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Tan0013575 (gene) of Snake gourd v1 genome

Gene IDTan0013575
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzinc finger protein 6-like
Genome locationLG06:5837611..5838135
RNA-Seq ExpressionTan0013575
SyntenyTan0013575
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046676.1 zinc finger protein 6-like [Cucumis melo var. makuwa]1.1e-6576.47Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS
        MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRPP LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS

Query:  SVFPGNI-------GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS
        SVFP N        G GGSR LPR GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHLKLSPS S
Subjt:  SVFPGNI-------GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS

KAG7025578.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-7079.23Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAA-------ALRPP
        MSNQNPSSILKLFGFPLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AA       ALRPP
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAA-------ALRPP

Query:  PLYSSVFPGNIGSG--GSRFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG
        P YSSVFP NIG G  G RFLPR  NGYFTAA+GGVSA SGRWMFGN GE          GGEKGSTD VGV+DLHLKLSPSG
Subjt:  PLYSSVFPGNIGSG--GSRFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG

XP_008451655.1 PREDICTED: zinc finger protein 6-like [Cucumis melo]5.0e-6677.72Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS
        MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRPP LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS

Query:  SVFPGNI----GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS
        SVFP N     G GGSR LPR GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHLKLSPS S
Subjt:  SVFPGNI----GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS

XP_023004876.1 zinc finger protein GIS3-like [Cucurbita maxima]5.7e-7079.21Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVF
        MSNQNPS+ILKLFGFPLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRPPP YSSVF
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVF

Query:  PGNIGSGGS----RFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG
        P +IG GG     RFLPR  +GYFTAA+GGVSA SGRWMFGN GE          GGEKGSTD V V+DLHLKLSPSG
Subjt:  PGNIGSGGS----RFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG

XP_023514545.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]1.7e-6979.21Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVF
        MSNQNPSSILKLFG PLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRP P YSSVF
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVF

Query:  PGNIGSGGS----RFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG
        P NIG GG     RF+PR  NGYFTAA+GGVS  SGRWMFGN GE          GGEKGSTD VGV+DLHLKLSPSG
Subjt:  PGNIGSGGS----RFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5R1 C2H2-type domain-containing protein1.4e-6175.82Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTDG-GGADTN-SDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSV
        MSN NPSSILKLFGFPLVEHDD PPET DG GGADT  S++DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRPP LYSSV
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTDG-GGADTN-SDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSV

Query:  FPGNIG--SGGSRFLPR--CGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS
        FP NIG   G SR L R    NGYF  TAA+GGVSA+SGRWMFGN  EG +E SGCKLGGEKG       +DLHLKLSPS S
Subjt:  FPGNIG--SGGSRFLPR--CGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS

A0A1S3BSU1 zinc finger protein 6-like2.4e-6677.72Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS
        MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRPP LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS

Query:  SVFPGNI----GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS
        SVFP N     G GGSR LPR GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHLKLSPS S
Subjt:  SVFPGNI----GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS

A0A5D3D1T3 Zinc finger protein 6-like5.4e-6676.47Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS
        MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH      AAALRPP LYS
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYS

Query:  SVFPGNI-------GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS
        SVFP N        G GGSR LPR GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHLKLSPS S
Subjt:  SVFPGNI-------GSGGSRFLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS

A0A6J1JX90 zinc finger protein 6-like6.4e-5972.46Show/hide
Query:  NPSSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIG
        N  SILKLFGFPLVEH+ + PET +G G D NSD+DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFH        ALRPPPLY++V+P NIG
Subjt:  NPSSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIG

Query:  SGG-SRFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLS
        S G SR LPR  N YFTAA+GGVSA+SGRWMF     GK+E SGCKL GEKG  +HVG +DLHLKL+
Subjt:  SGG-SRFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLS

A0A6J1KTC7 zinc finger protein GIS3-like2.8e-7079.21Show/hide
Query:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVF
        MSNQNPS+ILKLFGFPLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALGGHQNAHKRERQRAKRALYFHASDH  AAALRPPP YSSVF
Subjt:  MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVF

Query:  PGNIGSGGS----RFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG
        P +IG GG     RFLPR  +GYFTAA+GGVSA SGRWMFGN GE          GGEKGSTD V V+DLHLKLSPSG
Subjt:  PGNIGSGGS----RFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 54.5e-0944.16Show/hide
Query:  SNQNPSSILKLFGFPLVEHDDLPPETT-DGGGADTNSDE---DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P  TT +   + TN+      ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNQNPSSILKLFGFPLVEHDDLPPETT-DGGGADTNSDE---DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

Q39265 Zinc finger protein 64.3e-1252.17Show/hide
Query:  SSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +S LKLFG  L+E   +  ++++      +  E RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

Q84WI0 Zinc finger protein GIS5.0e-0836.54Show/hide
Query:  EHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRFLPRCGN
        E ++   +T D    + +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  YF+  D+   +    P   +         GG    P+  +
Subjt:  EHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRFLPRCGN

Query:  GYFT
        GY+T
Subjt:  GYFT

Q9C9H1 Zinc finger protein GIS35.3e-1032.97Show/hide
Query:  GGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL----------YFHASD------HRFAAALRPPP--LYSSVFPGNIGSGGSRFL
        GGG       +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA           + +A        +   +A  PPP  L SS  P  +G G   +L
Subjt:  GGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL----------YFHASD------HRFAAALRPPP--LYSSVFPGNIGSGGSRFL

Query:  PRCGNGYFTAAH--------GGVSAASGRWMFGNPGEG---------KIEISGCK-----LGGEKGSTDHVGV-IDLHLKLSPSG
        PR        +H        GG  A    + +G    G          ++  G +        E G+T   G+ +DLHL L+P+G
Subjt:  PRCGNGYFTAAH--------GGVSAASGRWMFGNPGEG---------KIEISGCK-----LGGEKGSTDHVGV-IDLHLKLSPSG

Q9FG05 Zinc finger protein GIS21.0e-0839.56Show/hide
Query:  LKLFGFPL-VEHDDLPPETTDGGGADTNS----DEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA
        ++LFGF     H++   E+ D    +  S    +++++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH   +  AA+
Subjt:  LKLFGFPL-VEHDDLPPETTDGGGADTNS----DEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 53.2e-1044.16Show/hide
Query:  SNQNPSSILKLFGFPLVEHDDLPPETT-DGGGADTNSDE---DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR
        S  +    +KLFGF L+     P  TT +   + TN+      ++  CQ+C + FANSQALGGHQNAHK+ER + KR
Subjt:  SNQNPSSILKLFGFPLVEHDDLPPETT-DGGGADTNSDE---DRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR

AT1G67030.1 zinc finger protein 63.1e-1352.17Show/hide
Query:  SSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA
        +S LKLFG  L+E   +  ++++      +  E RK+ CQ+C R FANSQALGGHQNAHK+ERQ  KRA
Subjt:  SSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRA

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein3.8e-1132.97Show/hide
Query:  GGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL----------YFHASD------HRFAAALRPPP--LYSSVFPGNIGSGGSRFL
        GGG       +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA           + +A        +   +A  PPP  L SS  P  +G G   +L
Subjt:  GGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL----------YFHASD------HRFAAALRPPP--LYSSVFPGNIGSGGSRFL

Query:  PRCGNGYFTAAH--------GGVSAASGRWMFGNPGEG---------KIEISGCK-----LGGEKGSTDHVGV-IDLHLKLSPSG
        PR        +H        GG  A    + +G    G          ++  G +        E G+T   G+ +DLHL L+P+G
Subjt:  PRCGNGYFTAAH--------GGVSAASGRWMFGNPGEG---------KIEISGCK-----LGGEKGSTDHVGV-IDLHLKLSPSG

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein3.5e-0936.54Show/hide
Query:  EHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRFLPRCGN
        E ++   +T D    + +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  YF+  D+   +    P   +         GG    P+  +
Subjt:  EHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL--YFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRFLPRCGN

Query:  GYFT
        GY+T
Subjt:  GYFT

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein7.1e-1039.56Show/hide
Query:  LKLFGFPL-VEHDDLPPETTDGGGADTNS----DEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA
        ++LFGF     H++   E+ D    +  S    +++++F+C +C R F  SQALGGHQNAHKRERQ+ KR       A +FH   +  AA+
Subjt:  LKLFGFPL-VEHDDLPPETTDGGGADTNS----DEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKR-------ALYFHASDHRFAAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTCTTCGGGTTCCCGCTAGTCGAACACGACGACCTTCCGCCGGAGACTACTGACGGCGGCGGCGCCGACACCAACTC
CGACGAAGACAGGAAATTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAAC
GCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGCCGCCACTTTACTCCAGCGTTTTTCCGGGCAACATTGGCAGCGGTGGTTCTAGATTT
CTGCCTCGGTGCGGTAACGGTTACTTTACGGCGGCGCACGGCGGCGTATCGGCGGCCTCAGGGCGGTGGATGTTTGGGAATCCGGGAGAAGGGAAAATAGAAATTTCAGG
GTGTAAATTGGGAGGTGAAAAGGGATCAACGGATCATGTGGGTGTCATTGATCTTCATCTTAAACTTTCTCCTTCTGGTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTCTTCGGGTTCCCGCTAGTCGAACACGACGACCTTCCGCCGGAGACTACTGACGGCGGCGGCGCCGACACCAACTC
CGACGAAGACAGGAAATTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAAC
GCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGCCGCCACTTTACTCCAGCGTTTTTCCGGGCAACATTGGCAGCGGTGGTTCTAGATTT
CTGCCTCGGTGCGGTAACGGTTACTTTACGGCGGCGCACGGCGGCGTATCGGCGGCCTCAGGGCGGTGGATGTTTGGGAATCCGGGAGAAGGGAAAATAGAAATTTCAGG
GTGTAAATTGGGAGGTGAAAAGGGATCAACGGATCATGTGGGTGTCATTGATCTTCATCTTAAACTTTCTCCTTCTGGTTCATGA
Protein sequenceShow/hide protein sequence
MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRF
LPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS