; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013560 (gene) of Snake gourd v1 genome

Gene IDTan0013560
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncold shock domain-containing protein 3-like
Genome locationLG01:27714400..27715831
RNA-Seq ExpressionTan0013560
SyntenyTan0013560
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577777.1 Cold shock protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.6e-9696.43Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNFGGGGGRGGR GGGGGGY
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG
        GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR GGGGGGGGCFTCGEVGHLARDCPRG+SGGGGAGGGACY CGGFGHLARDCNRGG
Subjt:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG

XP_004146143.1 cold shock domain-containing protein 3 [Cucumis sativus]1.4e-9593.53Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF-GGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNF GGGGGRGGRGGGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF-GGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS----GGGGAGGGACYTCGGFGHLARDCNRG
        YGFGGWRGGDRRNG+SGAGGGGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRG+S    GGGG GGGACY CGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS----GGGGAGGGACYTCGGFGHLARDCNRG

Query:  G
        G
Subjt:  G

XP_022965328.1 cold shock domain-containing protein 3-like [Cucurbita maxima]1.3e-9696.43Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNFGGGGGRGGR GGGGGGY
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG
        GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRG+S GGGAGGGACY CGGFGHLARDCNRGG
Subjt:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG

XP_023551806.1 cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo]6.3e-9695.45Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNFGGGGGRGGR GGGGGGY
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS--GGGGAGGGACYTCGGFGHLARDCNRGG
        GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGG GGGGGGCFTCGEVGHLARDCPRG+S  GGGGAGGGACY CGGFGHLARDCNRGG
Subjt:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS--GGGGAGGGACYTCGGFGHLARDCNRGG

XP_038876618.1 cold shock domain-containing protein 3 [Benincasa hispida]3.7e-9693.5Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGG----GACYTCGGFGHLARDCNRGG
        GFGGWRGGDRRNG+SGAGGG CYQCGEQGHLARDCTRASNR GGGGGGGGCFTCGEVGHLARDCPRG+SGGGG GG    GACY CGGFGHLARDCNRGG
Subjt:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGG----GACYTCGGFGHLARDCNRGG

TrEMBL top hitse value%identityAlignment
A0A0A0L4X7 Uncharacterized protein6.7e-9693.53Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF-GGGGGRGGRGGGGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNF GGGGGRGGRGGGGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF-GGGGGRGGRGGGGGGG

Query:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS----GGGGAGGGACYTCGGFGHLARDCNRG
        YGFGGWRGGDRRNG+SGAGGGGCYQCGEQGHLARDCTR SNRGGGGGGGGGCFTCGEVGHLARDCPRG+S    GGGG GGGACY CGGFGHLARDCNRG
Subjt:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS----GGGGAGGGACYTCGGFGHLARDCNRG

Query:  G
        G
Subjt:  G

A0A5D3CJR2 Cold shock domain-containing protein 36.3e-9491.67Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF----GGGGGRGGRGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNF    GGGGGRGGRGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF----GGGGGRGGRGGGG

Query:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGSS---GGGGAGGGACYTCGGFGHLARDC
        GGGYGFGGWRGGDRRNG+SG GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRG+S   GGGG+GGGACY CGGFGHLARDC
Subjt:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGSS---GGGGAGGGACYTCGGFGHLARDC

Query:  NRGG
        NRGG
Subjt:  NRGG

A0A6J1E5N5 cold shock domain-containing protein 3-like3.3e-9594.97Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNFGGGGGRGGR GGGGGGY
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS---GGGGAGGGACYTCGGFGHLARDCNRGG
        GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR GGGGGGGGCFTCGEVGHLARDCPRG+S   GGGGAGGGACY CGGFGHLARDCNRGG
Subjt:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSS---GGGGAGGGACYTCGGFGHLARDCNRGG

A0A6J1HNK3 cold shock domain-containing protein 3-like6.1e-9796.43Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNFGGGGGRGGR GGGGGGY
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY

Query:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG
        GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRG+S GGGAGGGACY CGGFGHLARDCNRGG
Subjt:  GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG

E5RDD6 Cold-shock DNA-binding family protein6.3e-9491.67Show/hide
Query:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF----GGGGGRGGRGGGG
        MAEERLTGVVQWFNDSKGFGFIKPDVEG DLFVHQSSIKSDGYRSLVVGDHVE+QIAPGDDGK KAIEVVALDGSSGNRRDNF    GGGGGRGGRGGGG
Subjt:  MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNF----GGGGGRGGRGGGG

Query:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGSS---GGGGAGGGACYTCGGFGHLARDC
        GGGYGFGGWRGGDRRNG+SG GGGGCYQCGEQGHLARDCTR SNR GGGGGGGGGCFTCGEVGHLARDCPRG+S   GGGG+GGGACY CGGFGHLARDC
Subjt:  GGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASNR-GGGGGGGGGCFTCGEVGHLARDCPRGSS---GGGGAGGGACYTCGGFGHLARDC

