTGGTAGAAAGAGGACACAAAAACTATACAGGAGGCATTCAGGGCGACCAGGTGGTATGAAAGTAGAAACTTTTGACCAGCT
ACAGAAGAGGATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGTATGCTTCCGAAAGGGAGGAAGAGTTCCTCAAACTTGTCACCAATGAGGTTTACAGCTTCTGATT
CCCATACAAGTTGCCCCAATAGTTCTCACATTCTACAACATAGGATTCTGGAAGCAATGAATTGCTGTATGTGACAAATAATAGTGTCTTTCAGTTTACGAGAAGAATCT
CCAATGATAAGAAAATAAGATTTCTGGTGGCCTTTCGAAATGTCTTCAAGAGCTTGGAAGAGCACTCTTTAACCACTTGAAGGTTTACAAAGGACCAGATCATCCACATG
AGGCACAAAAGCCAGTTGATCTGCCAATCAGGGACAAAAGGATAAACAAGGAAAGATAGTATGAACTATGAAGAGAAAACGAATGAGGAAACAAAGCTCTCTTGCCCGTG
GATTCCAATGTTCATAGACTCTGAGATAGAGTTTTCATGCTATATTTGATGTCAGAATTTGATTTGTAATCTGATTCCAAATTCTAGTCTTCGCTGATAACATGCCTAGC
CTAAGTGGCATTTTCCAAGTAATTAATTCAGAAGAGGAAATCTTTTAATCT
Protein sequenceShow/hide protein sequence
MAMLCASSSTATFSLHSTLNNGSTSNRGIPRKSLVAGFPLPQSKSSFLQTQTTITLYSKSRSSVLQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEK
PWYVVDATDKILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGGMKVETFDQLQKRIPERIIEHAVRGMLPKGRKSSSNLSPMR
FTASDSHTSCPNSSHILQHRILEAMNCCM