; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013530 (gene) of Snake gourd v1 genome

Gene IDTan0013530
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionbasic helix-loop-helix protein A
Genome locationLG07:74495304..74495840
RNA-Seq ExpressionTan0013530
SyntenyTan0013530
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR025610 - Transcription factor MYC/MYB N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606426.1 Basic helix-loop-helix protein A, partial [Cucurbita argyrosperma subsp. sororia]7.2e-4372.93Show/hide
Query:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDHRP
        +EG+LQLAVQSVEWTYSLYWRFSTQ R+LVWGDGFYNGPIKTTKT HPAAA          +QQLQLQ      SL RTHQLRDLY+SLS+  ++    P
Subjt:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDHRP

Query:  LPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG
        L RPSAALSPEDLT+SEWFYLLC SFSFPPGLG
Subjt:  LPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG

KAG7036366.1 Basic helix-loop-helix protein A [Cucurbita argyrosperma subsp. argyrosperma]1.9e-4373.13Show/hide
Query:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDHR
        K+EG+LQLAVQSVEWTYSLYWRFSTQ R+LVWGDGFYNGPIKTTKT HPAAA          +QQLQLQ      SL RTHQLRDLY+SLS+  ++    
Subjt:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDHR

Query:  PLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG
        PL RPSAALSPEDLT+SEWFYLLC SFSFPPGLG
Subjt:  PLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG

XP_022931082.1 basic helix-loop-helix protein A [Cucurbita moschata]2.5e-4372.59Show/hide
Query:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDH
        K+EG+LQLAVQSVEWTYSLYWRFSTQ R+LVWGDGFYNGPIKTTKT HPAAA           +QQLQLQ      SL RTHQLRDLY+SLS+  ++   
Subjt:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDH

Query:  RPLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG
         PL RPSAALSPEDLT+SEWFYLLC SFSFPPGLG
Subjt:  RPLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG

XP_022995859.1 basic helix-loop-helix protein A [Cucurbita maxima]3.8e-4475Show/hide
Query:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQPPSLS--RTHQLRDLYHSLSS--TADDHRPL
        +EG+LQLAVQSVEWTYSLYWRFSTQ R+LVWGDGFYNGPIKTTKT HPAAA           +QQLQLQ  SLS  RTHQLRDLY+SLS+  ++    PL
Subjt:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQPPSLS--RTHQLRDLYHSLSS--TADDHRPL

Query:  PRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG
         RPSAALSPEDLT+SEWFYLLCLSFSFPPGLG
Subjt:  PRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG

XP_023533988.1 basic helix-loop-helix protein A [Cucurbita pepo subsp. pepo]8.5e-4473.33Show/hide
Query:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDH
        K+EG+LQLAVQSVEWTYSLYWRFSTQ R+LVWGDGFYNGPIKTTKT HPAAA           +QQLQLQ      SL RTHQLRDLY+SLS+  ++   
Subjt:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDH

Query:  RPLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG
         PL RPSAALSPEDLT+SEWFYLLCLSFSFPPGLG
Subjt:  RPLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG

TrEMBL top hitse value%identityAlignment
A0A0A0KEC0 bHLH-MYC_N domain-containing protein1.6e-4074.38Show/hide
Query:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPP----SLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPED
        +EG+LQ AVQSVEWTYSL+WRFSTQQRMLVWGDGFYNGPIKTTKT HPAAA QQ Q        SL RTHQL DLY+SLS++    RP    SAALSPED
Subjt:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPP----SLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPED

Query:  LTDSEWFYLLCLSFSFPPGLG
        LT++EWFYLLCLSFSFPPG G
Subjt:  LTDSEWFYLLCLSFSFPPGLG

A0A5A7UUX4 Basic helix-loop-helix protein A isoform X22.1e-4073.77Show/hide
Query:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPP-----SLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPE
        +EG+LQ AVQSVEWTYSL+WRFSTQQRMLVWGDGFYNGPIKTTKT HPAAA QQ   Q       SL RTHQL DLY+SLS++    RP    SAALSPE
Subjt:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPP-----SLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPE

Query:  DLTDSEWFYLLCLSFSFPPGLG
        DLT++EWFYLLCLSFSFPPG G
Subjt:  DLTDSEWFYLLCLSFSFPPGLG

A0A5D3CND1 Basic helix-loop-helix protein A isoform X22.1e-4073.77Show/hide
Query:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPP-----SLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPE
        +EG+LQ AVQSVEWTYSL+WRFSTQQRMLVWGDGFYNGPIKTTKT HPAAA QQ   Q       SL RTHQL DLY+SLS++    RP    SAALSPE
Subjt:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPP-----SLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPE

Query:  DLTDSEWFYLLCLSFSFPPGLG
        DLT++EWFYLLCLSFSFPPG G
Subjt:  DLTDSEWFYLLCLSFSFPPGLG

A0A6J1ESI2 basic helix-loop-helix protein A1.2e-4372.59Show/hide
Query:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDH
        K+EG+LQLAVQSVEWTYSLYWRFSTQ R+LVWGDGFYNGPIKTTKT HPAAA           +QQLQLQ      SL RTHQLRDLY+SLS+  ++   
Subjt:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQ----PPSLSRTHQLRDLYHSLSS--TADDH

Query:  RPLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG
         PL RPSAALSPEDLT+SEWFYLLC SFSFPPGLG
Subjt:  RPLPRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG

A0A6J1K736 basic helix-loop-helix protein A1.9e-4475Show/hide
Query:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQPPSLS--RTHQLRDLYHSLSS--TADDHRPL
        +EG+LQLAVQSVEWTYSLYWRFSTQ R+LVWGDGFYNGPIKTTKT HPAAA           +QQLQLQ  SLS  RTHQLRDLY+SLS+  ++    PL
Subjt:  VEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAA-----------EQQLQLQPPSLS--RTHQLRDLYHSLSS--TADDHRPL

Query:  PRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG
         RPSAALSPEDLT+SEWFYLLCLSFSFPPGLG
Subjt:  PRPSAALSPEDLTDSEWFYLLCLSFSFPPGLG

SwissProt top hitse value%identityAlignment
A0A2R6QE26 Transcription factor BHLH425.4e-3358.47Show/hide
Query:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDLTD
        +++GMLQ AVQSV+WTYSL+W+   QQ +LVWGDG+YNG IKT KT  P     ++  +  SL R+ QLR+LY SLS+  + ++   RP AALSPEDLT+
Subjt:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDLTD

Query:  SEWFYLLCLSFSFPPGLG
        SEWFYL+C+SFSFPPG+G
Subjt:  SEWFYLLCLSFSFPPGLG

E3SXU4 Basic helix-loop-helix protein A2.4e-3358.47Show/hide
Query:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDLTD
        K++ MLQ AVQSV+WTYSL+W+   QQ +LVWGDG+YNG IKT KT  P     ++  +  SL R+ QLR+LY SLS+  + + P  RP A+LSPEDLT+
Subjt:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDLTD

Query:  SEWFYLLCLSFSFPPGLG
        SEWFYL+C+SFSFPPG+G
Subjt:  SEWFYLLCLSFSFPPGLG

E3SXU5 Truncated basic helix-loop-helix protein A2.4e-3358.47Show/hide
Query:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDLTD
        K++ MLQ AVQSV+WTYSL+W+   QQ +LVWGDG+YNG IKT KT  P     ++  +  SL R+ QLR+LY SLS+  + + P  RP A+LSPEDLT+
Subjt:  KVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDLTD

Query:  SEWFYLLCLSFSFPPGLG
        SEWFYL+C+SFSFPPG+G
Subjt:  SEWFYLLCLSFSFPPGLG

Q9CAD0 Transcription factor EGL14.0e-2043.31Show/hide
Query:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA
        V   ++  L ++V++++W+Y ++W  S +Q  +L WGDG+YNG IKT KT   A    ++++    L R+ QLR+LY SLS   S+A     + R   +A
Subjt:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA

Query:  ALSPEDLTDSEWFYLLCLSFSFPPGLG
        ALSPEDLTD+EW+YL+C+SF F  G G
Subjt:  ALSPEDLTDSEWFYLLCLSFSFPPGLG

Q9FT81 Transcription factor TT81.2e-2952.5Show/hide
Query:  EKKVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDL
        +K+++G+L+ AVQSV+WTYS++W+F  QQR+LVWG+G+YNG IKT KT  PA    ++  +  +L R+ QLR+LY +L   A +     R   ALSPEDL
Subjt:  EKKVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDL

Query:  TDSEWFYLLCLSFSFPPGLG
        T++EWFYL+C+SFSFPP  G
Subjt:  TDSEWFYLLCLSFSFPPGLG

Arabidopsis top hitse value%identityAlignment
AT1G63650.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.8e-2143.31Show/hide
Query:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA
        V   ++  L ++V++++W+Y ++W  S +Q  +L WGDG+YNG IKT KT   A    ++++    L R+ QLR+LY SLS   S+A     + R   +A
Subjt:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA

Query:  ALSPEDLTDSEWFYLLCLSFSFPPGLG
        ALSPEDLTD+EW+YL+C+SF F  G G
Subjt:  ALSPEDLTDSEWFYLLCLSFSFPPGLG

AT1G63650.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.8e-2143.31Show/hide
Query:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA
        V   ++  L ++V++++W+Y ++W  S +Q  +L WGDG+YNG IKT KT   A    ++++    L R+ QLR+LY SLS   S+A     + R   +A
Subjt:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA

Query:  ALSPEDLTDSEWFYLLCLSFSFPPGLG
        ALSPEDLTD+EW+YL+C+SF F  G G
Subjt:  ALSPEDLTDSEWFYLLCLSFSFPPGLG

AT1G63650.3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.8e-2143.31Show/hide
Query:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA
        V   ++  L ++V++++W+Y ++W  S +Q  +L WGDG+YNG IKT KT   A    ++++    L R+ QLR+LY SLS   S+A     + R   +A
Subjt:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLS---STADDHRPLPR--PSA

Query:  ALSPEDLTDSEWFYLLCLSFSFPPGLG
        ALSPEDLTD+EW+YL+C+SF F  G G
Subjt:  ALSPEDLTDSEWFYLLCLSFSFPPGLG

AT4G09820.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.8e-3152.5Show/hide
Query:  EKKVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDL
        +K+++G+L+ AVQSV+WTYS++W+F  QQR+LVWG+G+YNG IKT KT  PA    ++  +  +L R+ QLR+LY +L   A +     R   ALSPEDL
Subjt:  EKKVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDL

Query:  TDSEWFYLLCLSFSFPPGLG
        T++EWFYL+C+SFSFPP  G
Subjt:  TDSEWFYLLCLSFSFPPGLG

AT5G41315.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.7e-1838.46Show/hide
Query:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPS------
        V + ++  L ++V++++W+Y ++W  S +Q  +L WGDG+YNG IKT KT        +++     L R+ QL +LY SLS        +   S      
Subjt:  VEKKVEGMLQLAVQSVEWTYSLYWRFS-TQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPS------

Query:  --AALSPEDLTDSEWFYLLCLSFSFPPGLG
          AALSPEDL D+EW+YL+C+SF F  G G
Subjt:  --AALSPEDLTDSEWFYLLCLSFSFPPGLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGAAAAAAAAGTAGAAGGCATGTTGCAGTTGGCGGTGCAATCCGTTGAGTGGACTTACTCTCTCTACTGGCGCTTCTCCACTCAACAACGGATGCTGGTTTG
GGGAGATGGGTTTTACAATGGACCTATCAAGACCACCAAGACGCAGCACCCTGCCGCCGCGGAACAACAACTACAACTACAACCACCCTCTCTGTCGAGAACCCACCAGC
TGAGGGATCTCTACCACTCCTTATCCTCCACCGCCGACGACCACCGGCCTCTCCCCCGCCCCTCCGCCGCCCTTTCTCCCGAGGACTTGACGGACTCCGAGTGGTTCTAT
TTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGACTTGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGGAAAAAAAAGTAGAAGGCATGTTGCAGTTGGCGGTGCAATCCGTTGAGTGGACTTACTCTCTCTACTGGCGCTTCTCCACTCAACAACGGATGCTGGTTTG
GGGAGATGGGTTTTACAATGGACCTATCAAGACCACCAAGACGCAGCACCCTGCCGCCGCGGAACAACAACTACAACTACAACCACCCTCTCTGTCGAGAACCCACCAGC
TGAGGGATCTCTACCACTCCTTATCCTCCACCGCCGACGACCACCGGCCTCTCCCCCGCCCCTCCGCCGCCCTTTCTCCCGAGGACTTGACGGACTCCGAGTGGTTCTAT
TTGTTGTGTCTCTCTTTCTCTTTTCCTCCGGGACTTGGGTAA
Protein sequenceShow/hide protein sequence
MKVEKKVEGMLQLAVQSVEWTYSLYWRFSTQQRMLVWGDGFYNGPIKTTKTQHPAAAEQQLQLQPPSLSRTHQLRDLYHSLSSTADDHRPLPRPSAALSPEDLTDSEWFY
LLCLSFSFPPGLG