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Tan0013670 (gene) of Snake gourd v1 genome

Gene IDTan0013670
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:79640539..79641030
RNA-Seq ExpressionTan0013670
SyntenyTan0013670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043344.1 hypothetical protein E6C27_scaffold110G002580 [Cucumis melo var. makuwa]3.2e-6274.39Show/hide
Query:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLFT-RPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQK
        M P+M KV SF +FLTSDPSPFPSLLL++LIF+FH+P CRFFS+  F   P FYYNC G+ K LCNPIP SSP+RL  GGWALR  PIALLVVVSWL+QK
Subjt:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLFT-RPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQK

Query:  DSTGVVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
        +S GV A  WGS+GC V TISEHKA  E IGGCTPWVLVG+I+LLFNMAQRQALIRHCLFVRSM
Subjt:  DSTGVVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
KAE8653331.1 hypothetical protein Csa_023242 [Cucumis sativus]2.4e-6276.22Show/hide
Query:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLF-TRPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQK
        M PIM KVSSF HFLTSDPSPFPSLLLL+LIF+FH+  CRFFS+  F   P FYYNC G+ K LCNPIPISSP+RL  GGWALR  PIALLVVVSWL+QK
Subjt:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLF-TRPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQK

Query:  DSTGVVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
        +S GV A  W S+G  V TISEHKA  E IGGCTPWVLVGMI+LLFNMAQRQALIRHCLFVRSM
Subjt:  DSTGVVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
KAG6573437.1 hypothetical protein SDJN03_27324, partial [Cucurbita argyrosperma subsp. sororia]3.2e-6273.62Show/hide
Query:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLFTRPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQKD
        M PIMPK+SS  H LTSDPSPFPSLLLL+LIF+ H+PTCRFFS+FL   PS YY+CAG S  LCNP+ +SSPKRL CGGW+LR  PIALLVVVSWLT+KD
Subjt:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLFTRPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQKD

Query:  STGVVAENWGSRGC---TVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFV
        + GV A NWGSR C   T+L + +H+  AE IGGCTPWVLVGMILLLFNMAQRQALIRHCLFV
Subjt:  STGVVAENWGSRGC---TVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFV
TrEMBL top hitse value%identityAlignment
A0A0A0LW23 Uncharacterized protein3.8e-6176.25Show/hide
Query:  MPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLF-TRPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQKDSTG
        M KVSSF HFLTSDPSPFPSLLLL+LIF+FH+  CRFFS+  F   P FYYNC G+ K LCNPIPISSP+RL  GGWALR  PIALLVVVSWL+QK+S G
Subjt:  MPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLF-TRPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQKDSTG

Query:  VVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
        V A  W S+G  V TISEHKA  E IGGCTPWVLVGMI+LLFNMAQRQALIRHCLFVRSM
Subjt:  VVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
A0A5A7TJ52 Uncharacterized protein1.5e-6274.39Show/hide
Query:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLFT-RPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQK
        M P+M KV SF +FLTSDPSPFPSLLL++LIF+FH+P CRFFS+  F   P FYYNC G+ K LCNPIP SSP+RL  GGWALR  PIALLVVVSWL+QK
Subjt:  MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLFT-RPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQK

Query:  DSTGVVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
        +S GV A  WGS+GC V TISEHKA  E IGGCTPWVLVG+I+LLFNMAQRQALIRHCLFVRSM
Subjt:  DSTGVVAENWGSRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCCATAATGCCAAAAGTCTCCTCTTTTGCACATTTTCTTACTTCCGATCCCTCACCCTTCCCTTCTCTTCTACTACTTGTTCTCATCTTCAGCTTCCATGTCCC
CACATGTCGTTTCTTCTCTCACTTCCTTTTTACTAGGCCTTCTTTCTACTACAATTGTGCTGGCCATAGTAAGCGGCTCTGCAATCCCATTCCAATATCCAGTCCCAAAA
GGTTGGCTTGCGGTGGTTGGGCTTTACGAGGGACGCCTATCGCCTTACTCGTGGTAGTGAGTTGGTTGACTCAGAAAGACTCGACAGGAGTCGTTGCTGAGAACTGGGGG
TCTCGGGGCTGCACTGTTCTGACCATTTCGGAGCACAAGGCAGGGGCTGAAGCAATTGGTGGCTGTACTCCTTGGGTTCTTGTGGGAATGATACTGCTCCTATTCAATAT
GGCTCAACGCCAGGCTCTCATTCGGCATTGCTTGTTTGTAAGAAGTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCCATAATGCCAAAAGTCTCCTCTTTTGCACATTTTCTTACTTCCGATCCCTCACCCTTCCCTTCTCTTCTACTACTTGTTCTCATCTTCAGCTTCCATGTCCC
CACATGTCGTTTCTTCTCTCACTTCCTTTTTACTAGGCCTTCTTTCTACTACAATTGTGCTGGCCATAGTAAGCGGCTCTGCAATCCCATTCCAATATCCAGTCCCAAAA
GGTTGGCTTGCGGTGGTTGGGCTTTACGAGGGACGCCTATCGCCTTACTCGTGGTAGTGAGTTGGTTGACTCAGAAAGACTCGACAGGAGTCGTTGCTGAGAACTGGGGG
TCTCGGGGCTGCACTGTTCTGACCATTTCGGAGCACAAGGCAGGGGCTGAAGCAATTGGTGGCTGTACTCCTTGGGTTCTTGTGGGAATGATACTGCTCCTATTCAATAT
GGCTCAACGCCAGGCTCTCATTCGGCATTGCTTGTTTGTAAGAAGTATGTGA
Protein sequenceShow/hide protein sequence
MTPIMPKVSSFAHFLTSDPSPFPSLLLLVLIFSFHVPTCRFFSHFLFTRPSFYYNCAGHSKRLCNPIPISSPKRLACGGWALRGTPIALLVVVSWLTQKDSTGVVAENWG
SRGCTVLTISEHKAGAEAIGGCTPWVLVGMILLLFNMAQRQALIRHCLFVRSM