CuGenDBv2

Gene ID	Tan0013502
Organism	Trichosanthes anguina (Snake gourd v1)
Description	binding partner of ACD11 1
Genome location	LG11:4553845..4557517
RNA-Seq Expression	Tan0013502
Synteny	Tan0013502
Gene Ontology terms	GO:0050832 - defense response to fungus (biological process) GO:0005634 - nucleus (cellular component) GO:0003723 - RNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022134513.1 binding partner of ACD11 1 [Momordica charantia]

7.9e-124

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MY GGYTAEVTSLSPKATE DVYDFFSHCGAVEHVEILRSG+YACTAYVTFRDAF+LETAILLSGAEILDQCVFISRWGTYIDESDT N+PS+ TDDNTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
        LMVT+IMHSVYTPGEAVT+AQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTE IHAGMETVKYIDEK+HVSDITRSAA VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVAV +TGKAAMAAGNA+VNSSYFSKGALWVSDMLSRAA AAA+VG   SKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

XP_022952460.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]

4.2e-125

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGYTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WNNPSQMTD+NTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVSDMLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

XP_022952469.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]

4.2e-125

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGYTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WNNPSQMTD+NTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVSDMLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

XP_022952477.1 binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]

4.2e-125

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGYTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WNNPSQMTD+NTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVSDMLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

XP_023513532.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]

1.1e-125

92.28

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGYTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WNNPSQMTDDNTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVSDMLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C268 binding partner of ACD11 1

3.8e-124

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MY GGYTAEVTSLSPKATE DVYDFFSHCGAVEHVEILRSG+YACTAYVTFRDAF+LETAILLSGAEILDQCVFISRWGTYIDESDT N+PS+ TDDNTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
        LMVT+IMHSVYTPGEAVT+AQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTE IHAGMETVKYIDEK+HVSDITRSAA VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVAV +TGKAAMAAGNA+VNSSYFSKGALWVSDMLSRAA AAA+VG   SKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

A0A6J1GKI7 binding partner of ACD11 1-like isoform X3

2.0e-125

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGYTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WNNPSQMTD+NTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVSDMLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

A0A6J1GLT3 binding partner of ACD11 1-like isoform X2

2.0e-125

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGYTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WNNPSQMTD+NTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVSDMLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

A0A6J1GLU2 binding partner of ACD11 1-like isoform X1

2.0e-125

91.89

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGYTAEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WNNPSQMTD+NTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVSDMLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

A0A6J1JU47 binding partner of ACD11 1-like isoform X1

1.1e-123

90.73

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MYSGGY AEVTSLSPKATENDVYDFFSHCGAV+HVEILRSGDYACTAYVTFRDAF+LETAILLSGAEILDQCVFI RWGTY DES  WN+PSQMT+DNTS
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
         MV EIMHS YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSA+AAAKVSELSNRIGLT+AIH GMETVKYIDEKYHVSDITRS A+VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL
        TAAVVA+GV GKAAMAAG AVVNSSYFSKGALWVS+MLSRA+KAAAEVG +NSKGITKL
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

3.4e-05

26.56

Show/hide

Query:  VTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEIMHS
        VT++SP+ TE  + DFFS CG V ++   +SG+   TA + F    + +TA+LL  A +    + I+          + +  +  T D       +    
Subjt:  VTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEIMHS

Query:  VYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV-SELSNRIGLTEAIHAGMETVKYIDEKYHVSD-ITRSAAVVT
           P  A      ++  +LS+GY L+   L K+   D S  VS+     + S LS    + E  H   E    +D K+ +SD + R++++V+
Subjt:  VYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKV-SELSNRIGLTEAIHAGMETVKYIDEKYHVSD-ITRSAAVVT

Q9LFD5 Binding partner of ACD11 1

1.8e-25

33.86

Show/hide

Query:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI
        + +V +LS  ATE+D+ +FFS  G VE ++I +S ++  +AYVTF++    ETA+LLSGA I DQ V I     Y        +P       T     E 
Subjt:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI

Query:  MHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGM----ETVKYIDEKYHVSDITRSAAVVTGTA
                  V  A+ VV +ML+KG++L KDA+ KAKAFD+    ++TA A V+ L  +IGL++ + AG     E +K +D+ + V++ T+S        
Subjt:  MHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGM----ETVKYIDEKYHVSDITRSAAVVTGTA

Query:  AVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGI
                 +   +AG+AV+ + Y   G  W +   +R A+AA EVG K  + +
Subjt:  AVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGI

Arabidopsis top hits

e value

%identity

Alignment

AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein

7.0e-62

52.4

Show/hide

Query:  GYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVT
        GY  EVT LSP  T ND+ DFFS  G ++ ++I+RSG+ ACTAYV F+D++S ETA+LL+GA ILDQ V I+RWG + +E D WN  S+  +D +     
Subjt:  GYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVT

Query:  EIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTGTAAV
            S +  GEAVT AQ+VVK ML+ G+VL KDAL KAKAFD+S  VSA A A+VS+L  RIGLT+ I  G+E V+  D++YHVSD  +S          
Subjt:  EIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTGTAAV

Query:  VAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSK
         AV  TG+ A AA  +VVNSSYFS GALW+S  L RAAKAA+++G + S+
Subjt:  VAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSK

AT3G01210.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.1e-67

57.83

Show/hide

Query:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS
        MY  GY A+VT+LSP+ATE DV+ FFSHCG VE VEI      A TAYVTFRDA++L+ A+LLSGA I+DQ V+IS +G Y+ ES   NN  Q  +++ S
Subjt:  MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTS

Query:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG
        + VT       +PGEA+TVAQQVV+TML+KGYVL+KDA+ KAKA D+S + S+  A K++E+S+ +GLT+ I + ME V+  DEKYH SD T+SA +VTG
Subjt:  LMVTEIMHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTG

Query:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVG
        TAAV A  +TGK A AA  +VVNS YF+ GALW SD L RAAKAAA +G
Subjt:  TAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVG

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.2e-29

Show/hide

Query:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI
        T +V+++S  AT+ D+ +FFS  G + ++E     +    AYVTF+D    ETA+LLSGA I+D  V +S    Y           Q++ +  + +  + 
Subjt:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI

Query:  MHSVYTPGEAV-TVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGM----ETVKYIDEKYHVSDITRSAAVVTGT
         +     G++V   A+ VV +ML+KG++L KDA+ KAK+ D+  Q+++TA+AKV+    +IG T+ I+ G     E V+ +D+KY VS+ T+S       
Subjt:  MHSVYTPGEAV-TVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGM----ETVKYIDEKYHVSDITRSAAVVTGT

Query:  AAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMK
            A+    +    AG+A++ + Y   GA WV+   ++ AKAA EVG K
Subjt:  AAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMK

AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein

6.4e-31

36.19

Show/hide

Query:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI
        + +V ++S  ATE ++++FFS  G +EH+EI +    +  A+VTF D  +LE A+LLSGA I+DQ V I+R   Y+   +T     +M D+   L + E 
Subjt:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI

Query:  MHSVYTPGEA-----VTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGM----ETVKYIDEKYHVSDITRSAAV
             T  +      V+ AQ VV T+L+KG  L +DA+ KAKAFD+  Q+ A A+AKVS    R+GLTE +  G+    E VK +D+K  VSD T     
Subjt:  MHSVYTPGEA-----VTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGM----ETVKYIDEKYHVSDITRSAAV

Query:  VTGTAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSK
              + A+    +     G+AV +S Y + GA W S   S+ A+     G K  +
Subjt:  VTGTAAVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.3e-31

35.34

Show/hide

Query:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI
        T +V+++S +ATE D+ +FFS  G + ++E     D +  AYVTF+D    ETA+LL+G+ I+D  V ++    Y    D   +   + + N S   T  
Subjt:  TAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEI

Query:  MHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAG----METVKYIDEKYHVSDITRSAAVVTGTA
          SV+        A+ VV  M+SKG+VL KDA+ KAK+ D+  Q+++TA+A+V+    RIG TE I+ G     E VK +D+K+ V++ T+S        
Subjt:  MHSVYTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAG----METVKYIDEKYHVSDITRSAAVVTGTA

