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Tan0013641 (gene) of Snake gourd v1 genome

Gene IDTan0013641
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Genome locationLG02:65178086..65181612
RNA-Seq ExpressionTan0013641
SyntenyTan0013641
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006406 - mRNA export from nucleus (biological process)
GO:0043248 - proteasome assembly (biological process)
GO:0008541 - proteasome regulatory particle, lid subcomplex (cellular component)
InterPro domainsIPR007834 - DSS1/SEM1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599102.1 Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2693.06Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE KAATEEVKVDLFEDDDEFEEFEI+EEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELE+NAEKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_004144232.1 protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus]1.1e-2795.83Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAA+EEVKVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_022153100.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like [Momordica charantia]3.6e-2690.28Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKA TEE+KVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_022999790.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima]7.2e-2793.06Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE+KAATEEVKVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELE+N EKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

XP_023546762.1 protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo]5.5e-2794.44Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAATEEVKVDLFEDDDEFEEFEI+EEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELE+NAEKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIG9 Uncharacterized protein5.4e-2895.83Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAA+EEVKVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A1S3CMK4 protein DSS1 HOMOLOG ON CHROMOSOME V-like5.4e-2895.83Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKAA+EEVKVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1DJN7 protein DSS1 HOMOLOG ON CHROMOSOME V-like1.7e-2690.28Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATELKA TEE+KVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFS+QL+RELENN EKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1KGK6 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like3.5e-2793.06Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE+KAATEEVKVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELE+N EKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

A0A6J1KMT1 protein DSS1 HOMOLOG ON CHROMOSOME V-like3.0e-2691.67Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MATE KA TEEVKVDLFEDDDEFEEFEINEEWEVK+ KEITQQWEDDWDDDDVNDDFSLQLKRELE+NAE+K
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

SwissProt top hitse value%identityAlignment
P60896 26S proteasome complex subunit SEM12.5e-0651.61Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   D  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

P60897 26S proteasome complex subunit SEM12.5e-0651.61Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   D  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

Q3ZBR6 26S proteasome complex subunit SEM12.5e-0651.61Show/hide
Query:  EEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK
        + V + L E+DDEFEEF   E+W   D  E    WED+WDDD+V DDFS QL+ ELE +  K
Subjt:  EEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEK

Q9FL96 Protein DSS1 HOMOLOG ON CHROMOSOME V8.1e-2175.34Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAA E VKVDLFEDDDEFEEFEINE+W E ++ KE++ QWEDDWDDDDV+DDFS QLK+ELEN +EKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

Q9XIR8 Protein DELETION OF SUV3 SUPPRESSOR 1(I)1.4e-2074.32Show/hide
Query:  MATELKAATEE-VKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAAT E VK+DLFEDDDEFEEFEINE+W E ++ KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MATELKAATEE-VKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

Arabidopsis top hitse value%identityAlignment
AT1G64750.1 deletion of SUV3 suppressor 1(I)9.8e-2274.32Show/hide
Query:  MATELKAATEE-VKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAAT E VK+DLFEDDDEFEEFEINE+W E ++ KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MATELKAATEE-VKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

AT1G64750.2 deletion of SUV3 suppressor 1(I)9.8e-2274.32Show/hide
Query:  MATELKAATEE-VKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAAT E VK+DLFEDDDEFEEFEINE+W E ++ KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Subjt:  MATELKAATEE-VKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK

AT1G64750.3 deletion of SUV3 suppressor 1(I)1.0e-1547.83Show/hide
Query:  MATELKAATEE-VKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKDSKEITQQWEDDWDDDDVNDDF
        MA E KAAT E VK+DLFEDDDEFEEFEINE                                         +W E ++ KE++QQWEDDWDDDDVNDDF
Subjt:  MATELKAATEE-VKVDLFEDDDEFEEFEINE-----------------------------------------EW-EVKDSKEITQQWEDDWDDDDVNDDF

Query:  SLQLKRELENNAEKK
        S QL++ELEN  +KK
Subjt:  SLQLKRELENNAEKK

AT5G45010.1 DSS1 homolog on chromosome V5.7e-2275.34Show/hide
Query:  MATELKAATEEVKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
        MA E KAA E VKVDLFEDDDEFEEFEINE+W E ++ KE++ QWEDDWDDDDV+DDFS QLK+ELEN +EKK
Subjt:  MATELKAATEEVKVDLFEDDDEFEEFEINEEW-EVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACAGAATTGAAAGCAGCTACTGAGGAAGTGAAAGTTGATCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGATAG
TAAAGAAATTACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTCAATGACGACTTCTCGTTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACAGAATTGAAAGCAGCTACTGAGGAAGTGAAAGTTGATCTCTTTGAGGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAGGATAG
TAAAGAAATTACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTCAATGACGACTTCTCGTTGCAGCTTAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA
Protein sequenceShow/hide protein sequence
MATELKAATEEVKVDLFEDDDEFEEFEINEEWEVKDSKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK