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Tan0013527 (gene) of Snake gourd v1 genome

Gene IDTan0013527
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:9535986..9536746
RNA-Seq ExpressionTan0013527
SyntenyTan0013527
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031261.1 hypothetical protein E6C27_scaffold139G00140 [Cucumis melo var. makuwa]1.8e-1068Show/hide
Query:  MCMNELAKFRDR-LGASSRRFLPKLRDEATADRREKSIDEATKQSG--AIDD--RKEVILSESTIFLLIDRFIVW
        MCM++LAKFRD  L  SS RFLP L    T DRR+ SI E TKQ+   AIDD   KEVILSESTIFLLIDRFIVW
Subjt:  MCMNELAKFRDR-LGASSRRFLPKLRDEATADRREKSIDEATKQSG--AIDD--RKEVILSESTIFLLIDRFIVW
KAG6572007.1 hypothetical protein SDJN03_28735, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2382.43Show/hide
Query:  MKISPTVEMCMNELAKFRDRLGASSRRFLPKLRDEATADRREKSIDEATKQSGAIDDRKEVILSESTIFLLIDR
        MKISPT++MC++ELAKFRDR   SSRRF PKLRDE+T DRREKSI+EATKQ  AIDDRKEVILSESTIFLLIDR
Subjt:  MKISPTVEMCMNELAKFRDRLGASSRRFLPKLRDEATADRREKSIDEATKQSGAIDDRKEVILSESTIFLLIDR
TrEMBL top hitse value%identityAlignment
A0A0A0K854 Uncharacterized protein4.4e-1566.67Show/hide
Query:  MKISPTVEMCMNELAKFRD-RLGASSRRFLPKLRDEATADRREKSIDEATKQSGAI-----DDRKEVILSESTIFLLIDRFIVW
        MKISPTVEMCMN+LAKFRD  L  SS RFLP +    T DRR+ SI + TKQ+ AI        KEVILSESTIFLLIDRFIVW
Subjt:  MKISPTVEMCMNELAKFRD-RLGASSRRFLPKLRDEATADRREKSIDEATKQSGAI-----DDRKEVILSESTIFLLIDRFIVW
A0A5A7SNR8 Uncharacterized protein8.5e-1168Show/hide
Query:  MCMNELAKFRDR-LGASSRRFLPKLRDEATADRREKSIDEATKQSG--AIDD--RKEVILSESTIFLLIDRFIVW
        MCM++LAKFRD  L  SS RFLP L    T DRR+ SI E TKQ+   AIDD   KEVILSESTIFLLIDRFIVW
Subjt:  MCMNELAKFRDR-LGASSRRFLPKLRDEATADRREKSIDEATKQSG--AIDD--RKEVILSESTIFLLIDRFIVW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATTTCGCCGACGGTGGAGATGTGCATGAACGAGCTCGCCAAGTTCCGAGATCGATTGGGAGCCTCTTCCAGACGCTTCTTGCCGAAGCTCAGAGACGAAGCTAC
AGCGGATCGCCGAGAGAAATCGATCGACGAGGCTACGAAGCAGAGCGGAGCAATCGATGACCGGAAAGAGGTGATTCTTTCCGAATCCACGATTTTCTTGCTTATCGATC
GGTTTATTGTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
CTTGGGCCAAAAAAAAAGACGCAAACCGTGTGCCAAAACAGAACTGTGTGCGCCCAAACACACACAGACTCCCCAAATCTCCGTCTCTTCTCTTAATCTCTCTTCTTATA
AACCCTAATCCAATTCCTCTTTCTCAATAACATCCATTCCATATTCAAATTCTCTCTTCTGTTCGCAATCGTTTCTTTTTTCTTTTTTCTTATGAAGATTTCGCCGACGG
TGGAGATGTGCATGAACGAGCTCGCCAAGTTCCGAGATCGATTGGGAGCCTCTTCCAGACGCTTCTTGCCGAAGCTCAGAGACGAAGCTACAGCGGATCGCCGAGAGAAA
TCGATCGACGAGGCTACGAAGCAGAGCGGAGCAATCGATGACCGGAAAGAGGTGATTCTTTCCGAATCCACGATTTTCTTGCTTATCGATCGGTTTATTGTTTGGTGATG
ATGATCGGGCTGTTGATGAGTTTGTAATGTAAAAATCTGAAGACGTTTTTGTGTACTGTAAATGTTGTTTTTGTGACGAATTGATGTTTGATCTCTCTGGTTTGCTGCCA
TGGATGAGACGATCGACGGTGCAGAAATTGCTTCGATCGTGATGTAGGAGACGAGTAGAATTGCACGATTTTATATCGAACTAACATTTCACCCTAGACTTTAAACAAGA
ATATGGCGAGGTTTCAATTTTATGAAAAATCTCATGTTTAAGGCCTTTTAAATGAGTTAAATGTTCTTTTGTGAAATTACAAGGTTAGCCCTTGAATTTTC
Protein sequenceShow/hide protein sequence
MKISPTVEMCMNELAKFRDRLGASSRRFLPKLRDEATADRREKSIDEATKQSGAIDDRKEVILSESTIFLLIDRFIVW