Query:  AVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMK
           A+    +    AG+A++ + Y   GA WV+   +R +KAA EVG K
Subjt:  AVVAVGVTGKAAMAAGNAVVNSSYFSKGALWVSDMLSRAAKAAAEVGMK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTACTCTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCCCACTGTGGCGCGGTCGAGCATGTAGAAAT
CCTCAGATCGGGCGATTATGCGTGTACTGCTTATGTGACTTTCCGAGATGCTTTTTCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCCTAGATCAATGTGTGT
TCATATCGCGGTGGGGAACATACATAGATGAATCAGACACTTGGAACAACCCTTCACAAATGACAGACGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTT
TACACACCAGGGGAGGCTGTAACTGTGGCTCAACAAGTTGTGAAAACAATGCTATCAAAGGGATATGTTTTGACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGA
CTCTTGTCAAGTCTCAGCTACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAACAGGATTGGACTCACTGAGGCAATTCATGCTGGCATGGAAACAGTTAAATATATCGACG
AGAAGTATCACGTTTCCGATATCACCAGATCCGCTGCAGTGGTTACTGGAACAGCGGCCGTGGTGGCGGTCGGAGTGACGGGGAAAGCAGCGATGGCAGCGGGTAATGCT
GTAGTAAACAGCAGCTACTTTTCGAAGGGCGCGCTTTGGGTTTCGGATATGTTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGTAGGCATGAAGAACAGTAAAGGAATAAC
AAAACTTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAAAAACATTGTCGGCTAAGTTTTCAGATTTCAGCTCAGCCCCCTCCCCCGGCCCCCTCTCCTCTTCTTCTCTCTGAGCTTCAAACAGGCAGGAGGAGTGGAAGGTGC
TGAAAAGAAAAAGAAAAAGAAAAAAGCTGGATTTTTATGAAGATGAAGTGTTGAGCTAATTGATATTTCAGTCCTCTCTAAATAAGCTGGTGAAAGATTGTTTTTTGTAT
CAATCTTTCCAGGTGTTTACTTCAATTCAAGTTTTCATCTTATAGAGCTCTGTGGAACAATGTACTCTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAAGCC
ACAGAGAATGATGTTTATGATTTTTTCTCCCACTGTGGCGCGGTCGAGCATGTAGAAATCCTCAGATCGGGCGATTATGCGTGTACTGCTTATGTGACTTTCCGAGATGC
TTTTTCTCTGGAAACTGCTATATTGCTTAGTGGGGCTGAAATCCTAGATCAATGTGTGTTCATATCGCGGTGGGGAACATACATAGATGAATCAGACACTTGGAACAACC
CTTCACAAATGACAGACGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTTTACACACCAGGGGAGGCTGTAACTGTGGCTCAACAAGTTGTGAAAACAATG
CTATCAAAGGGATATGTTTTGACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCCAAAGTTTCTGAGCTTAGCAA
CAGGATTGGACTCACTGAGGCAATTCATGCTGGCATGGAAACAGTTAAATATATCGACGAGAAGTATCACGTTTCCGATATCACCAGATCCGCTGCAGTGGTTACTGGAA
CAGCGGCCGTGGTGGCGGTCGGAGTGACGGGGAAAGCAGCGATGGCAGCGGGTAATGCTGTAGTAAACAGCAGCTACTTTTCGAAGGGCGCGCTTTGGGTTTCGGATATG
TTGAGCCGTGCTGCTAAGGCTGCAGCTGAAGTAGGCATGAAGAACAGTAAAGGAATAACAAAACTTTGAATCAAACCAACAAAAATAACTTTCATTGTTTAGCTTCATCA
TGAAAATATAGATATACTCCAAGTTTTTTTTCTTCATGTTGTTTCTCACTCAAATTCAGAATCTTGATGTGCAACTTGGTATGATTATAACTTATAAGTAATCATCCCCA
TACTCGATCTCATTCAAGTGAATGTGGTAGATACATCGTGGAACATTTAAACGATTTGTTCTACTTTAGTATCATGTAAGAAATTTCAATCTCTATGTAAAATTATATAA
ATAGTAGCTGTAAACTACTCAATTGGGTGCAATTTCA

Protein sequence

Show/hide protein sequence

MYSGGYTAEVTSLSPKATENDVYDFFSHCGAVEHVEILRSGDYACTAYVTFRDAFSLETAILLSGAEILDQCVFISRWGTYIDESDTWNNPSQMTDDNTSLMVTEIMHSV
YTPGEAVTVAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVSELSNRIGLTEAIHAGMETVKYIDEKYHVSDITRSAAVVTGTAAVVAVGVTGKAAMAAGNA
VVNSSYFSKGALWVSDMLSRAAKAAAEVGMKNSKGITKL

Tan0013502 (gene) of Snake gourd v1 genome