; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0013672 (gene) of Snake gourd v1 genome

Gene IDTan0013672
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionextensin-like
Genome locationLG11:9545867..9546506
RNA-Seq ExpressionTan0013672
SyntenyTan0013672
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058957.1 hypothetical protein E6C27_scaffold98G001420 [Cucumis melo var. makuwa]8.3e-1155.56Show/hide
Query:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKS-PPPPPPPPKKPWPGGFT
        MG    ASY+ SLLIA   LNLP+KLTAHYIH S  ST  Y Y  PP  LPP         PPP+C QG+PPP K + K K  P   PPPP   WP  FT
Subjt:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKS-PPPPPPPPKKPWPGGFT

Query:  RKSPPPPF
         KSPPPPF
Subjt:  RKSPPPPF

KAG6578902.1 hypothetical protein SDJN03_23350, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0952.34Show/hide
Query:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFTR
        MGSL+F SY   LLI  +SL LPSKLTA+YIH              PP  PPPPS  +H         G+PPP K KYKFK+  PPPP P KPWP  F  
Subjt:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFTR

Query:  KSPPPPF
        KSPPPP+
Subjt:  KSPPPPF

XP_022939147.1 extensin-like [Cucurbita moschata]2.1e-1457.27Show/hide
Query:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQ--GSPPPPKNKYKFKSPPPPPPPPKKPWPGG
        MGSL+ +S Y+ SLLIAL+SL+LPSKL A  +H S   T P++Y+PPPP LPP PS+K+ Y PP VC+Q    PPPPKN++KFK+ PP   P   PW   
Subjt:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQ--GSPPPPKNKYKFKSPPPPPPPPKKPWPGG

Query:  FTRKSPPPPF
        FT  SPPPPF
Subjt:  FTRKSPPPPF

XP_022993352.1 extensin-like [Cucurbita maxima]1.0e-1357.41Show/hide
Query:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFT
        MGSL+ AS Y+ SLLIAL+SL+LPSKL A  +H S   T P+EY+PPPP     PS K+ Y PP VC+Q +PPPPKN++KFK+ PP   P   PW   FT
Subjt:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFT

Query:  RKSPPPPF
          SPPPPF
Subjt:  RKSPPPPF

XP_023551507.1 extensin-3-like [Cucurbita pepo subsp. pepo]1.5e-1558.72Show/hide
Query:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQ-GSPPPPKNKYKFKSPPPPPPPPKKPWPGGF
        MGSL+  S Y+ SLLIAL+SL+LPSKL A  +H S   T P++Y+PPPP LPP PS+K+ Y PP VC+Q   PPPPKN++KFK    P PP   PW   F
Subjt:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQ-GSPPPPKNKYKFKSPPPPPPPPKKPWPGGF

Query:  TRKSPPPPF
        T KSPPPPF
Subjt:  TRKSPPPPF

TrEMBL top hitse value%identityAlignment
A0A0A0KI69 Uncharacterized protein1.2e-1258.33Show/hide
Query:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKS-PPPPPPPPKKPWPGGFT
        MG    ASY+ SLLIA   LNLPSKLTAHYIH S  ST  YEY PPP  L P         PPP+C QG+PPP K + K K  P   PPPPK  WP  FT
Subjt:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKS-PPPPPPPPKKPWPGGFT

Query:  RKSPPPPF
         KSPPPPF
Subjt:  RKSPPPPF

A0A5A7UW72 Uncharacterized protein4.0e-1155.56Show/hide
Query:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKS-PPPPPPPPKKPWPGGFT
        MG    ASY+ SLLIA   LNLP+KLTAHYIH S  ST  Y Y  PP  LPP         PPP+C QG+PPP K + K K  P   PPPP   WP  FT
Subjt:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKS-PPPPPPPPKKPWPGGFT

Query:  RKSPPPPF
         KSPPPPF
Subjt:  RKSPPPPF

A0A5D3E2A1 Uncharacterized protein6.4e-0944.68Show/hide
Query:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLP-------PPPSRKIHYAPPPVCS------QGSPPPPKNKYKFKSPPPPP
        MG ++ ASY+  LL A  SLNLPSKLTAHYIH S   TK  EY+PPP  LP        PP  K  + PPP  +      +  P P K +YKFK PPPP 
Subjt:  MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLP-------PPPSRKIHYAPPPVCS------QGSPPPPKNKYKFKSPPPPP

Query:  ---------------------PPPKKPWPGGFTRKSPPPPF
                             PPPK  WP  F R SPPPPF
Subjt:  ---------------------PPPKKPWPGGFTRKSPPPPF

