; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013645 (gene) of Snake gourd v1 genome

Gene IDTan0013645
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box protein SKIP28
Genome locationLG11:18201742..18203718
RNA-Seq ExpressionTan0013645
SyntenyTan0013645
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579265.1 F-box protein SKIP28, partial [Cucurbita argyrosperma subsp. sororia]2.9e-13778.75Show/hide
Query:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI
        MSEN++ PN V   GSSSPGV I AGP HEALFLVLSYLPLFELLSM AVCVSLRDAVEHDVLPWLH+VVDRPLS RL+D ILGRIARKADGRLRTLALI
Subjt:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR
        NCFKISDS LH+VVE NPLLTKLYVPGCTSLTP GV+ AV+TLSQHSHNL SLMI GIY IE  EHLEVLK +LL NRS+Q Q++QQ+Q+ + +HEHI  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR

Query:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH
        SKLL +EY  MIDV++CPKC EI RVYDCSRERCKIKQ+Q K  A CRGCS C+PRCEECGGCVD  E EEAVCAGILC+SCWLQLPKCNHCNRPYC RH
Subjt:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH

Query:  CDH-VSTSAAGFVCEVCLET
        C + VS++AAGFVCEVC+ET
Subjt:  CDH-VSTSAAGFVCEVCLET

XP_004150124.1 F-box protein SKIP28 [Cucumis sativus]2.0e-13874.49Show/hide
Query:  PPPFEAKELGISFTAAAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPL
        P    AKELG S T+AAEK+DEELT MSENQEPPNP   A         EAGP HEALF V++YLPLFELLS+SAVCVSLRDAVEHDVLPWLHIVVD  L
Subjt:  PPPFEAKELGISFTAAAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPL

Query:  SYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYL
        S RLSD  LGRIARKA GRLRTLALINCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVV AVKTLSQ SHNLK+LMI GIY IE  +HLEVL+ +L
Subjt:  SYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYL

Query:  LINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVC
        L NRS   Q+ + +Q H LYHEH+ R +LLS ++ P+IDVQICPKC++IR VYDCSRERCKIKQ  E L A CRGC  C+PRCEECGGCVD+ E+EEA+C
Subjt:  LINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVC

Query:  AGILCSSCWLQLPKCNHCNRPYCKRHCDHVSTSAAGFVCEVCLET
        + ILCSSCW QLPKCNHCNRPYCKRH D+VS+S AGFVCE+CLET
Subjt:  AGILCSSCWLQLPKCNHCNRPYCKRHCDHVSTSAAGFVCEVCLET

XP_022939676.1 F-box protein SKIP28 [Cucurbita moschata]2.5e-13678.75Show/hide
Query:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI
        MSEN + PN V   GSSSPGV I AGP HEALFLVLSYLPLFELLSM AVCVSLRDAV HDVLPWLH+VVDRPLS RL+D ILGRIARKADGRLRTLALI
Subjt:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR
        NCFKISDS LHEVVE NPLLTKLYVPGCTSLTP GV+ AV+TLSQHSHNL SLMI GIY IE  EHLEVLK +LL NRSQ  Q++QQ+Q+ + +HEHI  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR

Query:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH
        SKLL ++Y  MIDV++CPKC EI RVYDCSRERCKIKQ+Q K  A CRGCS C+PRCEECGGCVD  E EEAVCAGILC+SCWLQLPKCNHCNRPYC RH
Subjt:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH

Query:  CDHV-STSAAGFVCEVCLET
        C +V S+SAAGFVCEVC+ET
Subjt:  CDHV-STSAAGFVCEVCLET

XP_022973574.1 F-box protein SKIP28 [Cucurbita maxima]1.6e-13578.44Show/hide
Query:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI
        MSEN++ PN V   GSSSPGVGI AGP HEALFLVLSYLPLFELLSM AVCVSLRDAVEHDVLPWLH+VVDRPLS RL+D ILGRIARKADGRLRTLALI
Subjt:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR
        NCFKISDS LHEVV+ NPLLTKLYVPGCTSLTP GV+ AV+TLSQHSHNL SLMI GIY IE  EHLEVLK YLL NRSQQ Q++QQ+QQ  LYH+ I  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR

Query:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH
        SKLL +E   MIDV++CPKC E+ RVYDCSRERCKIKQ+Q K  A CRGCS C+PRCEECGGCVD  E EEAVC G+LC+SCWLQLPKCNHCN+PYC RH
Subjt:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH

