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Tan0013582 (gene) of Snake gourd v1 genome

Gene IDTan0013582
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationLG03:78340959..78342933
RNA-Seq ExpressionTan0013582
SyntenyTan0013582
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594594.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5682.76Show/hide
Query:  MANSRDQGWGDTVEEDEEEE------DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQR
        M +S DQGWG+ VEE+EEEE      DDDEIGFV+DERKKR A SGSR+GSGGGR++V RCQADSCN DL+GARAYHRRHKVCEFH+KAAVVILAGLEQR
Subjt:  MANSRDQGWGDTVEEDEEEE------DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQR

Query:  FCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        FCQQCSRFHSVSEFDETKRSCR RLAGHNERRRK+LP+FQGQSST
Subjt:  FCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-5683.33Show/hide
Query:  MANSRDQGWGDTVEEDEEEE-----DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRF
        M +S DQGWG+ VEE+EEEE     DDDEIGFV+DERKKR A SGSR+GSGGGR++V RCQADSCN DL+GARAYHRRHKVCEFH+KAAVVILAGLEQRF
Subjt:  MANSRDQGWGDTVEEDEEEE-----DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRF

Query:  CQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        CQQCSRFHSVSEFDETKRSCR RLAGHNERRRK+LP+FQGQSST
Subjt:  CQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

XP_022926740.1 squamosa promoter-binding-like protein 3 [Cucurbita moschata]2.2e-5683.33Show/hide
Query:  MANSRDQGWGDTVEEDEEEE-----DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRF
        M +S DQGWG+ VEE+EEEE     DDDEIGFV+DERKKR A SGSR+GSGGGR++V RCQADSCN DL+GARAYHRRHKVCEFH+KAAVVILAGLEQRF
Subjt:  MANSRDQGWGDTVEEDEEEE-----DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRF

Query:  CQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        CQQCSRFHSVSEFDETKRSCR RLAGHNERRRK+LP+FQGQSST
Subjt:  CQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]2.4e-5886.62Show/hide
Query:  MANSRDQGWGDTVEEDEEEE---DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS DQGWGD VEE+EEEE   DDDE+GFVEDERKKR AVS SR+GSGGGR++VARCQADSCN DL+GARAYHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSRDQGWGDTVEEDEEEE---DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        QCSRFHSVSEFDETKRSCR RLAGHNERRRK+LP+FQGQSST
Subjt:  QCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

XP_023518277.1 squamosa promoter-binding-like protein 3 [Cucurbita pepo subsp. pepo]1.4e-5584.4Show/hide
Query:  MANSRDQGWGDTVEEDEE--EEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M +S DQGWGD VEE+EE  E+DDDEIGFV+DERKKR AVSGSR+G GGGR++VARCQADSCN DL+GARAYHRRHKVCEFH+KAAVVILAGLEQRFCQQ
Subjt:  MANSRDQGWGDTVEEDEE--EEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
          RFHSVSEFDETKRSCR RLAGHNERRRK+LP+FQGQSST
Subjt:  CSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein6.7e-5173.57Show/hide
Query:  MANSRDQGWGD-TVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQC
        MANS DQGW D  V++D+++ D++EIGFV++ER++R  ++ +R G GGGRSTVARCQAD CNADL+GA+ YHRRHKVCEFH++AAVVILAGLEQRFCQQC
Subjt:  MANSRDQGWGD-TVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQC

Query:  SRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        SRFH++SEFD+TKRSCR RLAGHNERRRK LP+F GQSST
Subjt:  SRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

A0A1S3AZN8 squamosa promoter-binding protein 15.1e-5174.47Show/hide
Query:  MANSRDQGWGDTVEEDEEEEDDD--EIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  W D + +D++++D+D  E+GFV++ER++R  ++  R G GGGRSTVARCQAD CNADL+GAR YHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSRDQGWGDTVEEDEEEEDDD--EIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        CSRFH+VSEFD+TKRSCRSRLAGHNERRRK LP+F GQSST
Subjt:  CSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

A0A6J1CK81 squamosa promoter-binding protein 15.9e-4780.43Show/hide
Query:  WGDTVEEDEEEEDDD-----EIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH
        WG T EEDEEEE++D     E+GF E+ERK R A+SG R G G GRSTVARCQAD CNADLSGAR YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH
Subjt:  WGDTVEEDEEEEDDD-----EIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH

Query:  SVSEFDETKRSCRSRLAGHNERRRKSL-PEFQ-GQSST
        +VSEFDETKRSCR RLAGHNERRRKSL  EF  GQSST
Subjt:  SVSEFDETKRSCRSRLAGHNERRRKSL-PEFQ-GQSST

A0A6J1EFR3 Squamosa promoter-binding-like protein1.1e-5683.33Show/hide
Query:  MANSRDQGWGDTVEEDEEEE-----DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRF
        M +S DQGWG+ VEE+EEEE     DDDEIGFV+DERKKR A SGSR+GSGGGR++V RCQADSCN DL+GARAYHRRHKVCEFH+KAAVVILAGLEQRF
Subjt:  MANSRDQGWGDTVEEDEEEE-----DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRF

Query:  CQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        CQQCSRFHSVSEFDETKRSCR RLAGHNERRRK+LP+FQGQSST
Subjt:  CQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein1.1e-5886.62Show/hide
Query:  MANSRDQGWGDTVEEDEEEE---DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS DQGWGD VEE+EEEE   DDDE+GFVEDERKKR AVS SR+GSGGGR++VARCQADSCN DL+GARAYHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSRDQGWGDTVEEDEEEE---DDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        QCSRFHSVSEFDETKRSCR RLAGHNERRRK+LP+FQGQSST
Subjt:  QCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 105.9e-2864.95Show/hide
Query:  RKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRK
        R + G V G   G GG      RCQA+ C ADLSGA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFDE KRSCR RLA HN RRRK
Subjt:  RKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRK

P93015 Squamosa promoter-binding-like protein 35.3e-2961.21Show/hide
Query:  EEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKR
        EE+EEEE +DE  F E+E  ++    G  T S G       CQ +SC AD+S A+ YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFH++SEFDE KR
Subjt:  EEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKR

Query:  SCRSRLAGHNERRRKS
        SCR RLAGHNERRRKS
Subjt:  SCRSRLAGHNERRRKS

Q0DAE8 Squamosa promoter-binding-like protein 105.9e-2864.95Show/hide
Query:  RKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRK
        R + G V G   G GG      RCQA+ C ADLSGA+ YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH ++EFDE KRSCR RLA HN RRRK
Subjt:  RKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRK

Q38741 Squamosa promoter-binding protein 16.3e-3061.06Show/hide
Query:  EEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCR
        E+ E++D+IG  ED +K R      +  SG   ST   CQ ++C A+++ A+ YHRRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH +SEFDE KRSCR
Subjt:  EEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCR

Query:  SRLAGHNERRRKS
         RLAGHNERRRKS
Subjt:  SRLAGHNERRRKS

Q9S7A9 Squamosa promoter-binding-like protein 44.5e-2856.06Show/hide
Query:  MANSRDQGWGDTVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS
        M   R QG G   ++    E+D E    E+E   R  V GSR GS     ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCS
Subjt:  MANSRDQGWGDTVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS

Query:  RFHSVSEFDETKRSCRSRLAGHNERRRKSLPE
        RFH + EFDE KRSCR RLAGHNERRRKS  E
Subjt:  RFHSVSEFDETKRSCRSRLAGHNERRRKSLPE

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 81.2e-2867.78Show/hide
Query:  SRTGSGGGRSTVA--RCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRK
        SR G  G  ++++  RCQA+ CNADLS A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH +SEFD  KRSCR RLA HN RRRK
Subjt:  SRTGSGGGRSTVA--RCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRK

AT1G53160.1 squamosa promoter binding protein-like 43.2e-2956.06Show/hide
Query:  MANSRDQGWGDTVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS
        M   R QG G   ++    E+D E    E+E   R  V GSR GS     ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCS
Subjt:  MANSRDQGWGDTVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS

Query:  RFHSVSEFDETKRSCRSRLAGHNERRRKSLPE
        RFH + EFDE KRSCR RLAGHNERRRKS  E
Subjt:  RFHSVSEFDETKRSCRSRLAGHNERRRKSLPE