A0A6J1FFZ9 extensin-like1.0e-1457.27Show/hide
Query:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQ--GSPPPPKNKYKFKSPPPPPPPPKKPWPGG
        MGSL+ +S Y+ SLLIAL+SL+LPSKL A  +H S   T P++Y+PPPP LPP PS+K+ Y PP VC+Q    PPPPKN++KFK+ PP   P   PW   
Subjt:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQ--GSPPPPKNKYKFKSPPPPPPPPKKPWPGG

Query:  FTRKSPPPPF
        FT  SPPPPF
Subjt:  FTRKSPPPPF

A0A6J1JSJ5 extensin-like5.1e-1457.41Show/hide
Query:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFT
        MGSL+ AS Y+ SLLIAL+SL+LPSKL A  +H S   T P+EY+PPPP     PS K+ Y PP VC+Q +PPPPKN++KFK+ PP   P   PW   FT
Subjt:  MGSLMFAS-YVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFT

Query:  RKSPPPPF
          SPPPPF
Subjt:  RKSPPPPF

SwissProt top hitse value%identityAlignment
P06599 Extensin9.8e-0745.83Show/hide
Query:  GSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPP------------PPP
        GS M +S ++SLL+ L+SLNL S+ TA Y +S   S  P E+ PPPP   PPP       PPP   + SPPPP   YK+KSPPPP            PPP
Subjt:  GSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPP------------PPP

Query:  PKKPWPGG---FTRKSPPPP
        PK   P     +  KSPPPP
Subjt:  PKKPWPGG---FTRKSPPPP

Arabidopsis top hitse value%identityAlignment
AT1G21310.1 extensin 31.2e-0445.05Show/hide
Query:  HYIHSS------DLSTKPYEYEPPPP------SLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFTRKSPPPPF
        HY++ S        S  P  + PPPP        PPPP +  HY+PPPV    SPPPPK KY +KSPPPPP     P    +  KSPPPP+
Subjt:  HYIHSS------DLSTKPYEYEPPPP------SLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFTRKSPPPPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTTTGATGTTTGCCTCTTATGTTTTGTCCCTTCTCATTGCATTAATCTCTTTAAATCTGCCATCAAAATTGACTGCACACTACATTCACTCATCGGATCTATC
CACCAAGCCTTATGAATACGAGCCTCCGCCACCGTCATTACCACCGCCGCCGTCTAGAAAAATCCACTATGCTCCTCCTCCGGTCTGCAGCCAGGGATCACCACCGCCAC
CTAAGAACAAATACAAATTCAAGTCCCCGCCGCCGCCGCCACCGCCACCTAAGAAGCCATGGCCAGGAGGGTTCACCCGTAAATCACCTCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
GAATAATGGGGTCTTTGATGTTTGCCTCTTATGTTTTGTCCCTTCTCATTGCATTAATCTCTTTAAATCTGCCATCAAAATTGACTGCACACTACATTCACTCATCGGAT
CTATCCACCAAGCCTTATGAATACGAGCCTCCGCCACCGTCATTACCACCGCCGCCGTCTAGAAAAATCCACTATGCTCCTCCTCCGGTCTGCAGCCAGGGATCACCACC
GCCACCTAAGAACAAATACAAATTCAAGTCCCCGCCGCCGCCGCCACCGCCACCTAAGAAGCCATGGCCAGGAGGGTTCACCCGTAAATCACCTCCACCTCCTTTCTAAC
AAACACTATTAGTCTTTGCATCTTCGAGGTAAATTTTAATTAGCTTAGTTCTTTTGTTGAATATGTTAAGAATTTAGAGGGGTCAATTTTTATGGTTGGATTCGAATAAA
TTGTTAACATGGGGAGGCTTCTAATTTATATACCTCTCCGGCTACCCTTGTTTTTCTTTTACAAAATCAGAACTCTGAATGTATTTTTCCATTGATCCATTATTTTTTAG
CATTAATTTCAGCAAATCTAAAATGGATTATGTTCATCCCTTTTATTAAACGGGAATGAATTAAAAGAAAAATATATTAATTCTCTCTTG
Protein sequenceShow/hide protein sequence
MGSLMFASYVLSLLIALISLNLPSKLTAHYIHSSDLSTKPYEYEPPPPSLPPPPSRKIHYAPPPVCSQGSPPPPKNKYKFKSPPPPPPPPKKPWPGGFTRKSPPPPF