Query:  CDHV-STSAAGFVCEVCLET
          +V S+SAAGFVCEVC+ET
Subjt:  CDHV-STSAAGFVCEVCLET

XP_038906463.1 F-box protein SKIP28 [Benincasa hispida]2.0e-15780.67Show/hide
Query:  MTRPESSSPFNFPPPFEAKELGISFTAAAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDV
        MT PESS         EAKELGIS T+AAEKEDE++T MSENQEP NP  AAGSS PGV IEAGP HEALFLVLSYLPLFELLSMS+VCVSLRDAVEHDV
Subjt:  MTRPESSSPFNFPPPFEAKELGISFTAAAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDV

Query:  LPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIE
        LPWLHIVVDR LS RLSD  LGRIARKA GRLRTLALINCFKISDSG HEVVEKNPLLTKLYVPGCTSLTPGGVV AVKTLSQHSHNLKSLMI GIY IE
Subjt:  LPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIE

Query:  KYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGG
          EHLEVLKC+LL NRS  LQ+++++QQH LY EHI RSKLLS+E+QP+IDVQICPKC EIR VYDCSRERCKIKQ+++ L A CRGC  C+PRCEECGG
Subjt:  KYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGG

Query:  CVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRHCDHVSTSAAGFVCEVCLET
        CVD+ E+EEAVCAGILCSSCWLQLPKCNHCNRPYC RHC +VS+S  GFVCE+CLET
Subjt:  CVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRHCDHVSTSAAGFVCEVCLET

TrEMBL top hitse value%identityAlignment
A0A0A0KSU6 F-box domain-containing protein9.9e-13974.49Show/hide
Query:  PPPFEAKELGISFTAAAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPL
        P    AKELG S T+AAEK+DEELT MSENQEPPNP   A         EAGP HEALF V++YLPLFELLS+SAVCVSLRDAVEHDVLPWLHIVVD  L
Subjt:  PPPFEAKELGISFTAAAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPL

Query:  SYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYL
        S RLSD  LGRIARKA GRLRTLALINCFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVV AVKTLSQ SHNLK+LMI GIY IE  +HLEVL+ +L
Subjt:  SYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYL

Query:  LINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVC
        L NRS   Q+ + +Q H LYHEH+ R +LLS ++ P+IDVQICPKC++IR VYDCSRERCKIKQ  E L A CRGC  C+PRCEECGGCVD+ E+EEA+C
Subjt:  LINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVC

Query:  AGILCSSCWLQLPKCNHCNRPYCKRHCDHVSTSAAGFVCEVCLET
        + ILCSSCW QLPKCNHCNRPYCKRH D+VS+S AGFVCE+CLET
Subjt:  AGILCSSCWLQLPKCNHCNRPYCKRHCDHVSTSAAGFVCEVCLET

A0A5A7TYB5 F-box protein SKIP28 isoform X12.6e-13175.86Show/hide
Query:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI
        MSENQEPPNP   A         EAGP HEALF V+SYL LFELLSMSAVCVSLRDAVEHDVLPWLHIVVD  LS RLSD  LGRIARKA GRLRTLALI
Subjt:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR
        +CFKISDSGLHEVVE NPLLTKLYVPGCTSLTP GVV AVKT SQHSHNLK+LMI GIY IE + HLEVL+ +LL NRSQ  Q+ + +Q H LYHEH+ R
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR

Query:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH
          LLS+++ P+IDVQICPKC++IR VYDCSRERCKIKQ  E L A CRGC  C+PRCEECGGCVD  E+EEA+C GI+CSSCWLQLPKCNHCNRPYCKRH
Subjt:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH

Query:  CDHVSTSAAGFVCEVCLET
         D+VS+S AGFVCE+CLET
Subjt:  CDHVSTSAAGFVCEVCLET

A0A6J1CZ11 F-box protein SKIP284.4e-12372.51Show/hide
Query:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI
        MS NQE PNP  A      GV I+AGP H+A FLVLSYLPL ELLSMSAVCVSLRDAVE D+LPW HI+VD  LS RLSD+IL RI RKADGRLRTLALI
Subjt:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR
         CFKISDSGLH+VV +NPLL KLYVPGCT LTP GVV AVKTLSQHSHNLKS+MI GIY IE  EHLEVL+ +L INRSQ     QQ+QQ +L HE+I R
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR

Query:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDE--YELEEAVCAGILCSSCWLQLPKCNHCNRPYCK
        SKLLSDEYQPMIDVQICPKC+EI RVYDCSRE CKIKQ ++KLQA CR C+ C+ RCEECGGCVDE  YE+EEAVCA  LC+SCWL+LPKCNHCN+PYC 
Subjt:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDE--YELEEAVCAGILCSSCWLQLPKCNHCNRPYCK

