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Tan0013610 (gene) of Snake gourd v1 genome

Gene IDTan0013610
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:64716921..64717190
RNA-Seq ExpressionTan0013610
SyntenyTan0013610
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158565.1 uncharacterized protein LOC111025018 [Momordica charantia]9.0e-1142.53Show/hide
Query:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR
        M+DVVRT M MQT H++ + +W  +K E ++AR K V D L QI  L  +D+V L+ + +T++ K+  FL+VP + ++ +CM LLG+
Subjt:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR

XP_038877407.1 uncharacterized protein LOC120069696 [Benincasa hispida]2.9e-1752.87Show/hide
Query:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR
        MID++R+T++M + HM  L SWQK+KYELE  R K+V++ +Y I+GL +   V+LID+ VTDI KT CFL VP  + + YC+ LLGR
Subjt:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR

XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]2.9e-1754.02Show/hide
Query:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR
        MID+V++T++MQ+ HM  L SWQ EKYELE+   K+V++ +Y I+ L ++D V+LID+ VTDI KT CFL VP  +R+ YC+ LLGR
Subjt:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR

XP_038895773.1 uncharacterized protein LOC120083935 [Benincasa hispida]1.2e-1556.58Show/hide
Query:  QTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR
        ++ HM  L SWQKEKYELE  R K+V++ +Y I+GL + D V+LID+ VTDI KT CFL VP  +R+ YC+ LLGR
Subjt:  QTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]1.2e-1855.17Show/hide
Query:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR
        MID++R+T++MQ+ HM  L SWQKEKYELE  R K+V++ +Y I+GL + D V+ ID+ VTDI KT CFL VP  +R+ YC+ LL R
Subjt:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR

TrEMBL top hitse value%identityAlignment
A0A6J1DW73 uncharacterized protein LOC1110250184.4e-1142.53Show/hide
Query:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR
        M+DVVRT M MQT H++ + +W  +K E ++AR K V D L QI  L  +D+V L+ + +T++ K+  FL+VP + ++ +CM LLG+
Subjt:  MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGATGTTGTGCGGACAACGATGGACATGCAAACAAATCACATGCAAGGGCTTCTATCATGGCAGAAGGAGAAATATGAGTTGGAGGTTGCACGATGGAAGAAAGT
GCTCGACCTTTTGTACCAAATAGAAGGACTAACTAAGCATGATCATGTCTCGCTAATAGACATGTTTGTCACCGATATCCATAAGACATACTGCTTCCTACAGGTCCCAC
CTCAATCAAGGAGGACATATTGTATGTGTCTCCTGGGTAGGATTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGATGTTGTGCGGACAACGATGGACATGCAAACAAATCACATGCAAGGGCTTCTATCATGGCAGAAGGAGAAATATGAGTTGGAGGTTGCACGATGGAAGAAAGT
GCTCGACCTTTTGTACCAAATAGAAGGACTAACTAAGCATGATCATGTCTCGCTAATAGACATGTTTGTCACCGATATCCATAAGACATACTGCTTCCTACAGGTCCCAC
CTCAATCAAGGAGGACATATTGTATGTGTCTCCTGGGTAGGATTGGATGA
Protein sequenceShow/hide protein sequence
MIDVVRTTMDMQTNHMQGLLSWQKEKYELEVARWKKVLDLLYQIEGLTKHDHVSLIDMFVTDIHKTYCFLQVPPQSRRTYCMCLLGRIG