; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013611 (gene) of Snake gourd v1 genome

Gene IDTan0013611
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionconserved peptide upstream open reading frame 9
Genome locationLG04:71179996..71181147
RNA-Seq ExpressionTan0013611
SyntenyTan0013611
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650573.1 hypothetical protein Csa_010068 [Cucumis sativus]4.9e-20100Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
KAG6581173.1 hypothetical protein SDJN03_21175, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1898.15Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKK SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
KAG6607040.1 Uridine kinase-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1898.18Show/hide
Query:  MESKGGKKK-SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKK SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKK-SSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
KAG7017910.1 hypothetical protein SDJN02_19776, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-1898.15Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKK SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
TKY69456.1 S-adenosyl-l-methionine decarboxylase leader peptide [Spatholobus suberectus]9.3e-1996.3Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
TrEMBL top hitse value%identityAlignment
A0A0A0LAP2 Uncharacterized protein2.4e-20100Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
A0A1S4E3B1 uncharacterized protein LOC1079902741.3e-1898.15Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKK SSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
A0A444FD06 Uncharacterized protein3.8e-1892.59Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSSS SL YEAPLGYSIEDVRPHGGIKKF++AAYSNCVRKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
A0A444Z3T2 Uncharacterized protein1.7e-1894.44Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKK SSSSSSSKSLFYEAPLGYSIEDVRP+GGIKKFRSAAYSNC RKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
Q43625 Putative ORF; conserved in 5' leaders of plant SAMdC5.0e-1890.74Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSSS+ SLFYEAPLGYSIED+RP+GGIKKFRSAAYSNC RKPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 98.4e-1881.48Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESKGGKKKSSSSS   SLFYEAPLGYSIEDVRP+GGIKKF+S+ YSNC ++PS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
AT3G25572.1 conserved peptide upstream open reading frame 111.9e-1781.48Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        ME+KGGKKKSS+SSS  SLF+EAPL YSIEDVRP+GGIKKFRSAAYSN   KPS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
AT5G15948.1 conserved peptide upstream open reading frame 103.0e-1574.07Show/hide
Query:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS
        MESK G KKSSS+S   SL YEAPLGYSIEDVRP GGIKKF+S+ YSNC ++PS
Subjt:  MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGTAGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTTCGACCACACGGTGG
AATCAAGAAATTCAGATCTGCTGCTTACTCCAACTGCGTTCGAAAGCCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTCAACATTTTGTATTTATTGGTAAGTTCTCTCTTTTCTCTCTCTCGAGATGGGGTGTTTTTTTTAATCATGTTTATAAAGATTGATTCTCTGACTGCAGTCTTTGA
TTTATGTGAATATAATTGATTCTTGGCTTGAGATTTGTATTTATTTATGTACAGCCCTTACACTTGTTCTTGATTTCGGTTTGAACTCATTTTCCGGGTTTTTGTGGTTT
CCTCCGTGTCATTATGTTGATGTTGATCCGAATGGACAATCCATTCAGAAAGTCTCGAAGAAGAACTCGTTTTTATCTGCATAAATTATTTGGTTTCTAGGGCATTGTTT
TCTCTTTCTGCATCTTTTTTGGGTCTTTGATAGTGATTGCATGGCGGAGATAACGAGGGCTACCGTAAAAAAAGGGTTTACTTTTTTTGGAAGACGGAAAGAAGGGTTAC
AGTTTTGCTTTTATATAATAGAGCAATAATAGGAAGAAACATCATTTGATTTTTTTTTTGCCCGGGTTTTCTTGCATATTTTGCTTTTTAGTTTGTTTGCTTTTTCATAA
AGCAGTATTTTCATGATTGCAGATGTATGCTCCATTGTTTTTTTTAGCATAACTTTTTACTTTGGTGGGATAACGCCTTTACCATGACGCTATGATTGTCTCTTTCGTTG
GCTTTTGGTATTTTTGTATTGTTGTTCATTTGGATTATCTGTTGATAGTGTGAGTTTTTCTTTTTCAATTAACATATCTCTCTTTATGCTTTGATGTAAACGAATCGGCG
TTCCGTCTATGAATTTAGGTCGTGTGTTTTTTATACTGTATCATCTTCTTCCCTTTAACATTGAGTACTCTTCTCTCTGATTTCATTTTTGGGTGTCATCTATTTGCAGC
GAATGATTTAATGGAGTCAAAAGGTGGTAAGAAGAAGTCTAGTAGTAGTAGTAGTAGTAAATCCCTTTTCTACGAAGCTCCCCTCGGATACAGCATTGAAGACGTTCGAC
CACACGGTGGAATCAAGAAATTCAGATCTGCTGCTTACTCCAACTGCGTTCGAAAGCCATCCTGA
Protein sequenceShow/hide protein sequence
MESKGGKKKSSSSSSSKSLFYEAPLGYSIEDVRPHGGIKKFRSAAYSNCVRKPS