; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013656 (gene) of Snake gourd v1 genome

Gene IDTan0013656
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHIG1 domain-containing protein
Genome locationLG09:72228097..72230089
RNA-Seq ExpressionTan0013656
SyntenyTan0013656
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007667 - Hypoxia induced protein, domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON61079.1 Hypoxia induced protein, domain containing protein [Parasponia andersonii]1.8e-2982.28Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW
        M +AEPD ++FF+ KKRVRNPLVP+GAL+TAGVL AGLISFRQGNS LGQMLMR RVV QGATVALMVGTAYYYG+NPW
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW

XP_021592376.1 RING-H2 finger protein ATL48-like [Manihot esculenta]6.1e-3080.49Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS
        M   EP+L++FF+ KKRVRNPLVP+GAL+TAGVL AGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW +S
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS

XP_022767568.1 RING-H2 finger protein ATL48-like [Durio zibethinus]1.8e-2981.71Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS
        M A E  ++EF + KKRVRNPLVP+GALITAGVL AGLISFRQGNSHLGQMLMR RVVVQGATVALMVGTAYYYG+NPW  S
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS

XP_038895243.1 RING-H2 finger protein ATL48-like [Benincasa hispida]1.8e-2981.71Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS
        M++ EP+LDEFF  KKR RNPLVP+GAL+TAGVL AGLISFRQGNS LGQMLMR RVVVQGATVALMVGTA+YYGENPW  S
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS

XP_042948360.1 RING-H2 finger protein ATL48-like [Carya illinoinensis]2.3e-2982.28Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW
        M   EP+L++FF+ KKRVRNPLVPIGAL+TAGVL AGLISF+QGNSHLGQMLMR RVV QGATVALMVGTAYYYG+NPW
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW

TrEMBL top hitse value%identityAlignment
A0A1R3IG67 HIG1 domain-containing protein1.1e-2983.54Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW
        M A EP+L+E  +GKKRVRNPLVP+GAL+TAGVL AGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW

A0A2C9UJH6 HIG1 domain-containing protein3.0e-3080.49Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS
        M   EP+L++FF+ KKRVRNPLVP+GAL+TAGVL AGLISFRQGNS LGQ+LMR RVVVQGATVALMVGTAYYYGENPW +S
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS

A0A2P5CJ67 Hypoxia induced protein, domain containing protein8.6e-3082.28Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW
        M +AEPD ++FF+ KKRVRNPLVP+GAL+TAGVL AGLISFRQGNS LGQMLMR RVV QGATVALMVGTAYYYG+NPW
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW

A0A2P5F6C5 Hypoxia induced protein, domain containing protein8.6e-3082.28Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW
        M +AEPD ++FF+ KKRVRNPLVP+GAL+TAGVL AGLISFRQGNS LGQMLMR RVV QGATVALMVGTAYYYG+NPW
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPW

A0A6P6AS16 RING-H2 finger protein ATL48-like8.6e-3081.71Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS
        M A E  ++EF + KKRVRNPLVP+GALITAGVL AGLISFRQGNSHLGQMLMR RVVVQGATVALMVGTAYYYG+NPW  S
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS

SwissProt top hitse value%identityAlignment
Q4VC39 Putative HIG1 domain family member 2B4.9e-0644.83Show/hide
Query:  KKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA
        +K   NP+VPIG L TA VL  GL  F QGNS   +++M  ++  QG T+ A+++G A
Subjt:  KKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA

Q6CBQ8 Respiratory supercomplex factor 1, mitochondrial2.9e-0643.1Show/hide
Query:  PLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENP
        PLVP+G L T G L     + R GN      +   RV  QG TVA ++G A YYG++P
Subjt:  PLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENP

Q7X843 RING-H2 finger protein ATL481.7e-3075.31Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSR
        M++ EPD+++ F  KKRVRNPLVP+GAL+TAGVL AGLISFR+GNS LGQ+LMR RVVVQGATVALMVGT YYYG+NPW +
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSR

Q9BW72 HIG1 domain family member 2A, mitochondrial2.0e-0750Show/hide
Query:  KKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA
        +K   NP+VPIG L TA  L  GL SF +GNS   Q++MR R+  QG TV A+++G A
Subjt:  KKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATV-ALMVGTA

Q9CQJ1 HIG1 domain family member 2A7.5e-0748.28Show/hide
Query:  KKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGAT-VALMVGTA
        +K   NP+VPIG L TA  L  GL  F +G SH  Q++MR R+  QG T VA+++G A
Subjt:  KKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGAT-VALMVGTA

Arabidopsis top hitse value%identityAlignment
AT3G48030.1 hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein1.2e-3175.31Show/hide
Query:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSR
        M++ EPD+++ F  KKRVRNPLVP+GAL+TAGVL AGLISFR+GNS LGQ+LMR RVVVQGATVALMVGT YYYG+NPW +
Subjt:  MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGCAGAACCCGATTTGGACGAATTCTTCGATGGGAAGAAGCGCGTTAGAAATCCTCTGGTTCCTATTGGTGCACTCATCACAGCTGGAGTTCTTAGAGCAGG
GCTAATTAGTTTCCGGCAAGGCAACTCTCATTTGGGACAGATGCTAATGAGAGGTCGGGTGGTCGTCCAAGGTGCGACGGTGGCTCTTATGGTTGGCACTGCCTATTACT
ATGGGGAGAATCCATGGAGTCGAAGTTAG
mRNA sequenceShow/hide mRNA sequence
GAGAATTTTGGCCCAATTTCAAAATCCTAATTTGATTAGGCCCTTGGAGAATGATGAACATTTCTTGTCCAATTTTGATTTTCTGCATCTGATCGTGCACCAAATCGACA
CTATTTTTTGATCCTTAGGTTTCAAATAGACGTTAATTTCTTAAGGTATACGTATATTTGAAAAGATGGCTGCCGCAGAACCCGATTTGGACGAATTCTTCGATGGGAAG
AAGCGCGTTAGAAATCCTCTGGTTCCTATTGGTGCACTCATCACAGCTGGAGTTCTTAGAGCAGGGCTAATTAGTTTCCGGCAAGGCAACTCTCATTTGGGACAGATGCT
AATGAGAGGTCGGGTGGTCGTCCAAGGTGCGACGGTGGCTCTTATGGTTGGCACTGCCTATTACTATGGGGAGAATCCATGGAGTCGAAGTTAGACATCATTATAATGTA
CATAATCAGCAGCAGGAATCTGTGCATCATTTTCGAAACTGAATTTGATGGCCTCTCAGCCGATCCATGCCTAATTTTTTGTGTGTATATGAGCAGATCAAACTTCATCA
CTGAGTAGTATTGTTCATTAAGCAGAGGAATCGTCTGTCTAAGCCTCTCACAGTTTCATACATGGGAAAGAAAACCAGAGGAGGCAACTGATTATAACAAAACATGACAG
TCTCCTTCCATAGTTATTAGCTAAAGACAATTGTTGAATAGCTGCATAGCTGTCTGACAGCATTCTGAAACTGTCTGCTAGCTTAATATTGCAGCTTGGCATGACATTGA
CAACA
Protein sequenceShow/hide protein sequence
MAAAEPDLDEFFDGKKRVRNPLVPIGALITAGVLRAGLISFRQGNSHLGQMLMRGRVVVQGATVALMVGTAYYYGENPWSRS