Query:  NRGG
        NRGG
Subjt:  NRGG

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 11.9e-3951.66Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY----
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VE+ I  G DGK KA+ V A  G S  + +N  G G R  RGGGG G Y    
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY----

Query:  --------GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGG------AGGGACYTCG
                G GG  GG  R      GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC + S G G        G   CYTCG
Subjt:  --------GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGG------AGGGACYTCG

Query:  GFGHLARDCNR
          GH ARDC +
Subjt:  GFGHLARDCNR

P27484 Glycine-rich protein 22.3e-3752.34Show/hide
Query:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSS-GNRRDNFGGGGGRGGRG-GG
        MAEE   R  G V+WF+D KGFGFI PD  G DLFVHQS I+S+G+RSL  G+ VE+++  G DG+ KA++V   DG++    R   GGGGGRGG G GG
Subjt:  MAEE---RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSS-GNRRDNFGGGGGRGGRG-GG

Query:  GGGGYGFGGWRGGDR--RNGSSGAGGGGCYQCGEQ--GHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCP---------RGSSGGGGAGGGACYTC
        G GGYG GG RGG R    G  G GGGG Y  G +  G            GGG GGG GCF CGE GH ARDC          R   GGGG GGG CY C
Subjt:  GGGGYGFGGWRGGDR--RNGSSGAGGGGCYQCGEQ--GHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCP---------RGSSGGGGAGGGACYTC

Query:  GGFGHLARDCNRGG
        G  GH AR+C  GG
Subjt:  GGFGHLARDCNRGG

Q38896 Cold shock domain-containing protein 47.3e-3149.5Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGG-GGGRGGRGGGG--GGGY
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VE+ +   + G+ KAIEV   DG+        GG  GGRGG GGGG  GGG 
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGG-GGGRGGRGGGG--GGGY

Query:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG
        G G + GG    GS G GGGG    C++CGE GH+AR+C++    GG  GGGGG    G  G        G  GGGG GG +CY+CG  GH ARDC  GG
Subjt:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG

Q41188 Cold shock protein 21.2e-3349Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGR----GGRGGGGGGG
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VE+++   ++ + KAI+V   DG+        G  GGR    GGRGGG G G
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGR----GGRGGGGGGG

Query:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG
         G+GG  GG    G  G GG  CY+CGE GH+ARDC+        GGGG GGGG +  G  G+       G   GGG GGG+CY+CG  GH ARDC  GG
Subjt:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG

Q94C69 Cold shock domain-containing protein 31.2e-4153.77Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRG----GRGG------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VEY+IA G DGK KAIEV A  G S N+++N   G G      G  G      
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRG----GRGG------

Query:  -GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGS-------SGGGGAGGGACYTCGG
         GG GG  FGG  GG RR+G    G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC  GS        GG G+GG  CY CGG
Subjt:  -GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGS-------SGGGGAGGGACYTCGG

Query:  FGHLARDCNRGG
         GH ARDC + G
Subjt:  FGHLARDCNRGG

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 38.5e-4353.77Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRG----GRGG------
        R  G V WF+D KG+GFI PD  G +LFVHQSSI SDG+RSL +G+ VEY+IA G DGK KAIEV A  G S N+++N   G G      G  G      
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRG----GRGG------

Query:  -GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGS-------SGGGGAGGGACYTCGG
         GG GG  FGG  GG RR+G    G G CY CG+ GH ARDC ++   N GGGGGGG  C++CGEVGHLA+DC  GS        GG G+GG  CY CGG
Subjt:  -GGGGGYGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRA--SNRGGGGGGGGGCFTCGEVGHLARDCPRGS-------SGGGGAGGGACYTCGG

Query:  FGHLARDCNRGG
         GH ARDC + G
Subjt:  FGHLARDCNRGG

AT2G21060.1 glycine-rich protein 2B5.2e-3249.5Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGG-GGGRGGRGGGG--GGGY
        +R  G V+WF+  KGFGFI P   G DLFVHQSSI+S+G+RSL   + VE+ +   + G+ KAIEV   DG+        GG  GGRGG GGGG  GGG 
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGG-GGGRGGRGGGG--GGGY

Query:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG
        G G + GG    GS G GGGG    C++CGE GH+AR+C++    GG  GGGGG    G  G        G  GGGG GG +CY+CG  GH ARDC  GG
Subjt:  GFGGWRGGDRRNGSSGAGGGG----CYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG

AT4G36020.1 cold shock domain protein 11.4e-4051.66Show/hide
Query:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY----
        R TG V WFN SKG+GFI PD    +LFVHQSSI S+GYRSL VGD VE+ I  G DGK KA+ V A  G S  + +N  G G R  RGGGG G Y    
Subjt:  RLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGY----

Query:  --------GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGG------AGGGACYTCG
                G GG  GG  R      GG GCY CG+ GH ARDCT A N   RG   GG  GC+TCG+VGH+ARDC + S G G        G   CYTCG
Subjt:  --------GFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRASN---RGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGG------AGGGACYTCG

Query:  GFGHLARDCNR
          GH ARDC +
Subjt:  GFGHLARDCNR

AT4G38680.1 glycine rich protein 28.6e-3549Show/hide
Query:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGR----GGRGGGGGGG
        ER  G V+WF+  KGFGFI PD  G DLFVHQSSI+S+G+RSL   + VE+++   ++ + KAI+V   DG+        G  GGR    GGRGGG G G
Subjt:  ERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGR----GGRGGGGGGG

Query:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG
         G+GG  GG    G  G GG  CY+CGE GH+ARDC+        GGGG GGGG +  G  G+       G   GGG GGG+CY+CG  GH ARDC  GG
Subjt:  YGFGGWRGGDRRNGSSGAGGGGCYQCGEQGHLARDCTRAS---NRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAGAGAGATTGACTGGTGTGGTTCAGTGGTTCAACGATTCGAAAGGATTCGGCTTCATCAAGCCAGATGTAGAAGGTGCGGATCTGTTTGTTCATCAATCCTC
CATTAAATCCGATGGTTACCGGAGCCTTGTCGTCGGAGATCATGTCGAGTATCAGATCGCTCCGGGTGATGATGGGAAATTGAAAGCTATTGAGGTCGTTGCGCTCGATG
GATCTTCGGGAAATCGTAGGGATAACTTCGGTGGAGGTGGTGGAAGGGGTGGCCGCGGCGGCGGCGGTGGTGGGGGTTATGGGTTCGGTGGCTGGAGGGGAGGCGATAGG
CGGAATGGGAGCAGTGGAGCCGGTGGGGGTGGGTGTTATCAATGCGGTGAGCAAGGGCATTTAGCTAGAGACTGTACTCGTGCTAGCAACCGCGGCGGCGGCGGCGGTGG
AGGTGGTGGGTGTTTTACTTGCGGTGAAGTTGGCCACTTAGCGAGGGATTGCCCACGAGGAAGCAGCGGCGGTGGCGGCGCCGGTGGTGGGGCTTGCTATACTTGTGGTG
GGTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGGATGTTTTTGTGCACTCTGCTCTGTCTTGTTGACCCATTTAGCACTCTGTTCTGCTATAAAATCTGTTGTGGA
AGTGTTTTAGAAGCTGTTGGATTTGTTCGTTTCTATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAAGAGAGATTGACTGGTGTGGTTCAGTGGTTCAACGATTCGAAAGGATTCGGCTTCATCAAGCCAGATGTAGAAGGTGCGGATCTGTTTGTTCATCAATCCTC
CATTAAATCCGATGGTTACCGGAGCCTTGTCGTCGGAGATCATGTCGAGTATCAGATCGCTCCGGGTGATGATGGGAAATTGAAAGCTATTGAGGTCGTTGCGCTCGATG
GATCTTCGGGAAATCGTAGGGATAACTTCGGTGGAGGTGGTGGAAGGGGTGGCCGCGGCGGCGGCGGTGGTGGGGGTTATGGGTTCGGTGGCTGGAGGGGAGGCGATAGG
CGGAATGGGAGCAGTGGAGCCGGTGGGGGTGGGTGTTATCAATGCGGTGAGCAAGGGCATTTAGCTAGAGACTGTACTCGTGCTAGCAACCGCGGCGGCGGCGGCGGTGG
AGGTGGTGGGTGTTTTACTTGCGGTGAAGTTGGCCACTTAGCGAGGGATTGCCCACGAGGAAGCAGCGGCGGTGGCGGCGCCGGTGGTGGGGCTTGCTATACTTGTGGTG
GGTTTGGGCATTTGGCTAGGGATTGCAATAGGGGTGGGATGTTTTTGTGCACTCTGCTCTGTCTTGTTGACCCATTTAGCACTCTGTTCTGCTATAAAATCTGTTGTGGA
AGTGTTTTAGAAGCTGTTGGATTTGTTCGTTTCTATGATTGA
Protein sequenceShow/hide protein sequence
MAEERLTGVVQWFNDSKGFGFIKPDVEGADLFVHQSSIKSDGYRSLVVGDHVEYQIAPGDDGKLKAIEVVALDGSSGNRRDNFGGGGGRGGRGGGGGGGYGFGGWRGGDR
RNGSSGAGGGGCYQCGEQGHLARDCTRASNRGGGGGGGGGCFTCGEVGHLARDCPRGSSGGGGAGGGACYTCGGFGHLARDCNRGGMFLCTLLCLVDPFSTLFCYKICCG
SVLEAVGFVRFYD