AT1G53160.2 squamosa promoter binding protein-like 43.2e-2956.06Show/hide
Query:  MANSRDQGWGDTVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS
        M   R QG G   ++    E+D E    E+E   R  V GSR GS     ++  CQ D C AD+  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCS
Subjt:  MANSRDQGWGDTVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCS

Query:  RFHSVSEFDETKRSCRSRLAGHNERRRKSLPE
        RFH + EFDE KRSCR RLAGHNERRRKS  E
Subjt:  RFHSVSEFDETKRSCRSRLAGHNERRRKSLPE

AT2G33810.1 squamosa promoter binding protein-like 33.8e-3061.21Show/hide
Query:  EEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKR
        EE+EEEE +DE  F E+E  ++    G  T S G       CQ +SC AD+S A+ YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFH++SEFDE KR
Subjt:  EEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKR

Query:  SCRSRLAGHNERRRKS
        SCR RLAGHNERRRKS
Subjt:  SCRSRLAGHNERRRKS

AT3G60030.1 squamosa promoter-binding protein-like 126.7e-2758.59Show/hide
Query:  RTGSGGG-RSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST
        +T  GGG  S    CQ D+C ADLS  + YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH + EFDE KRSCR RLAGHN+RRRK+ P+  G  ++
Subjt:  RTGSGGG-RSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDETKRSCRSRLAGHNERRRKSLPEFQGQSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACTCCAGAGATCAAGGTTGGGGAGACACAGTGGAGGAAGACGAGGAAGAAGAAGACGATGACGAAATAGGGTTTGTAGAAGATGAGAGGAAGAAGAGAGGCGC
TGTAAGTGGTAGTCGAACTGGCAGCGGAGGAGGAAGGTCAACGGTGGCGCGTTGCCAAGCCGATAGCTGCAATGCTGATCTGAGCGGCGCCAGGGCGTACCACCGCCGCC
ACAAGGTATGCGAGTTCCATGCCAAGGCGGCAGTGGTGATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGTAGGTTTCATTCGGTATCAGAGTTCGATGAG
ACAAAAAGAAGCTGCCGGAGCCGTTTGGCCGGACATAATGAACGGCGGCGAAAAAGCTTACCGGAATTCCAGGGACAATCCTCCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATAGGCTTCTCTGCAAAAATGGCGAACTCCAGAGATCAAGGTTGGGGAGACACAGTGGAGGAAGACGAGGAAGAAGAAGACGATGACGAAATAGGGTTTGTAGAAGATGA
GAGGAAGAAGAGAGGCGCTGTAAGTGGTAGTCGAACTGGCAGCGGAGGAGGAAGGTCAACGGTGGCGCGTTGCCAAGCCGATAGCTGCAATGCTGATCTGAGCGGCGCCA
GGGCGTACCACCGCCGCCACAAGGTATGCGAGTTCCATGCCAAGGCGGCAGTGGTGATTTTGGCCGGATTGGAGCAGCGCTTTTGCCAGCAGTGTAGTAGGTTTCATTCG
GTATCAGAGTTCGATGAGACAAAAAGAAGCTGCCGGAGCCGTTTGGCCGGACATAATGAACGGCGGCGAAAAAGCTTACCGGAATTCCAGGGACAATCCTCCACTTAACA
ATGACCAAAAAAATCACTAATTAATCATAATAATAATACTGATTAGTACTGTTGAAGAAGAAGAAGAAGAAGACGATGAGAGAATCAGAAGCACAGTAACCGCCATGAAA
AAGGAATTTGAAGTTAATTATGCTCTCTCTCTTCTGTCAAAAGCCAATTAATTAGTTGCCTCTTTATCAGTGGTTTTCTATGGATGTTTGTCCGTAAGCTTTGTTGTTTA
TGCCAAATTAAAGCTTTTATTATATAATATAATATAAAGGTAATGTTCAAAAGACAATGTTATGTG
Protein sequenceShow/hide protein sequence
MANSRDQGWGDTVEEDEEEEDDDEIGFVEDERKKRGAVSGSRTGSGGGRSTVARCQADSCNADLSGARAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVSEFDE
TKRSCRSRLAGHNERRRKSLPEFQGQSST