Query:  R--HCDH---------VSTSAAGFVCEVCLE
        R   CD          V  SA GFVCEVCLE
Subjt:  R--HCDH---------VSTSAAGFVCEVCLE

A0A6J1FGL5 F-box protein SKIP281.2e-13678.75Show/hide
Query:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI
        MSEN + PN V   GSSSPGV I AGP HEALFLVLSYLPLFELLSM AVCVSLRDAV HDVLPWLH+VVDRPLS RL+D ILGRIARKADGRLRTLALI
Subjt:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR
        NCFKISDS LHEVVE NPLLTKLYVPGCTSLTP GV+ AV+TLSQHSHNL SLMI GIY IE  EHLEVLK +LL NRSQ  Q++QQ+Q+ + +HEHI  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR

Query:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH
        SKLL ++Y  MIDV++CPKC EI RVYDCSRERCKIKQ+Q K  A CRGCS C+PRCEECGGCVD  E EEAVCAGILC+SCWLQLPKCNHCNRPYC RH
Subjt:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH

Query:  CDHV-STSAAGFVCEVCLET
        C +V S+SAAGFVCEVC+ET
Subjt:  CDHV-STSAAGFVCEVCLET

A0A6J1IEZ1 F-box protein SKIP287.8e-13678.44Show/hide
Query:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI
        MSEN++ PN V   GSSSPGVGI AGP HEALFLVLSYLPLFELLSM AVCVSLRDAVEHDVLPWLH+VVDRPLS RL+D ILGRIARKADGRLRTLALI
Subjt:  MSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALI

Query:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR
        NCFKISDS LHEVV+ NPLLTKLYVPGCTSLTP GV+ AV+TLSQHSHNL SLMI GIY IE  EHLEVLK YLL NRSQQ Q++QQ+QQ  LYH+ I  
Subjt:  NCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGR

Query:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH
        SKLL +E   MIDV++CPKC E+ RVYDCSRERCKIKQ+Q K  A CRGCS C+PRCEECGGCVD  E EEAVC G+LC+SCWLQLPKCNHCN+PYC RH
Subjt:  SKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHCNRPYCKRH

Query:  CDHV-STSAAGFVCEVCLET
          +V S+SAAGFVCEVC+ET
Subjt:  CDHV-STSAAGFVCEVCLET

SwissProt top hitse value%identityAlignment
Q9LK24 F-box protein At3g272901.1e-3034.75Show/hide
Query:  GPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHI-VVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I + D  L YR++DE L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHI-VVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEI
        V GC  L+  G+V+ ++ L S +   +KSL+  G     K E  + L   L  +    LQE++++     ++        L D+   + D++ICP C + 
Subjt:  VPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEI

Query:  RRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSC
          V+DC  + C +K      ++ CR C  C+ RC ECG C+++ E  +  C    C  C
Subjt:  RRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSC

Q9LU91 F-box protein SKIP141.2e-3532.67Show/hide
Query:  AAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARK
        +A   DE L+H    +   N      S     G E   +H A+   L +L   +LLS+S VC SL   V  D L W HI + RPL+ ++++E L  +  +
Subjt:  AAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARK

Query:  ADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQK
        A G ++ L +++C +I+D  L  VV +N  + K+ VPGCT +T  G+++ ++ L S     +K L + G++ + K  + E++    L+N   ++++  QK
Subjt:  ADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQK

Query:  QQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPK
         +   YH   G + +  D+    +D+++CPKC   + VYDC  E CK K   +K    CR CS C+ RC  CG C+ + E EE  C  +LC+ C    PK
Subjt:  QQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPK

Q9ZU90 F-box protein SKIP281.9e-5439.2Show/hide
Query:  LHEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVP
        +HE L +VL YL  LFELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VP
Subjt:  LHEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVP

Query:  GCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRV
        GC+ LTP G++  V++LS+++H L++L I+G+    K +HL  L  YL                                  +  ID+++CPKC E+R +
Subjt:  GCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRV

Query:  YDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCV--DEYELEEAVCAG--ILCSSCWLQLPKCNHCNRPYCKRHCDH-------VSTSAAGFVCEV
          CSRE C  KQ +      CRGC  C+PRC EC  C+   + E +EA C    +LC  CWL LPKC  CN+PYC  H           + S   F CE 
Subjt:  YDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCV--DEYELEEAVCAG--ILCSSCWLQLPKCNHCNRPYCKRHCDH-------VSTSAAGFVCEV

Query:  C
        C
Subjt:  C

Arabidopsis top hitse value%identityAlignment
AT2G01620.1 RNI-like superfamily protein1.3e-5539.2Show/hide
Query:  LHEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVP
        +HE L +VL YL  LFELLSM  V  SLRDA+  +   W  +V++ PLS RL+D+IL   + K+ G+L+TL L  C  +++ GL  VV+ NPL+TK+ VP
Subjt:  LHEALFLVLSYL-PLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVP

Query:  GCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRV
        GC+ LTP G++  V++LS+++H L++L I+G+    K +HL  L  YL                                  +  ID+++CPKC E+R +
Subjt:  GCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRV

Query:  YDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCV--DEYELEEAVCAG--ILCSSCWLQLPKCNHCNRPYCKRHCDH-------VSTSAAGFVCEV
          CSRE C  KQ +      CRGC  C+PRC EC  C+   + E +EA C    +LC  CWL LPKC  CN+PYC  H           + S   F CE 
Subjt:  YDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCV--DEYELEEAVCAG--ILCSSCWLQLPKCNHCNRPYCKRHCDH-------VSTSAAGFVCEV

Query:  C
        C
Subjt:  C

AT3G26000.1 Ribonuclease inhibitor8.2e-3732.67Show/hide
Query:  AAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARK
        +A   DE L+H    +   N      S     G E   +H A+   L +L   +LLS+S VC SL   V  D L W HI + RPL+ ++++E L  +  +
Subjt:  AAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDRPLSYRLSDEILGRIARK

Query:  ADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQK
        A G ++ L +++C +I+D  L  VV +N  + K+ VPGCT +T  G+++ ++ L S     +K L + G++ + K  + E++    L+N   ++++  QK
Subjt:  ADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQK

Query:  QQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPK
         +   YH   G + +  D+    +D+++CPKC   + VYDC  E CK K   +K    CR CS C+ RC  CG C+ + E EE  C  +LC+ C    PK
Subjt:  QQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPK

AT3G27290.1 RNI-like superfamily protein8.0e-3234.75Show/hide
Query:  GPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHI-VVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY
        G  H+A  LVL YL L E+L++  VC SLRD+V  +   W  I + D  L YR++DE L ++ R+A G +R L L  C  I+D GL +V+  NP LTKL 
Subjt:  GPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHI-VVDRPLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLY

Query:  VPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEI
        V GC  L+  G+V+ ++ L S +   +KSL+  G     K E  + L   L  +    LQE++++     ++        L D+   + D++ICP C + 
Subjt:  VPGCTSLTPGGVVNAVKTL-SQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQLQEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEI

Query:  RRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSC
          V+DC  + C +K      ++ CR C  C+ RC ECG C+++ E  +  C    C  C
Subjt:  RRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGACCAGAATCATCCTCGCCCTTCAATTTTCCTCCTCCATTCGAAGCTAAGGAATTAGGTATTTCCTTCACAGCGGCAGCAGAGAAGGAAGACGAAGAACTCAC
CCACATGTCGGAGAATCAGGAACCCCCAAATCCAGTGCCCGCCGCCGGCAGTTCGTCTCCCGGCGTTGGAATCGAAGCAGGGCCACTGCACGAGGCGTTATTTCTTGTAC
TGAGTTATCTTCCTCTTTTTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACACGATGTGTTACCGTGGCTTCACATCGTGGTCGATCGG
CCCTTGAGCTACCGGCTGTCCGACGAAATACTCGGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACTTTGGCTTTGATCAACTGTTTCAAGATTTCAGATTCTGG
ACTTCACGAAGTCGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGGGGGAGTTGTTAATGCAGTGAAGACTCTATCTCAAC
ATTCTCACAACTTGAAGAGCCTAATGATTGATGGCATTTACAAAATAGAGAAATATGAACACCTTGAAGTCCTCAAATGCTATCTTCTCATCAACCGATCACAACAACTA
CAGGAGAAGCAGCAGAAACAACAACATATCTTATACCACGAGCATATTGGCCGATCAAAGTTGTTGAGTGACGAATACCAGCCAATGATTGATGTACAAATCTGTCCAAA
ATGCCATGAGATAAGGAGAGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGATCAGGAGAAATTGCAGGCAGTCTGCCGGGGTTGCAGCCATTGCCTTCCAA
GGTGTGAAGAATGTGGTGGATGCGTGGATGAATATGAATTAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCCAAATGCAACCATTGT
AATAGGCCATACTGCAAGCGACATTGTGATCATGTAAGTACCTCTGCAGCTGGGTTTGTTTGTGAAGTTTGTCTTGAGACTTAG
mRNA sequenceShow/hide mRNA sequence
TCGGCATTCAGATGACCAGACCAGAATCATCCTCGCCCTTCAATTTTCCTCCTCCATTCGAAGCTAAGGAATTAGGTATTTCCTTCACAGCGGCAGCAGAGAAGGAAGAC
GAAGAACTCACCCACATGTCGGAGAATCAGGAACCCCCAAATCCAGTGCCCGCCGCCGGCAGTTCGTCTCCCGGCGTTGGAATCGAAGCAGGGCCACTGCACGAGGCGTT
ATTTCTTGTACTGAGTTATCTTCCTCTTTTTGAGCTTCTTTCCATGAGCGCAGTCTGCGTATCGCTCAGAGACGCAGTGGAACACGATGTGTTACCGTGGCTTCACATCG
TGGTCGATCGGCCCTTGAGCTACCGGCTGTCCGACGAAATACTCGGGAGAATCGCCCGGAAGGCCGATGGTCGCCTCAGAACTTTGGCTTTGATCAACTGTTTCAAGATT
TCAGATTCTGGACTTCACGAAGTCGTTGAGAAGAATCCTCTTCTCACCAAGCTTTATGTACCTGGATGCACGAGTTTGACTCCTGGGGGAGTTGTTAATGCAGTGAAGAC
TCTATCTCAACATTCTCACAACTTGAAGAGCCTAATGATTGATGGCATTTACAAAATAGAGAAATATGAACACCTTGAAGTCCTCAAATGCTATCTTCTCATCAACCGAT
CACAACAACTACAGGAGAAGCAGCAGAAACAACAACATATCTTATACCACGAGCATATTGGCCGATCAAAGTTGTTGAGTGACGAATACCAGCCAATGATTGATGTACAA
ATCTGTCCAAAATGCCATGAGATAAGGAGAGTTTATGATTGCTCAAGGGAGAGATGCAAGATAAAGCAAGATCAGGAGAAATTGCAGGCAGTCTGCCGGGGTTGCAGCCA
TTGCCTTCCAAGGTGTGAAGAATGTGGTGGATGCGTGGATGAATATGAATTAGAAGAGGCTGTATGTGCAGGTATCTTGTGTTCAAGTTGCTGGCTTCAACTTCCCAAAT
GCAACCATTGTAATAGGCCATACTGCAAGCGACATTGTGATCATGTAAGTACCTCTGCAGCTGGGTTTGTTTGTGAAGTTTGTCTTGAGACTTAGGGCGTGTATTACTTG
TATTATAATAGGAGTACTCTCCACCCCAAATATAAATGATTATAATCCAGACTAAACAATTCTACATTTAAATAATATTGTATGATTCCAACCATAATAACTTACAGATT
ACTATAACTAATAATAGTTATTATAATCTACTTGAAATGACTTTTCAAACCTTTGAGAAAAGATTTTTAAGAGTATGTTTAGAATGACTTTTTAAATGCTTAAAAATAGT
TTAAAATGACTTTTAGGGGTTGTTTGAGGTGTTGAGTGAGTTATAATAATTTGTGGGTTATTATAATTTGTGGAATCATATAATATTATTTAAAATGCAGAGTAGAATAG
TCTGAGTTATAATAGTTTGTATTATTTAGGGTGCAGAGTATTCCACAGGTTATTATAATTTGTGGCCCAAACAGACCCTTAATGTTAAAAGAATGTTTTTAAGCACTTGG
AAAAGTCGAGGGGAGATGAAATGTCATTTGAACTTAGATTAAAGCAAGAATCCCCTGTTTGCATTTTTGTATCTTGTCATCCGAACTTAGATTGAAAGTTTGAACTAAAT
ATGTACTATATCTTGCAAAATAAAAGGAAAGTTATAAAGCATATTAACCATGCAACAATGGTTAATATGATGCAACAATGGTTAGATTTAAAGTTTTCAAGTTTCGCTCT
TAAA
Protein sequenceShow/hide protein sequence
MTRPESSSPFNFPPPFEAKELGISFTAAAEKEDEELTHMSENQEPPNPVPAAGSSSPGVGIEAGPLHEALFLVLSYLPLFELLSMSAVCVSLRDAVEHDVLPWLHIVVDR
PLSYRLSDEILGRIARKADGRLRTLALINCFKISDSGLHEVVEKNPLLTKLYVPGCTSLTPGGVVNAVKTLSQHSHNLKSLMIDGIYKIEKYEHLEVLKCYLLINRSQQL
QEKQQKQQHILYHEHIGRSKLLSDEYQPMIDVQICPKCHEIRRVYDCSRERCKIKQDQEKLQAVCRGCSHCLPRCEECGGCVDEYELEEAVCAGILCSSCWLQLPKCNHC
NRPYCKRHCDHVSTSAAGFVCEVCLET